Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 0.0e+00 1386.3 704 100.0
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 0.0e+00 1336.6 704 97.0
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 3.2e-250 868.6 713 62.6
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 1.4e-232 810.1 712 58.6
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 4.1e-229 798.5 713 59.2
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 6.2e-225 784.6 709 56.8
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 7.0e-221 771.2 710 57.2
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 2.8e-217 759.2 715 55.4
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.1e-216 757.3 711 55.4
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 4.0e-216 755.4 708 55.9
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 5.2e-216 755.0 714 54.9
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 7.5e-215 751.1 716 53.9
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 3.7e-214 748.8 711 55.0
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 5.4e-213 745.0 709 54.4
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 1.2e-212 743.8 711 54.3
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 7.8e-212 741.1 760 52.8
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 3.0e-211 739.2 714 54.1
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 1.2e-209 733.8 713 53.9
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.6e-209 733.4 731 53.2
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 7.6e-207 724.5 731 52.7
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 2.2e-206 723.0 687 54.3
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 1.0e-203 714.1 710 53.9
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 1.6e-201 706.8 708 53.2
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 5.3e-200 701.8 708 51.4
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.9e-198 696.0 710 51.7
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 2.9e-198 696.0 709 51.2
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 4.9e-198 695.3 716 51.1
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 6.4e-198 694.9 710 51.5
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 8.4e-198 694.5 704 51.6
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 1.4e-197 693.7 707 51.8
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 7.1e-197 691.4 709 50.9
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 2.1e-196 689.9 712 49.9
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 8.7e-195 684.5 706 50.4
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 9.6e-194 681.0 713 50.5
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 2.1e-193 679.9 710 50.3
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 3.6e-193 679.1 706 50.1
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 8.1e-193 677.9 711 49.8
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 1.4e-192 677.2 719 50.9
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 1.8e-192 676.8 711 50.1
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 3.1e-192 676.0 704 50.0
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 4.0e-192 675.6 677 53.3
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 1.2e-191 674.1 708 50.3
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 1.5e-191 673.7 702 50.9
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.5e-191 673.7 708 51.0
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 1.5e-191 673.7 713 50.1
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 2.0e-191 673.3 702 50.1
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 4.5e-191 672.2 714 49.0
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 1.7e-190 670.2 700 50.1
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 2.4e-189 666.4 712 49.2
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 7.1e-189 664.8 704 50.6
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 3.0e-187 659.4 714 48.7
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 3.3e-186 656.0 711 48.2
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 3.3e-186 656.0 713 50.4
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 2.1e-185 653.3 710 50.6
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 8.1e-185 651.4 712 48.0
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 2.6e-183 646.4 710 49.6
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 5.5e-181 638.6 711 47.5
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 5.5e-181 638.6 670 50.9
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 9.3e-181 637.9 708 49.6
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.2e-180 637.5 711 49.5
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 1.8e-179 633.6 725 47.4
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 8.7e-179 631.3 715 47.3
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 1.5e-178 630.6 612 53.6
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 6.2e-177 625.2 597 56.6
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 8.2e-177 624.8 707 48.2
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 1.2e-175 620.9 695 48.3
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 1.1e-173 614.4 713 46.6
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 1.9e-173 613.6 725 45.9
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 1.6e-172 610.5 702 48.0
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 6.7e-171 605.1 525 57.3
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 1.5e-170 604.0 695 46.8
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.1e-168 597.8 746 45.2
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 9.0e-168 594.7 521 57.8
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 7.7e-167 591.7 699 46.9
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 1.6e-164 583.9 616 49.4
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 8.8e-155 551.6 522 53.3
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 9.7e-154 548.1 468 57.9
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 1.7e-153 547.4 535 55.7
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 4.8e-153 545.8 600 50.2
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 5.0e-142 509.2 452 57.1
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 2.7e-140 503.4 463 56.2
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 1.3e-137 494.6 408 59.1
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 4.5e-135 486.1 550 47.1
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 6.5e-134 482.3 654 44.5
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 1.5e-133 481.1 448 57.1
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 2.3e-131 473.8 476 52.5
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 5.4e-128 462.6 647 42.0
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 7.7e-127 458.8 675 41.3
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 1.3e-126 458.0 562 45.4
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 7.0e-120 435.6 496 48.2
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 4.3e-117 426.4 542 44.3
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 3.4e-114 416.8 497 45.5
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.3e-113 414.8 440 51.6
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 9.2e-104 382.1 839 33.1
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.6e-95 354.8 387 48.6
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 2.8e-92 344.0 701 34.2
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 2.8e-92 344.0 701 34.4
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 9.9e-90 335.5 728 31.9
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 1.1e-88 332.0 772 30.7
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.3e-78 298.5 415 41.0
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 4.3e-77 293.5 238 60.5
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 1.3e-73 282.0 599 31.7
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 2.4e-72 277.7 710 30.6
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 1.4e-67 261.9 208 62.0
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 6.2e-60 236.5 187 61.0
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 7.7e-50 203.0 318 40.3
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.2e-47 195.7 160 56.2
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 6.7e-38 163.3 217 42.4
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 7.4e-37 159.8 131 55.7
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 8.5e-33 146.4 147 50.3
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 4.7e-31 140.6 310 32.3
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 5.7e-29 133.7 144 50.7
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 2.8e-28 131.3 237 37.1
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 3.7e-28 131.0 89 66.3
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 3.1e-27 127.9 191 39.3
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.0e-26 125.2 247 33.6
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 8.5e-25 119.8 209 36.8
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 1.1e-24 119.4 110 56.4
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 3.0e-14 84.7 59 62.7
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 3.7e-12 77.8 133 36.1
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 2.7e-10 71.6 49 63.3
Rhsim12G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-08 65.5 69 50.7
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 2.5e-08 65.1 47 66.0
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 3.3e-08 64.7 89 37.1
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.3e-08 64.3 62 51.6
Solyc05g150129.1 Solanum lycopersicum HOM05D006558 ORTHO05D008424 1.4e-06 59.3 48 54.2
Sopen05g017900 Solanum pennellii HOM05D028470 ORTHO05D037706 1.8e-06 58.9 73 42.5


User provided reference genes

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