Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 3.8e-93 347.1 178 100.0
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 2.1e-51 208.4 178 62.4
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 2.6e-49 201.4 181 59.1
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 1.1e-47 196.1 179 58.1
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 4.1e-47 194.1 179 54.7
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 1.6e-46 192.2 177 57.6
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 2.0e-46 191.8 179 55.9
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 3.5e-46 191.0 177 57.1
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 6.6e-45 186.8 179 54.7
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 3.3e-44 184.5 179 56.4
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 5.6e-44 183.7 177 53.1
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 1.6e-43 182.2 184 55.4
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 4.7e-43 180.6 184 54.3
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 4.7e-43 180.6 179 53.1
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 8.0e-43 179.9 184 54.9
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 1.0e-42 179.5 179 54.2
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 1.4e-42 179.1 179 49.2
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 1.4e-42 179.1 181 52.5
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.8e-42 178.7 179 49.2
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 2.3e-42 178.3 179 51.4
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 5.2e-42 177.2 179 50.8
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 8.9e-42 176.4 176 53.4
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 3.4e-41 174.5 176 52.3
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 5.7e-41 173.7 177 52.5
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 7.5e-41 173.3 179 48.0
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 1.3e-40 172.6 177 53.7
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 1.7e-40 172.2 177 52.0
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 2.2e-40 171.8 160 56.9
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 3.7e-40 171.0 177 51.4
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 6.4e-40 170.2 179 52.0
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 1.1e-39 169.5 182 50.5
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 1.1e-39 169.5 178 50.0
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 7.0e-39 166.8 179 47.5
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 2.0e-38 165.2 177 48.6
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 3.5e-38 164.5 179 50.8
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 4.6e-38 164.1 176 48.3
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 1.0e-37 162.9 175 50.3
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 1.3e-37 162.5 177 50.8
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 2.3e-37 161.8 177 49.7
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 2.3e-37 161.8 178 51.7
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 1.5e-36 159.1 166 49.4
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 1.5e-36 159.1 178 48.9
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 2.5e-36 158.3 177 45.8
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 3.3e-36 157.9 177 49.7
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 3.3e-36 157.9 180 48.9
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 3.3e-36 157.9 183 47.0
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 4.3e-36 157.5 183 44.8
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 5.6e-36 157.1 177 50.8
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 5.6e-36 157.1 179 45.3
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 1.6e-35 155.6 177 50.3
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 2.1e-35 155.2 177 50.3
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 2.1e-35 155.2 183 44.8
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 2.1e-35 155.2 175 49.7
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 4.7e-35 154.1 180 47.8
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 1.4e-34 152.5 177 47.5
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 4.0e-34 151.0 177 49.2
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 4.0e-34 151.0 176 47.7
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 5.2e-34 150.6 176 49.4
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 1.5e-33 149.1 175 45.7
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 3.4e-33 147.9 177 45.8
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 4.4e-33 147.5 177 45.2
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 4.4e-33 147.5 174 46.0
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 9.8e-33 146.4 180 43.9
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 9.8e-33 146.4 178 44.9
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 9.8e-33 146.4 178 44.9
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 2.2e-32 145.2 185 44.9
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 2.9e-32 144.8 177 46.3
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 3.7e-32 144.4 184 44.6
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 1.4e-31 142.5 177 42.9
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 1.4e-31 142.5 175 42.9
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 2.0e-30 138.7 177 44.1
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 4.6e-30 137.5 151 48.3
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 6.0e-30 137.1 177 41.8
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 1.3e-29 136.0 178 42.1
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 1.7e-29 135.6 174 43.1
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 5.0e-29 134.0 178 41.0
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 8.6e-29 133.3 177 42.4
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 8.6e-29 133.3 178 42.7
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 2.5e-28 131.7 173 41.6
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 8.1e-27 126.7 175 41.1
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 3.1e-26 124.8 128 50.8
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 1.3e-21 109.4 173 39.9
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 1.1e-20 106.3 158 39.2
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 4.0e-18 97.8 91 52.7
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 5.2e-18 97.4 91 52.7
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 2.2e-16 92.0 174 38.5
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 3.0e-13 81.6 92 45.7
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 3.9e-13 81.3 154 35.7
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 5.1e-13 80.9 83 45.8
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 1.2e-11 76.3 154 35.7
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 1.1e-10 73.2 77 48.1
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 5.8e-09 67.4 64 45.3
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 7.6e-09 67.0 118 33.9
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 8.4e-08 63.5 79 41.8
TWI60G0667 Tripterygium wilfordii HOM05D007639 ORTHO05D009509 3.2e-07 61.6 156 30.1
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 1.2e-06 59.7 159 29.6
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 1.6e-06 59.3 148 30.4
CAN.G569.38 Capsicum annuum HOM05D007956 ORTHO05D010152 1.6e-06 59.3 160 30.6
PGSC0003DMG400002071 Solanum tuberosum HOM05D007956 ORTHO05D010152 2.1e-06 58.9 156 30.1
MBI16_g10987_MAGBIO Magnolia biondii HOM05D007639 ORTHO05D009509 2.7e-06 58.5 168 31.5
Duzib093G1018 Durio zibethinus HOM05D007639 ORTHO05D009509 3.5e-06 58.2 156 33.3
Solyc02g080170.1 Solanum lycopersicum HOM05D007956 ORTHO05D010152 7.8e-06 57.0 157 29.9


User provided reference genes

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