Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 5.0e-267 924.1 543 100.0
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 3.8e-41 173.7 614 30.1
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 9.2e-35 152.5 515 30.3
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 1.6e-34 151.8 632 28.8
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 1.0e-33 149.1 602 28.4
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.0e-33 149.1 535 31.4
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 2.9e-33 147.5 561 27.8
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.1e-32 145.6 569 28.5
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 4.7e-31 140.2 518 31.1
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 2.3e-30 137.9 557 27.8
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 6.8e-30 136.3 550 28.7
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 8.9e-30 136.0 563 28.1
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 4.4e-29 133.7 534 29.2
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 7.5e-29 132.9 551 31.0
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 1.3e-28 132.1 576 31.1
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 1.3e-28 132.1 531 30.9
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 1.7e-28 131.7 553 28.2
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 2.2e-28 131.3 577 29.5
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 3.7e-28 130.6 592 28.0
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 5.4e-27 126.7 617 26.1
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 7.8e-26 122.9 571 28.0
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 7.8e-26 122.9 552 28.8
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 1.7e-25 121.7 578 28.4
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.3e-25 121.3 576 27.1
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 8.6e-25 119.4 581 26.5
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 1.1e-24 119.0 613 26.8
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 2.5e-24 117.9 574 26.8
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 5.6e-24 116.7 544 30.5
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 7.3e-24 116.3 580 28.4
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 7.3e-24 116.3 637 26.5
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 9.5e-24 115.9 520 27.9
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 2.8e-23 114.4 583 28.6
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 4.7e-23 113.6 252 39.3
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 3.1e-22 110.9 537 27.9
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 4.0e-22 110.5 703 26.6
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 6.8e-22 109.8 541 28.3
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 1.2e-21 109.0 548 27.0
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 4.4e-21 107.1 520 26.3
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 4.4e-21 107.1 520 27.7
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 1.3e-20 105.5 643 23.6
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 2.2e-20 104.8 539 27.6
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 2.4e-19 101.3 669 24.1
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 4.1e-19 100.5 627 24.4
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 5.4e-19 100.1 234 33.8
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 5.4e-19 100.1 211 33.6
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 5.4e-19 100.1 653 24.5
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 1.2e-18 99.0 199 33.7
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 1.3e-17 95.5 518 25.3
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 1.7e-17 95.1 71 62.0
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 2.3e-17 94.7 599 25.2
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 5.0e-17 93.6 181 37.6
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 6.6e-17 93.2 74 62.2
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 1.1e-16 92.4 621 27.5
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 1.5e-16 92.0 584 25.7
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.9e-16 91.7 578 26.8
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 1.9e-16 91.7 146 45.2
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 3.3e-16 90.9 118 47.5
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 5.6e-16 90.1 339 29.5
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 5.6e-16 90.1 89 56.2
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 7.3e-16 89.7 107 49.5
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 9.5e-16 89.4 128 42.2
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 2.8e-15 87.8 71 64.8
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 8.1e-15 86.3 173 35.3
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 4.0e-14 84.0 622 29.1
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 6.8e-14 83.2 433 25.2
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 1.5e-13 82.0 89 51.7
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 2.6e-13 81.3 516 26.9
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 3.4e-13 80.9 603 24.2
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 3.4e-13 80.9 251 32.3
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 4.4e-13 80.5 293 28.3
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 4.4e-13 80.5 528 23.9
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 5.8e-13 80.1 213 32.9
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 5.8e-13 80.1 711 23.3
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 5.8e-13 80.1 513 24.6
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 7.5e-13 79.7 474 27.0
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 1.3e-12 79.0 74 55.4
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 1.7e-12 78.6 82 43.9
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 2.9e-12 77.8 65 52.3
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 4.9e-12 77.0 134 32.1
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 6.4e-12 76.6 209 29.7
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 1.1e-11 75.9 87 48.3
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 1.1e-11 75.9 295 27.8
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 1.4e-11 75.5 219 29.7
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 1.4e-11 75.5 240 28.8
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 1.9e-11 75.1 519 24.3
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 2.4e-11 74.7 95 44.2
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 5.4e-11 73.6 622 23.0
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 5.4e-11 73.6 78 43.6
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 5.4e-11 73.6 80 45.0
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 5.4e-11 73.6 196 29.1
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.2e-10 72.4 110 34.5
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.6e-10 72.0 179 33.5
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 1.6e-10 72.0 89 41.6
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 1.6e-10 72.0 89 41.6
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 1.6e-10 72.0 89 41.6
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 2.1e-10 71.6 527 23.9
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 2.7e-10 71.2 108 34.3
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 2.7e-10 71.2 518 26.3
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 3.5e-10 70.9 84 38.1
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 6.0e-10 70.1 235 27.2
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 1.0e-09 69.3 463 25.9
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 1.3e-09 68.9 75 42.7
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.3e-09 68.9 218 29.4
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 1.7e-09 68.6 91 45.1
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 3.0e-09 67.8 93 37.6
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 5.1e-09 67.0 143 35.0
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 5.1e-09 67.0 50 60.0
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 6.6e-09 66.6 238 27.3
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 8.6e-09 66.2 204 28.9
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 2.5e-08 64.7 74 44.6
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 5.6e-08 63.5 287 28.6
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 9.5e-08 62.8 230 26.5
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 2.1e-07 61.6 212 29.7
ATR0609G018 Amborella trichopoda HOM05D007504 ORTHO05D007629 2.8e-07 61.2 190 32.1
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 4.7e-07 60.5 68 47.1
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 8.1e-07 59.7 145 31.0
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 8.1e-07 59.7 168 33.3
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 1.4e-06 58.9 54 53.7


User provided reference genes

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