Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 2.3e-48 195.3 102 100.0
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 3.0e-48 194.9 102 99.0
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.4e-37 158.7 102 77.5
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 3.5e-36 154.8 102 77.5
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.1e-34 149.8 101 67.3
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 6.1e-33 144.1 101 66.3
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 9.8e-31 136.7 100 70.0
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 9.8e-31 136.7 100 70.0
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 7.0e-29 130.6 101 61.4
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 1.6e-28 129.4 100 57.0
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.0e-28 129.0 102 61.8
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 5.9e-28 127.5 102 60.8
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 1.7e-27 125.9 101 56.4
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 1.7e-27 125.9 101 57.4
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 1.7e-27 125.9 101 57.4
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 1.7e-27 125.9 102 63.7
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 2.3e-27 125.6 102 60.8
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 2.3e-27 125.6 97 54.6
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 2.9e-27 125.2 101 56.4
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 2.9e-27 125.2 100 60.0
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.9e-27 125.2 100 60.0
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.9e-27 125.2 100 60.0
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.9e-27 125.2 100 60.0
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.9e-27 125.2 101 55.4
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 3.8e-27 124.8 101 56.4
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 3.8e-27 124.8 100 57.0
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 8.6e-27 123.6 101 55.4
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 8.6e-27 123.6 101 59.4
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.1e-26 123.2 101 59.4
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 1.5e-26 122.9 101 60.4
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.5e-26 122.9 101 56.4
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 1.5e-26 122.9 101 55.4
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.9e-26 122.5 100 60.0
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 2.5e-26 122.1 102 57.8
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 3.3e-26 121.7 101 54.5
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 4.2e-26 121.3 101 55.4
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 4.2e-26 121.3 102 56.9
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 5.5e-26 120.9 100 55.0
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.6e-25 119.4 100 56.0
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 2.8e-25 118.6 97 55.7
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 2.8e-25 118.6 101 57.4
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 4.7e-25 117.9 101 59.4
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 4.7e-25 117.9 101 59.4
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 1.0e-24 116.7 101 53.5
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.0e-24 116.7 101 52.5
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 8.9e-24 113.6 103 57.3
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 1.5e-23 112.8 100 53.0
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 7.5e-23 110.5 100 51.0
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.3e-22 109.8 101 54.5
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 1.1e-21 106.7 102 53.9
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.4e-21 106.3 103 58.3
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 1.6e-20 102.8 101 53.5
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.6e-20 102.8 102 53.9
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 3.5e-20 101.7 101 49.5
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 5.9e-20 100.9 101 52.5
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 5.9e-20 100.9 102 51.0
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 5.9e-20 100.9 102 52.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 5.9e-20 100.9 102 51.0
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 5.9e-20 100.9 93 51.6
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 1.7e-19 99.4 100 50.0
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 1.7e-19 99.4 101 51.5
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 2.3e-19 99.0 102 47.1
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 2.3e-19 99.0 100 50.0
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.3e-19 99.0 102 49.0
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 3.8e-19 98.2 101 50.5
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 5.0e-19 97.8 88 56.8
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 8.6e-19 97.1 100 49.0
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 8.6e-19 97.1 100 49.0
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 1.1e-18 96.7 101 49.5
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.9e-18 95.9 98 56.1
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.6e-17 92.8 105 47.6
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 2.8e-17 92.0 98 46.9
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 3.6e-17 91.7 84 48.8
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 6.1e-17 90.9 105 46.7
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 1.4e-16 89.7 106 45.3
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.3e-16 89.0 98 50.0
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 4.0e-16 88.2 101 51.5
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 6.8e-16 87.4 67 58.2
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 6.8e-16 87.4 101 44.6
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 6.8e-16 87.4 111 41.4
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 6.8e-16 87.4 111 41.4
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 6.8e-16 87.4 106 44.3
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 6.8e-16 87.4 106 44.3
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 6.8e-16 87.4 106 44.3
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 1.2e-15 86.7 92 47.8
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.2e-15 86.7 93 50.5
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 1.5e-15 86.3 105 49.5
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 5.8e-15 84.3 71 57.7
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 4.9e-14 81.3 63 55.6
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 6.4e-14 80.9 101 42.6
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 8.3e-14 80.5 100 45.0
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 2.0e-12 75.9 60 63.3
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 4.6e-12 74.7 88 47.7
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 1.3e-11 73.2 101 41.6
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 8.6e-11 70.5 76 50.0
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 8.6e-11 70.5 70 51.4
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 8.6e-11 70.5 106 37.7
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.5e-10 69.7 62 53.2
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.5e-10 69.7 99 37.4
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.9e-10 69.3 99 37.4
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 7.3e-10 67.4 53 60.4
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 7.3e-10 67.4 101 41.6
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 7.3e-10 67.4 103 37.9
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.2e-09 66.6 114 36.0
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.4e-08 63.2 107 40.2
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 4.9e-06 54.7 80 37.5
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 6.4e-06 54.3 102 35.3
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 8.3e-06 53.9 107 38.3


User provided reference genes

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