Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 3.0e-67 258.8 178 100.0
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 2.5e-37 159.5 128 71.1
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 8.7e-35 151.0 125 71.2
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 2.5e-34 149.4 130 63.1
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 2.2e-33 146.4 130 60.8
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 2.8e-33 146.0 121 71.9
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 3.7e-33 145.6 127 62.2
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 1.1e-32 144.1 125 60.8
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 1.8e-32 143.3 114 71.1
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 1.8e-32 143.3 116 66.4
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 2.4e-32 142.9 127 61.4
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.4e-32 142.9 116 65.5
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.4e-32 142.9 116 65.5
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.1e-32 142.5 116 65.5
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 3.1e-32 142.5 116 63.8
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 6.9e-32 141.4 125 68.8
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 9.0e-32 141.0 132 56.8
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 9.0e-32 141.0 114 66.7
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 1.2e-31 140.6 132 59.1
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.2e-31 140.6 127 61.4
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 1.5e-31 140.2 135 59.3
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.6e-31 139.4 114 65.8
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 4.5e-31 138.7 114 63.2
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 4.5e-31 138.7 126 57.9
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 4.5e-31 138.7 116 73.3
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 4.5e-31 138.7 116 73.3
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 5.9e-31 138.3 122 57.4
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 5.9e-31 138.3 122 57.4
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 5.9e-31 138.3 122 57.4
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 5.9e-31 138.3 118 74.6
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 5.9e-31 138.3 114 64.0
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 7.6e-31 137.9 126 57.1
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 7.6e-31 137.9 127 66.1
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 1.0e-30 137.5 126 57.1
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 1.0e-30 137.5 122 59.0
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 1.3e-30 137.1 127 58.3
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 1.7e-30 136.7 122 56.6
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 1.7e-30 136.7 125 59.2
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 1.7e-30 136.7 122 57.4
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 2.9e-30 136.0 115 63.5
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 2.9e-30 136.0 122 61.5
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 2.9e-30 136.0 127 56.7
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 3.8e-30 135.6 127 57.5
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 5.0e-30 135.2 127 59.1
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 5.0e-30 135.2 131 55.7
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 5.0e-30 135.2 127 56.7
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 6.5e-30 134.8 123 56.1
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 6.5e-30 134.8 125 67.2
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 8.5e-30 134.4 131 58.0
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 1.1e-29 134.0 114 62.3
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 1.4e-29 133.7 123 70.7
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 1.9e-29 133.3 122 56.6
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 2.5e-29 132.9 126 55.6
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 2.5e-29 132.9 123 60.2
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 2.5e-29 132.9 131 64.1
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 3.2e-29 132.5 126 55.6
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 3.2e-29 132.5 116 61.2
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 7.2e-29 131.3 118 61.0
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 7.2e-29 131.3 116 62.1
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 9.3e-29 131.0 130 54.6
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.6e-28 130.2 114 64.9
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.6e-28 130.2 117 58.1
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 1.6e-28 130.2 114 60.5
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 2.1e-28 129.8 121 55.4
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 2.1e-28 129.8 132 55.3
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 7.9e-28 127.9 121 58.7
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 1.3e-27 127.1 117 63.2
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.8e-27 126.7 125 52.8
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 2.3e-27 126.3 128 61.7
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 3.9e-27 125.6 124 63.7
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 6.7e-27 124.8 126 65.9
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 6.7e-27 124.8 118 57.6
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 8.8e-27 124.4 118 56.8
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 8.8e-27 124.4 139 52.5
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 1.5e-26 123.6 127 53.5
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 3.3e-26 122.5 127 54.3
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 4.8e-25 118.6 104 61.5
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 8.2e-25 117.9 104 62.5
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 1.8e-24 116.7 175 49.7
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 2.4e-24 116.3 122 54.1
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 2.4e-24 116.3 125 49.6
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 2.4e-24 116.3 104 66.3
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 4.5e-23 112.1 116 52.6
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 1.3e-22 110.5 116 51.7
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.4e-21 107.1 139 43.9
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 7.2e-21 104.8 127 45.7
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 1.0e-19 100.9 79 68.4
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 2.0e-15 86.7 66 68.2
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 3.4e-15 85.9 56 76.8
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 4.5e-15 85.5 56 78.6
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 4.2e-13 79.0 119 47.1
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 1.0e-11 74.3 78 52.6
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 7.4e-10 68.2 55 63.6
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 2.2e-09 66.6 89 48.3
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 1.6e-07 60.5 69 47.8
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 1.0e-06 57.8 128 35.9


User provided reference genes

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