Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03906 Aquilegia oxysepala HOM05D007138 ORTHO05D009148 0.0e+00 1460.7 745 100.0
Nn1g08135 Nelumbo nucifera HOM05D007138 ORTHO05D009148 3.9e-68 263.8 470 39.4
TAR365G0398 Trochodendron aralioides HOM05D007138 ORTHO05D009148 3.9e-68 263.8 430 41.4
Dinv27178 Davidia involucrata HOM05D007138 ORTHO05D009148 9.9e-56 222.6 479 36.5
Haze_11677 Corylus avellana HOM05D007138 ORTHO05D009148 5.1e-52 210.3 756 31.9
Thecc.04G192200 Theobroma cacao HOM05D007138 ORTHO05D009148 1.6e-50 205.3 848 29.5
QL06p027005 Quercus lobata HOM05D007138 ORTHO05D009148 2.8e-50 204.5 839 30.0
Gorai.005G025100 Gossypium raimondii HOM05D007138 ORTHO05D009148 4.4e-48 197.2 777 29.3
CANSAT78G1621 Cannabis sativa HOM05D007138 ORTHO05D009148 7.6e-48 196.4 829 28.5
Cfa008656 Carpinus fangiana HOM05D007138 ORTHO05D009148 7.6e-48 196.4 743 29.9
AUR62020894 Chenopodium quinoa HOM05D007138 ORTHO05D009148 1.7e-47 195.3 445 37.8
RcHm_v2.0_Chr4g0412661 Rosa chinensis HOM05D007138 ORTHO05D009148 2.2e-47 194.9 813 28.8
Potri.002G236300 Populus trichocarpa HOM05D007138 ORTHO05D009148 3.8e-47 194.1 741 29.6
Gohir.A02G017700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 8.4e-47 193.0 761 29.3
Manes.01G054400 Manihot esculenta HOM05D007138 ORTHO05D009148 1.9e-46 191.8 723 29.7
MBI11_g07400_MAGBIO Magnolia biondii HOM05D007138 ORTHO05D009148 2.4e-46 191.4 769 28.9
AUR62018524 Chenopodium quinoa HOM05D007138 ORTHO05D009148 5.4e-46 190.3 436 36.2
GSVIVG01031579001 Vitis vinifera HOM05D007138 ORTHO05D009148 7.1e-46 189.9 433 35.3
Gohir.D02G019900 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.6e-45 188.7 765 29.2
Sabra02G0180000 Salix brachista HOM05D007138 ORTHO05D009148 1.6e-45 188.7 895 26.9
Hma1.2p1_1457F.1_g284650 Hydrangea macrophylla HOM05D007138 ORTHO05D009148 4.6e-45 187.2 370 38.1
FAN07G0102 Fragaria x ananassa HOM05D007138 ORTHO05D009148 6.0e-45 186.8 755 30.3
MD04G1019900 Malus domestica HOM05D007138 ORTHO05D009148 1.0e-44 186.0 714 28.0
FvH4_4g12980 Fragaria vesca HOM05D007138 ORTHO05D009148 1.3e-44 185.7 808 30.1
FAN12G4162 Fragaria x ananassa HOM05D007138 ORTHO05D009148 2.3e-44 184.9 808 30.1
SalBow2G2858 Salvia bowleyana HOM05D007138 ORTHO05D009148 2.3e-44 184.9 728 29.8
Duzib151G0530 Durio zibethinus HOM05D007138 ORTHO05D009148 3.0e-44 184.5 821 29.4
Gorai.006G224900 Gossypium raimondii HOM05D007138 ORTHO05D009148 1.1e-43 182.6 811 29.0
Gohir.A09G207700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.5e-43 182.2 812 28.1
Gohir.D09G201200 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.5e-43 182.2 805 28.0
SalBow2G0985 Salvia bowleyana HOM05D007138 ORTHO05D009148 7.3e-43 179.9 727 29.3
ECA233G0560 Erigeron canadensis HOM05D007138 ORTHO05D009148 1.3e-42 179.1 789 26.1
CiPaw.01G114100 Carya illinoinensis HOM05D007138 ORTHO05D009148 2.1e-42 178.3 949 26.4
Hund25334 Selenicereus undatus HOM05D007138 ORTHO05D009148 4.8e-42 177.2 448 34.4
TWI53G1035 Tripterygium wilfordii HOM05D007138 ORTHO05D009148 4.8e-42 177.2 717 26.8
MSTRG.9782 Avicennia marina HOM05D007138 ORTHO05D009148 1.8e-41 175.3 735 27.5
Eucgr.H02635 Eucalyptus grandis HOM05D007138 ORTHO05D009148 4.0e-41 174.1 712 29.4
Atru.chr3.1784 Acer truncatum HOM05D007138 ORTHO05D009148 2.0e-40 171.8 400 34.5
Sc13g0000510 Simmondsia chinensis HOM05D007138 ORTHO05D009148 4.5e-40 170.6 452 32.3
EL10Ac3g07428 Beta vulgaris HOM05D007138 ORTHO05D009148 9.9e-40 169.5 437 34.1
Prupe.1G169400 Prunus persica HOM05D007138 ORTHO05D009148 4.9e-39 167.2 792 26.5
Cpa.g.sc157.22 Carica papaya HOM05D007138 ORTHO05D009148 6.4e-39 166.8 450 32.0
Oeu034315.1 Olea europaea HOM05D007138 ORTHO05D009148 3.2e-38 164.5 726 27.3
Lsat_1_v5_gn_6_59601 Lactuca sativa HOM05D007138 ORTHO05D009148 4.2e-38 164.1 527 29.2
Cc03_g09210 Coffea canephora HOM05D007138 ORTHO05D009148 5.4e-38 163.7 805 28.7
Lalb_Chr13g0294671 Lupinus albus HOM05D007138 ORTHO05D009148 3.5e-37 161.0 448 31.7
Ciclev10004866m.g Citrus clementina HOM05D007138 ORTHO05D009148 3.9e-36 157.5 420 33.3
AT3G23740 Arabidopsis thaliana HOM05D007138 ORTHO05D009148 2.5e-35 154.8 462 31.6
THA.LOC104804782 Tarenaya hassleriana HOM05D007138 ORTHO05D009148 2.5e-35 154.8 508 30.7
Sopen09g035410 Solanum pennellii HOM05D007138 ORTHO05D009148 3.3e-35 154.5 907 25.8
Solyc09g092510.3 Solanum lycopersicum HOM05D007138 ORTHO05D009148 7.4e-35 153.3 904 26.3
Ca_18004_v3 Cicer arietinum L. HOM05D007138 ORTHO05D009148 4.8e-34 150.6 168 47.0
Sed0014888 Sechium edule HOM05D007138 ORTHO05D009148 6.2e-34 150.2 733 27.6
Psat0s4823g0040 Pisum sativum HOM05D007138 ORTHO05D009148 8.1e-34 149.8 372 31.7
arahy.Tifrunner.gnm1.ann1.KQUG48 Arachis hypogaea HOM05D007138 ORTHO05D009148 1.1e-33 149.4 783 26.2
Carub.0003s2404 Capsella rubella HOM05D007138 ORTHO05D009148 1.1e-33 149.4 714 26.1
arahy.Tifrunner.gnm1.ann1.JT7ZMS Arachis hypogaea HOM05D007138 ORTHO05D009148 1.4e-33 149.1 766 26.1
ClCG06G003170 Citrullus lanatus HOM05D007138 ORTHO05D009148 1.8e-33 148.7 760 25.7
PGR083G1257 Punica granatum HOM05D007138 ORTHO05D009148 1.8e-33 148.7 773 26.1
TPR.G11960 Trifolium pratense HOM05D000150 ORTHO05D000108 3.1e-33 147.9 170 50.0
Medtr8g083310 Medicago truncatula HOM05D007138 ORTHO05D009148 4.0e-33 147.5 412 32.3
Glyma.08G107400 Glycine max HOM05D007138 ORTHO05D009148 5.3e-33 147.1 209 46.9
Ah.04g149560 Amaranthus hybridus HOM05D001269 ORTHO05D001083 9.0e-33 146.4 443 29.8
Sp3g21450 Schrenkiella parvula HOM05D007138 ORTHO05D009148 3.4e-32 144.4 365 34.0
Lalb_Chr12g0205841 Lupinus albus HOM05D007138 ORTHO05D009148 7.6e-32 143.3 396 33.1
AL3G38640 Arabidopsis lyrata HOM05D007138 ORTHO05D009148 1.0e-31 142.9 358 32.7
BcaB06g26533 Brassica carinata HOM05D007138 ORTHO05D009148 1.7e-31 142.1 359 32.9
Lj4g0024791 Lotus japonicus HOM05D007138 ORTHO05D009148 1.7e-31 142.1 428 33.4
Thhalv10002448m.g Eutrema salsugineum HOM05D007138 ORTHO05D009148 2.2e-31 141.7 488 30.1
HanXRQChr02g0058451 Helianthus annuus HOM05D007138 ORTHO05D009148 4.9e-31 140.6 826 26.5
Peaxi162Scf00286g01047 Petunia axillaris HOM05D007138 ORTHO05D009148 8.4e-31 139.8 123 61.0
CsaV3_6G009270 Cucumis sativus L. HOM05D007138 ORTHO05D009148 1.4e-30 139.0 666 26.7
Glyma.05G150500 Glycine max HOM05D007138 ORTHO05D009148 2.5e-30 138.3 208 43.8
PGSC0003DMG400021869 Solanum tuberosum HOM05D007138 ORTHO05D009148 2.5e-30 138.3 844 26.5
Phvul.003G291400 Phaseolus vulgaris HOM05D007138 ORTHO05D009148 9.3e-30 136.3 211 45.0
A07p08650 Brassica napus HOM05D007138 ORTHO05D009148 1.6e-29 135.6 728 26.2
BcaC06g35563 Brassica carinata HOM05D007138 ORTHO05D009148 2.7e-29 134.8 719 26.3
Nitab4.5_0000037g0170 Nicotiana tabacum HOM05D007138 ORTHO05D009148 2.7e-29 134.8 730 27.1
CARHR099730 Cardamine hirsuta HOM05D007138 ORTHO05D009148 3.5e-29 134.4 539 28.8
BraA07t28655Z Brassica rapa HOM05D007138 ORTHO05D009148 1.0e-28 132.9 728 26.1
VMungo0251G1281 Vigna mungo HOM05D007138 ORTHO05D009148 3.9e-28 131.0 148 51.4
Aa31LG8G10280 Aethionema arabicum HOM05D007138 ORTHO05D009148 1.1e-27 129.4 120 57.5
C07p13480 Brassica napus HOM05D007138 ORTHO05D009148 9.6e-27 126.3 719 25.9
BolC7t41843H Brassica oleracea HOM05D007138 ORTHO05D009148 9.6e-27 126.3 719 25.9
MELO3C021153.2 Cucumis melo HOM05D007138 ORTHO05D009148 9.6e-27 126.3 165 47.3
Nn1g02395 Nelumbo nucifera HOM05D007138 ORTHO05D009148 1.3e-26 125.9 296 32.4
Migut.G00946 Erythranthe guttata HOM05D007138 ORTHO05D009148 2.8e-26 124.8 408 28.9
Lsat_1_v5_gn_6_58941 Lactuca sativa HOM05D007138 ORTHO05D009148 3.1e-25 121.3 537 27.9
unitig_747.g21666 Utricularia gibba HOM05D007138 ORTHO05D009148 1.5e-24 119.0 213 37.1
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.0e-20 106.3 138 42.0
Zm00001eb334100 Zea mays HOM05D007138 ORTHO05D009148 1.0e-20 106.3 134 44.0
Os01g0101800 Oryza sativa ssp. japonica HOM05D007138 ORTHO05D009148 1.8e-20 105.5 125 48.0
CDE09G0581 Ceratophyllum demersum HOM05D007138 ORTHO05D009148 6.7e-20 103.6 384 30.2
Oeu056444.1 Olea europaea HOM05D007138 ORTHO05D009148 1.4e-17 95.9 342 27.2
Zm00001eb127090 Zea mays HOM05D007138 ORTHO05D009148 9.0e-17 93.2 145 40.0
ATR0561G013 Amborella trichopoda HOM05D007138 ORTHO05D009148 1.0e-12 79.7 129 38.8
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.8e-09 68.9 123 33.3
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 9.1e-09 66.6 72 47.2


User provided reference genes

Program Settings