Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 4.3e-125 451.4 245 100.0
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 9.1e-59 231.1 256 55.5
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 1.2e-53 214.2 252 54.8
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 9.8e-53 211.1 219 58.4
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 2.2e-52 209.9 205 61.0
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 2.8e-52 209.5 215 58.1
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 2.4e-51 206.5 254 52.0
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 2.9e-49 199.5 207 58.5
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 5.0e-49 198.7 208 56.2
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 8.6e-49 198.0 203 58.1
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.9e-48 196.8 255 51.4
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.9e-48 196.8 214 54.7
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 4.3e-48 195.7 204 55.9
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 1.2e-47 194.1 213 54.5
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 2.1e-47 193.4 255 49.8
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 3.6e-47 192.6 224 52.7
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 3.6e-47 192.6 254 48.4
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 4.7e-47 192.2 213 54.0
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 8.0e-47 191.4 255 49.8
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 2.3e-46 189.9 206 54.9
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 3.0e-46 189.5 254 46.9
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 5.2e-46 188.7 208 55.8
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 6.8e-46 188.3 205 55.1
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 8.9e-46 188.0 256 49.6
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 1.5e-45 187.2 204 53.4
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.5e-45 187.2 246 49.2
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 2.0e-45 186.8 213 53.1
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 5.7e-45 185.3 257 47.1
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 5.7e-45 185.3 251 48.2
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 9.8e-45 184.5 260 48.1
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 3.7e-44 182.6 205 52.7
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 4.9e-44 182.2 255 46.7
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 6.4e-44 181.8 254 46.1
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 8.3e-44 181.4 205 52.2
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 8.3e-44 181.4 286 44.8
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 1.4e-43 180.6 254 45.7
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 1.8e-43 180.3 253 48.2
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 2.4e-43 179.9 255 48.2
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 2.4e-43 179.9 307 43.0
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 4.1e-43 179.1 201 53.2
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 5.4e-43 178.7 200 55.5
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 7.0e-43 178.3 207 50.7
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 7.0e-43 178.3 253 46.6
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 9.2e-43 177.9 255 46.3
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 1.6e-42 177.2 241 48.1
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 2.0e-42 176.8 201 53.7
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 2.0e-42 176.8 197 53.8
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 3.5e-42 176.0 199 55.3
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 4.6e-42 175.6 249 44.6
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 5.9e-42 175.3 201 54.2
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 1.0e-41 174.5 200 51.5
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.0e-41 174.5 202 53.0
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 1.0e-41 174.5 203 51.7
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 1.0e-41 174.5 254 44.9
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 1.3e-41 174.1 274 43.4
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 1.3e-41 174.1 218 52.3
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 1.7e-41 173.7 274 45.3
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 3.0e-41 172.9 202 52.5
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 7.3e-40 168.3 201 52.2
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 7.3e-40 168.3 196 52.0
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 7.3e-40 168.3 196 52.0
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 7.3e-40 168.3 201 47.8
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 9.5e-40 167.9 196 53.1
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 9.5e-40 167.9 196 53.1
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 1.2e-39 167.5 201 50.2
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 1.2e-39 167.5 211 47.9
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 1.2e-39 167.5 198 51.0
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 1.6e-39 167.2 199 51.3
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 2.8e-39 166.4 205 51.2
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 2.8e-39 166.4 199 50.3
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 2.8e-39 166.4 252 44.8
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 3.6e-39 166.0 193 49.7
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 4.7e-39 165.6 212 49.1
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 1.1e-38 164.5 255 45.9
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 1.4e-38 164.1 250 42.8
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 2.3e-38 163.3 212 48.1
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 2.3e-38 163.3 254 46.1
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 3.1e-38 162.9 210 49.0
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.2e-38 162.2 211 48.8
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 5.2e-38 162.2 194 52.1
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 6.8e-38 161.8 184 51.1
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.2e-37 161.0 195 51.3
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 1.5e-37 160.6 242 45.9
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 9.8e-37 157.9 242 45.5
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 2.2e-36 156.8 200 50.5
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 3.7e-36 156.0 251 43.0
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 1.1e-35 154.5 199 47.2
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 1.4e-35 154.1 200 45.0
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 1.4e-35 154.1 250 44.0
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.4e-35 153.3 212 46.2
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 4.1e-35 152.5 199 47.2
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 1.2e-34 151.0 200 48.0
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 3.5e-34 149.4 212 45.3
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 6.0e-34 148.7 203 45.3
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 6.0e-34 148.7 194 46.4
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 1.0e-33 147.9 200 49.0
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 1.0e-33 147.9 199 46.2
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 1.1e-32 144.4 235 42.6
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 1.1e-32 144.4 250 39.6
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.3e-32 142.9 195 50.3
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 7.3e-32 141.7 212 46.7
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 1.2e-31 141.0 206 41.7
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 2.1e-31 140.2 192 44.3
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 4.7e-31 139.0 196 42.9
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 8.1e-31 138.3 193 43.5
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 8.1e-31 138.3 194 43.3
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 8.1e-31 138.3 196 43.9
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 8.1e-31 138.3 200 41.0
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 1.4e-30 137.5 203 45.8
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 2.3e-30 136.7 202 42.1
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 6.8e-30 135.2 197 42.6
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 1.2e-29 134.4 191 45.0
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 2.0e-29 133.7 170 47.1
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 7.5e-29 131.7 179 50.3
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 8.3e-28 128.3 181 45.3
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 2.4e-27 126.7 241 42.3
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 7.1e-27 125.2 245 40.8
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 6.0e-26 122.1 172 45.9
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 1.0e-25 121.3 198 43.4
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 6.6e-25 118.6 247 38.1
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.5e-24 117.5 165 44.8
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 1.9e-24 117.1 259 36.7
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 2.5e-24 116.7 200 41.5
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 3.3e-24 116.3 166 46.4
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 2.1e-23 113.6 187 44.9
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 6.2e-23 112.1 188 41.5
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.4e-22 110.9 102 64.7
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 1.4e-22 110.9 199 40.2
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 4.0e-22 109.4 113 55.8
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 5.2e-22 109.0 99 64.6
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 6.8e-22 108.6 209 40.2
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 2.6e-21 106.7 186 40.3
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 6.4e-20 102.1 171 45.0
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 1.6e-18 97.4 244 34.4
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 6.0e-18 95.5 154 44.8
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 2.3e-17 93.6 239 32.6
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 3.9e-17 92.8 119 47.9
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.6e-13 80.1 110 47.3
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 4.9e-12 75.9 201 35.8
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 1.9e-11 73.9 152 35.5
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 9.3e-11 71.6 117 41.9
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 4.6e-10 69.3 117 40.2
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.3e-09 67.8 40 87.5
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.3e-09 67.8 40 87.5
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 5.1e-09 65.9 96 41.7
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 1.1e-08 64.7 50 64.0
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-08 64.3 93 39.8
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.1e-07 60.5 83 44.6
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 3.6e-07 59.7 93 37.6
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-06 57.8 90 41.1
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-06 57.8 83 42.2


User provided reference genes

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