Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 3.8e-167 591.7 354 100.0
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 1.2e-38 164.9 319 38.2
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 3.4e-38 163.3 319 38.2
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 6.4e-37 159.1 135 60.0
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 8.3e-37 158.7 352 36.4
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 1.9e-36 157.5 359 40.1
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 1.9e-36 157.5 136 61.0
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 3.2e-36 156.8 342 36.8
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 4.1e-36 156.4 334 35.6
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 1.3e-34 151.4 247 40.5
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 2.3e-34 150.6 350 34.0
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 3.0e-34 150.2 127 59.8
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 5.1e-34 149.4 119 63.9
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 8.6e-34 148.7 247 42.5
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 1.5e-33 147.9 127 63.8
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 1.5e-33 147.9 127 63.8
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.5e-33 147.9 306 36.9
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 1.9e-33 147.5 131 59.5
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 3.3e-33 146.7 127 62.2
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 3.3e-33 146.7 249 43.0
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 4.3e-33 146.4 141 56.7
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 5.6e-33 146.0 125 62.4
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.6e-33 146.0 315 36.8
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 7.3e-33 145.6 148 56.8
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 9.5e-33 145.2 304 37.2
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 1.2e-32 144.8 248 41.5
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 4.7e-32 142.9 131 55.0
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.1e-31 141.7 308 35.7
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 1.4e-31 141.4 105 69.5
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 3.1e-31 140.2 122 57.4
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 2.6e-30 137.1 148 52.7
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 3.4e-30 136.7 122 61.5
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 4.4e-30 136.3 298 33.9
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 9.9e-30 135.2 114 61.4
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 9.9e-30 135.2 134 57.5
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 2.2e-29 134.0 343 34.1
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.9e-29 133.7 169 48.5
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 3.7e-29 133.3 333 34.2
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 3.7e-29 133.3 333 34.2
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 1.1e-28 131.7 121 56.2
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 1.4e-28 131.3 142 53.5
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 1.9e-28 131.0 135 52.6
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 2.4e-28 130.6 128 53.1
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 5.4e-28 129.4 258 36.4
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 1.2e-27 128.3 132 56.1
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 1.2e-27 128.3 135 51.9
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 1.2e-27 128.3 114 59.6
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.6e-27 127.9 135 53.3
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.6e-27 127.9 294 38.4
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 2.1e-27 127.5 212 41.5
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 3.5e-27 126.7 122 54.9
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 3.5e-27 126.7 170 47.1
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 3.5e-27 126.7 123 56.1
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 6.0e-27 125.9 170 47.1
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 6.0e-27 125.9 297 34.7
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 1.3e-26 124.8 145 47.6
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 2.3e-26 124.0 303 32.3
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 2.3e-26 124.0 331 33.5
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 3.0e-26 123.6 119 56.3
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.1e-26 122.9 139 51.8
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 5.1e-26 122.9 135 50.4
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 5.1e-26 122.9 296 33.8
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.1e-25 121.7 153 48.4
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 1.5e-25 121.3 135 54.1
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 4.3e-25 119.8 261 35.2
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 4.3e-25 119.8 306 35.6
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 1.2e-24 118.2 135 51.9
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.2e-24 118.2 135 51.9
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.2e-24 118.2 124 52.4
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.6e-24 117.9 318 34.3
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 2.1e-24 117.5 135 51.9
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.6e-24 116.7 279 32.6
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 6.2e-24 115.9 123 52.8
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.1e-23 115.2 140 49.3
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.4e-23 114.8 151 48.3
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.8e-23 114.4 382 29.6
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 2.4e-23 114.0 145 44.8
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.4e-23 114.0 295 35.6
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 2.4e-23 114.0 307 30.6
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 6.8e-23 112.5 123 52.8
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.2e-22 111.7 128 50.8
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 1.5e-22 111.3 131 49.6
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 2.0e-22 110.9 135 43.7
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 4.4e-22 109.8 112 54.5
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 4.4e-22 109.8 243 32.5
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 5.8e-22 109.4 120 51.7
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 9.9e-22 108.6 116 52.6
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 1.3e-21 108.2 169 41.4
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 1.3e-21 108.2 169 41.4
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 1.3e-21 108.2 169 41.4
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 1.3e-21 108.2 142 44.4
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 1.7e-21 107.8 333 30.0
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 1.7e-21 107.8 167 41.3
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 2.2e-21 107.5 144 42.4
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 2.9e-21 107.1 151 43.7
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 2.9e-21 107.1 153 40.5
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 3.8e-21 106.7 176 42.6
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 6.4e-21 105.9 127 48.0
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 1.4e-20 104.8 125 50.4
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.4e-20 104.8 122 49.2
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 1.9e-20 104.4 137 46.7
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 1.9e-20 104.4 126 48.4
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 2.4e-20 104.0 119 49.6
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 4.2e-20 103.2 131 48.1
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 1.2e-19 101.7 151 39.7
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 1.6e-19 101.3 306 31.7
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 2.1e-19 100.9 156 42.3
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.7e-19 100.5 290 33.1
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.7e-19 100.5 274 32.5
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 3.5e-19 100.1 150 43.3
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 4.6e-19 99.8 341 33.7
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 1.0e-18 98.6 153 39.2
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 1.7e-18 97.8 159 42.8
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 5.1e-18 96.3 385 31.4
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 5.1e-18 96.3 229 34.1
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 1.9e-17 94.4 122 47.5
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 3.3e-17 93.6 138 39.9
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 4.3e-17 93.2 140 42.1
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 4.7e-16 89.7 185 34.6
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 5.3e-15 86.3 59 69.5
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 9.0e-15 85.5 143 45.5
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 9.9e-14 82.0 105 48.6
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 1.3e-13 81.6 90 55.6
CDE05G3071 Ceratophyllum demersum HOM05D000186 ORTHO05D002329 7.1e-12 75.9 101 44.6
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 1.6e-11 74.7 129 40.3
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 2.7e-11 73.9 126 36.5
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 3.5e-11 73.6 121 40.5
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 2.4e-07 60.8 140 32.9
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 4.0e-07 60.1 137 34.3
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 6.9e-07 59.3 209 28.2
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 9.0e-07 58.9 86 45.3
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 1.2e-06 58.5 130 33.1
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 2.0e-06 57.8 66 51.5


User provided reference genes

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