Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03952 Aquilegia oxysepala HOM05D006176 ORTHO05D007346 9.6e-69 263.5 142 100.0
Nn8g38624 Nelumbo nucifera HOM05D006176 ORTHO05D007346 2.0e-26 122.9 111 59.5
Duzib192G0929 Durio zibethinus HOM05D006176 ORTHO05D007346 8.0e-23 110.9 107 55.1
COL.COLO4_30741 Corchorus olitorius HOM05D006176 ORTHO05D007346 2.3e-22 109.4 110 50.0
Thecc.06G122200 Theobroma cacao HOM05D006176 ORTHO05D007346 2.6e-21 105.9 108 49.1
Atru.chr1.4021 Acer truncatum HOM05D006176 ORTHO05D007346 4.4e-21 105.1 114 52.6
Cfa003523 Carpinus fangiana HOM05D006176 ORTHO05D007346 7.5e-21 104.4 97 55.7
Atru.chr1.4004 Acer truncatum HOM05D006176 ORTHO05D007346 1.3e-20 103.6 114 51.8
Haze_16045 Corylus avellana HOM05D006176 ORTHO05D007346 1.3e-20 103.6 93 54.8
TPR.G16753 Trifolium pratense HOM05D006176 ORTHO05D007346 1.7e-20 103.2 110 52.7
Gohir.A05G139800 Gossypium hirsutum HOM05D006176 ORTHO05D007346 2.8e-20 102.4 93 53.8
Medtr8g021025 Medicago truncatula HOM05D006176 ORTHO05D007346 2.8e-20 102.4 110 52.7
Gohir.D05G142000 Gossypium hirsutum HOM05D006176 ORTHO05D007346 3.7e-20 102.1 102 52.0
Gorai.009G146100 Gossypium raimondii HOM05D006176 ORTHO05D007346 3.7e-20 102.1 102 52.0
Manes.04G145900 Manihot esculenta HOM05D006176 ORTHO05D007346 3.7e-20 102.1 104 50.0
Ah.08g216920 Amaranthus hybridus HOM05D006176 ORTHO05D007346 6.3e-20 101.3 89 57.3
MBI19_g09833_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 6.3e-20 101.3 93 55.9
Ca_23393_v3 Cicer arietinum L. HOM05D006176 ORTHO05D007346 3.1e-19 99.0 110 51.8
Nitab4.5_0010678g0020 Nicotiana tabacum HOM05D006176 ORTHO05D007346 4.1e-19 98.6 98 51.0
Glyma.07G040000 Glycine max HOM05D006176 ORTHO05D007346 5.4e-19 98.2 106 53.8
MBI13_g35417_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 7.0e-19 97.8 91 49.5
Glyma.16G008800 Glycine max HOM05D006176 ORTHO05D007346 2.7e-18 95.9 119 50.4
PSO063G0286 Papaver somniferum HOM05D006176 ORTHO05D007346 4.5e-18 95.1 111 49.5
PSO421G0391 Papaver somniferum HOM05D006176 ORTHO05D007346 1.0e-17 94.0 111 48.6
CiPaw.01G217500 Carya illinoinensis HOM05D006176 ORTHO05D007346 1.3e-17 93.6 132 45.5
Phvul.010G128700 Phaseolus vulgaris HOM05D006176 ORTHO05D007346 1.3e-17 93.6 100 53.0
TWI75G0921 Tripterygium wilfordii HOM05D006176 ORTHO05D007346 2.9e-17 92.4 106 47.2
FAN09G3283 Fragaria x ananassa HOM05D006176 ORTHO05D007346 3.8e-17 92.0 103 52.4
Nitab4.5_0000255g0320 Nicotiana tabacum HOM05D006176 ORTHO05D007346 5.0e-17 91.7 97 47.4
FvH4_6g34980 Fragaria vesca HOM05D006176 ORTHO05D007346 6.5e-17 91.3 103 52.4
FAN14G1476 Fragaria x ananassa HOM05D006176 ORTHO05D007346 6.5e-17 91.3 103 52.4
Actinidia26022 Actinidia chinensis HOM05D006176 ORTHO05D007346 8.6e-17 90.9 95 49.5
Dinv37860 Davidia involucrata HOM05D006176 ORTHO05D007346 8.6e-17 90.9 80 56.2
FAN05G0172 Fragaria x ananassa HOM05D006176 ORTHO05D007346 8.6e-17 90.9 93 54.8
Gohir.A10G054700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.1e-16 90.5 110 47.3
Gohir.D10G056700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.1e-16 90.5 110 47.3
Gorai.011G060500 Gossypium raimondii HOM05D006176 ORTHO05D007346 1.1e-16 90.5 110 47.3
RcHm_v2.0_Chr2g0146001 Rosa chinensis HOM05D006176 ORTHO05D007346 1.9e-16 89.7 101 51.5
MD09G1180800 Malus domestica HOM05D006176 ORTHO05D007346 2.5e-16 89.4 102 52.9
SGA_v2.0_scaffold122G33347 Striga asiatica HOM05D006176 ORTHO05D007346 2.5e-16 89.4 90 53.3
Oeu000400.1 Olea europaea HOM05D006176 ORTHO05D007346 4.2e-16 88.6 112 47.3
Prupe.3G039100 Prunus persica HOM05D006176 ORTHO05D007346 5.5e-16 88.2 102 50.0
Sopen06g022380 Solanum pennellii HOM05D006176 ORTHO05D007346 7.2e-16 87.8 123 41.5
EL10Ac7g16423 Beta vulgaris HOM05D006176 ORTHO05D007346 1.2e-15 87.0 130 40.0
PGSC0003DMG400004890 Solanum tuberosum HOM05D006176 ORTHO05D007346 1.2e-15 87.0 101 46.5
TAR624G0214 Trochodendron aralioides HOM05D006176 ORTHO05D007346 1.6e-15 86.7 108 49.1
Dinv20423 Davidia involucrata HOM05D006176 ORTHO05D007346 2.1e-15 86.3 113 46.9
Lj3g0022886 Lotus japonicus HOM05D006176 ORTHO05D007346 2.1e-15 86.3 127 45.7
CANSAT56G3952 Cannabis sativa HOM05D006176 ORTHO05D007346 2.8e-15 85.9 92 46.7
MD17G1166900 Malus domestica HOM05D006176 ORTHO05D007346 2.8e-15 85.9 102 50.0
Migut.I01087 Erythranthe guttata HOM05D006176 ORTHO05D007346 3.6e-15 85.5 90 48.9
Solyc06g062930.1 Solanum lycopersicum HOM05D006176 ORTHO05D007346 4.7e-15 85.1 123 40.7
Lsat_1_v5_gn_4_94161 Lactuca sativa HOM05D006176 ORTHO05D007346 6.1e-15 84.7 94 50.0
SGA_v2.0_scaffold4G02067 Striga asiatica HOM05D006176 ORTHO05D007346 1.0e-14 84.0 86 50.0
vmacro22033 Vaccinium macrocarpon HOM05D006176 ORTHO05D007346 1.0e-14 84.0 123 41.5
Oeu043644.1 Olea europaea HOM05D006176 ORTHO05D007346 1.4e-14 83.6 90 47.8
Cpa.g.c40357 Carica papaya HOM05D006176 ORTHO05D007346 1.8e-14 83.2 91 51.6
Lalb_Chr04g0261121 Lupinus albus HOM05D006176 ORTHO05D007346 2.3e-14 82.8 97 51.5
Potri.001G167600 Populus trichocarpa HOM05D006176 ORTHO05D007346 2.3e-14 82.8 132 42.4
Ciclev10027265m.g Citrus clementina HOM05D006176 ORTHO05D007346 6.8e-14 81.3 72 55.6
Rhsim12G0210400 Rhododendron simsii HOM05D006176 ORTHO05D007346 1.2e-13 80.5 83 47.0
Rhsim12G0210800 Rhododendron simsii HOM05D006176 ORTHO05D007346 1.2e-13 80.5 83 47.0
Potri.003G067200 Populus trichocarpa HOM05D006176 ORTHO05D007346 2.0e-13 79.7 124 41.9
Peaxi162Scf00038g02015 Petunia axillaris HOM05D006176 ORTHO05D007346 5.7e-13 78.2 90 44.4
Migut.D00934 Erythranthe guttata HOM05D006176 ORTHO05D007346 1.3e-12 77.0 89 44.9
AL1G62840 Arabidopsis lyrata HOM05D006176 ORTHO05D007346 2.8e-12 75.9 94 45.7
PGR102G2654 Punica granatum HOM05D006176 ORTHO05D007346 2.8e-12 75.9 95 44.2
CARHR044470 Cardamine hirsuta HOM05D006176 ORTHO05D007346 3.7e-12 75.5 94 44.7
DCAR_022691 Daucus carota HOM05D006176 ORTHO05D007346 3.7e-12 75.5 109 38.5
Sed0000884 Sechium edule HOM05D006176 ORTHO05D007346 3.7e-12 75.5 100 40.0
Carub.0001s4336 Capsella rubella HOM05D006176 ORTHO05D007346 1.1e-11 73.9 94 44.7
Sc12g0010640 Simmondsia chinensis HOM05D006176 ORTHO05D007346 2.4e-11 72.8 98 38.8
MELO3C022667.2 Cucumis melo HOM05D006176 ORTHO05D007346 5.4e-11 71.6 101 39.6
AT1G54120 Arabidopsis thaliana HOM05D006176 ORTHO05D007346 7.0e-11 71.2 94 43.6
Sopen03g041090 Solanum pennellii HOM05D006176 ORTHO05D007346 1.6e-10 70.1 99 38.4
BcaB07g33263 Brassica carinata HOM05D006176 ORTHO05D007346 2.7e-10 69.3 94 42.6
ClCG07G014560 Citrullus lanatus HOM05D006176 ORTHO05D007346 2.7e-10 69.3 103 36.9
BcaB04g17025 Brassica carinata HOM05D006176 ORTHO05D007346 3.5e-10 68.9 94 40.4
A08p01210 Brassica napus HOM05D006176 ORTHO05D007346 4.5e-10 68.6 94 40.4
BraA08t32172Z Brassica rapa HOM05D006176 ORTHO05D007346 4.5e-10 68.6 94 40.4
CsaV3_3G030710 Cucumis sativus L. HOM05D006176 ORTHO05D007346 4.5e-10 68.6 101 38.6
Thhalv10011868m.g Eutrema salsugineum HOM05D006176 ORTHO05D007346 4.5e-10 68.6 93 40.9
Sp1g40570 Schrenkiella parvula HOM05D006176 ORTHO05D007346 4.5e-10 68.6 94 41.5
Aa31LG8G1260 Aethionema arabicum HOM05D006176 ORTHO05D007346 5.9e-10 68.2 100 42.0
Psat4g168640 Pisum sativum HOM05D006176 ORTHO05D007346 5.9e-10 68.2 75 50.7
C06p15630 Brassica napus HOM05D006176 ORTHO05D007346 7.8e-10 67.8 91 42.9
BraA06t23268Z Brassica rapa HOM05D006176 ORTHO05D007346 1.0e-09 67.4 94 41.5
Aa31LG10G1290 Aethionema arabicum HOM05D006176 ORTHO05D007346 1.3e-09 67.0 88 45.5
A06p00540 Brassica napus HOM05D006176 ORTHO05D007346 1.3e-09 67.0 94 41.5
Nitab4.5_0000189g0110 Nicotiana tabacum HOM05D006176 ORTHO05D007346 1.3e-09 67.0 75 48.0
BcaB02g10861 Brassica carinata HOM05D006176 ORTHO05D007346 2.3e-09 66.2 95 43.2
Lalb_Chr14g0361931 Lupinus albus HOM05D006176 ORTHO05D007346 2.3e-09 66.2 104 44.2
HanXRQChr12g0360401 Helianthus annuus HOM05D006176 ORTHO05D007346 2.9e-09 65.9 66 48.5
AT3G14060 Arabidopsis thaliana HOM05D006176 ORTHO05D007346 3.8e-09 65.5 101 41.6
CDE07G1640 Ceratophyllum demersum HOM05D006176 ORTHO05D007346 3.8e-09 65.5 139 33.1
BcaC08g43592 Brassica carinata HOM05D006176 ORTHO05D007346 5.0e-09 65.1 93 39.8
C06p09900 Brassica napus HOM05D006176 ORTHO05D007346 5.0e-09 65.1 93 39.8
BolC6t36062H Brassica oleracea HOM05D006176 ORTHO05D007346 5.0e-09 65.1 93 39.8
Lalb_Chr04g0263581 Lupinus albus HOM05D006176 ORTHO05D007346 6.6e-09 64.7 87 44.8
BcaC01g01436 Brassica carinata HOM05D006176 ORTHO05D007346 8.6e-09 64.3 94 38.3
C03p92010 Brassica napus HOM05D006176 ORTHO05D007346 8.6e-09 64.3 94 38.3
BolC3t21519H Brassica oleracea HOM05D006176 ORTHO05D007346 8.6e-09 64.3 94 38.3
BolC6t36752H Brassica oleracea HOM05D006176 ORTHO05D007346 1.1e-08 63.9 84 42.9
Sp3g12300 Schrenkiella parvula HOM05D006176 ORTHO05D007346 1.5e-08 63.5 93 44.1
THA.LOC104822658 Tarenaya hassleriana HOM05D006176 ORTHO05D007346 2.5e-08 62.8 90 38.9
QL05p004031 Quercus lobata HOM05D006176 ORTHO05D007346 3.3e-08 62.4 103 39.8
PGSC0003DMG400022907 Solanum tuberosum HOM05D006176 ORTHO05D007346 3.3e-08 62.4 115 33.9
THA.LOC104810370 Tarenaya hassleriana HOM05D006176 ORTHO05D007346 4.3e-08 62.0 90 37.8
AL3G26260 Arabidopsis lyrata HOM05D006176 ORTHO05D007346 5.6e-08 61.6 101 39.6
BcaNung04891 Brassica carinata HOM05D006176 ORTHO05D007346 5.6e-08 61.6 93 43.0
C01p50530 Brassica napus HOM05D006176 ORTHO05D007346 5.6e-08 61.6 93 43.0
Sabra03G0039100 Salix brachista HOM05D006176 ORTHO05D007346 5.6e-08 61.6 90 41.1
A01p39590 Brassica napus HOM05D006176 ORTHO05D007346 7.3e-08 61.2 93 41.9
BraA01t03999Z Brassica rapa HOM05D006176 ORTHO05D007346 7.3e-08 61.2 93 41.9
BolC1t05004H Brassica oleracea HOM05D006176 ORTHO05D007346 1.2e-07 60.5 93 41.9
Carub.0003s1365 Capsella rubella HOM05D006176 ORTHO05D007346 1.2e-07 60.5 94 42.6
PGSC0003DMG400004373 Solanum tuberosum HOM05D006176 ORTHO05D007346 1.2e-07 60.5 96 41.7
CARHR088900 Cardamine hirsuta HOM05D006176 ORTHO05D007346 1.6e-07 60.1 93 40.9
Thhalv10021772m.g Eutrema salsugineum HOM05D006176 ORTHO05D007346 2.1e-07 59.7 93 41.9
Lsat_1_v5_gn_5_136361 Lactuca sativa HOM05D006176 ORTHO05D007346 1.0e-06 57.4 91 35.2
MSTRG.10943 Avicennia marina HOM05D006176 ORTHO05D007346 2.3e-06 56.2 80 37.5
MSTRG.10944 Avicennia marina HOM05D006176 ORTHO05D007346 3.0e-06 55.8 82 42.7
SalBow6G3428 Salvia bowleyana HOM05D006176 ORTHO05D007346 3.0e-06 55.8 50 50.0
Sed0005659 Sechium edule HOM05D006176 ORTHO05D007346 6.8e-06 54.7 93 38.7
Nitab4.5_0005192g0040 Nicotiana tabacum HOM05D006176 ORTHO05D007346 8.9e-06 54.3 72 45.8


User provided reference genes

Program Settings