Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 5.0e-163 578.2 401 100.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.4e-80 304.3 273 61.2
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 5.9e-71 272.3 277 53.8
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.9e-69 267.3 265 56.2
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.1e-68 263.8 277 53.4
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.0e-67 261.5 302 51.7
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 5.1e-67 259.2 384 50.8
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 8.7e-67 258.5 298 51.0
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.5e-66 257.7 242 59.5
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.9e-66 257.3 303 52.5
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.9e-66 257.3 277 52.7
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 2.5e-66 256.9 265 55.5
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 2.5e-66 256.9 278 52.5
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 3.3e-66 256.5 266 51.1
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 9.7e-66 255.0 272 54.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.6e-65 254.2 292 51.4
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 2.2e-65 253.8 301 56.1
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 4.8e-65 252.7 261 55.9
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 4.8e-65 252.7 273 54.2
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 6.3e-65 252.3 273 54.2
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 6.3e-65 252.3 290 50.7
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.1e-64 251.5 267 52.4
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.8e-64 250.8 267 52.4
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 2.4e-64 250.4 244 60.7
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 2.4e-64 250.4 270 52.6
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 4.1e-64 249.6 265 52.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.9e-64 248.8 238 58.0
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 9.1e-64 248.4 275 53.5
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 9.1e-64 248.4 244 60.2
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 9.1e-64 248.4 205 62.9
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 3.4e-63 246.5 275 52.4
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.0e-62 245.0 278 53.2
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 1.3e-62 244.6 193 62.2
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.2e-62 243.8 243 58.8
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 2.9e-62 243.4 290 49.7
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.9e-62 243.4 273 51.6
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 3.8e-62 243.0 293 48.5
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 6.5e-62 242.3 280 50.0
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 1.9e-61 240.7 257 53.7
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 2.5e-61 240.4 271 50.6
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 3.2e-61 240.0 298 50.7
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.2e-61 240.0 280 51.1
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 9.4e-61 238.4 279 48.4
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 1.6e-60 237.7 292 54.8
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 2.1e-60 237.3 293 46.8
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 6.1e-60 235.7 241 61.4
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 7.9e-60 235.3 265 51.3
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.0e-59 235.0 244 58.6
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.8e-59 234.2 271 53.1
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.3e-59 233.8 270 48.9
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 2.3e-59 233.8 253 50.6
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 2.3e-59 233.8 262 52.7
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.3e-59 233.8 292 55.5
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.0e-58 230.7 304 48.4
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.6e-58 230.3 265 52.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.3e-57 228.0 265 51.7
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.7e-57 227.6 201 62.7
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 2.2e-57 227.3 272 49.3
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 3.7e-57 226.5 265 49.1
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 6.3e-57 225.7 285 53.7
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.4e-56 223.8 266 48.9
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 4.1e-56 223.0 274 47.8
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 6.9e-56 222.2 294 51.4
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 2.0e-55 220.7 294 51.7
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 2.0e-55 220.7 297 50.5
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 2.0e-55 220.7 197 59.4
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.6e-55 220.3 295 51.2
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 4.5e-55 219.5 210 61.9
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.0e-54 218.4 272 48.9
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.3e-54 218.0 274 48.9
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.9e-54 216.9 290 52.1
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.8e-54 216.5 296 43.6
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 8.5e-54 215.3 245 51.8
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.4e-53 214.5 338 42.0
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 3.2e-53 213.4 294 50.7
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 5.5e-53 212.6 183 62.3
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 7.2e-53 212.2 227 54.2
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 9.4e-53 211.8 238 52.5
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.7e-52 210.3 238 50.4
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 2.7e-52 210.3 224 61.2
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 7.9e-52 208.8 249 51.4
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 7.9e-52 208.8 194 56.7
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 3.0e-51 206.8 173 61.8
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 6.7e-51 205.7 301 48.5
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 8.8e-51 205.3 250 46.4
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.1e-50 204.9 209 53.6
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.1e-50 204.9 222 53.2
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.0e-50 204.1 207 53.1
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 2.6e-50 203.8 300 48.3
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 3.3e-50 203.4 239 51.5
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 3.7e-49 199.9 384 38.3
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.4e-48 198.0 268 45.9
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 5.3e-48 196.1 297 44.1
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 2.0e-47 194.1 246 46.3
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 1.0e-46 191.8 239 46.9
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 2.9e-46 190.3 255 45.5
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.5e-45 188.0 244 43.9
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.9e-45 187.6 166 59.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.2e-44 184.9 183 56.8
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.2e-44 184.9 198 51.5
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.7e-44 183.7 206 51.0
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.0e-43 181.8 210 49.5
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 3.8e-38 163.3 181 51.9
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.5e-37 161.4 264 40.2
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.9e-37 161.0 263 44.1
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.2e-37 160.2 204 42.6
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 7.5e-34 149.1 209 40.7
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 6.3e-33 146.0 211 39.3
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.8e-32 144.4 215 39.5
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 5.0e-30 136.3 206 41.3
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 2.1e-28 131.0 165 48.5
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.5e-18 98.2 127 45.7
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 7.0e-16 89.4 56 80.4
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.6e-10 70.9 247 29.1
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 4.4e-10 70.1 51 66.7


User provided reference genes

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