Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03797 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.8e-64 248.4 123 100.0
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.1e-40 169.1 115 77.4
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 1.0e-18 97.1 106 49.1
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 1.4e-18 96.7 106 50.0
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 2.3e-18 95.9 106 50.0
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 2.3e-18 95.9 106 49.1
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 5.1e-18 94.7 106 48.1
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 1.1e-17 93.6 105 48.6
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 3.3e-17 92.0 106 48.1
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 4.3e-17 91.7 106 45.3
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 5.7e-17 91.3 106 46.2
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 5.7e-17 91.3 114 45.6
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 5.7e-17 91.3 106 45.3
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 5.7e-17 91.3 106 45.3
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 1.7e-16 89.7 106 42.5
Nitab4.5_0002392g0020 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.7e-16 89.7 106 45.3
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 1.7e-16 89.7 125 42.4
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 1.7e-16 89.7 103 45.6
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 2.8e-16 89.0 106 46.2
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 6.3e-16 87.8 105 45.7
Nitab4.5_0000139g0150 Nicotiana tabacum HOM05D005682 ORTHO05D007050 6.3e-16 87.8 106 44.3
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 6.3e-16 87.8 121 39.7
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 8.2e-16 87.4 106 46.2
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 8.2e-16 87.4 106 45.3
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 1.4e-15 86.7 106 41.5
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 1.8e-15 86.3 105 41.0
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 2.4e-15 85.9 106 42.5
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 5.3e-15 84.7 119 40.3
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 5.3e-15 84.7 106 42.5
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 5.3e-15 84.7 106 45.3
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 9.1e-15 84.0 105 39.0
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 1.5e-14 83.2 111 39.6
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 2.6e-14 82.4 117 36.8
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 2.6e-14 82.4 105 40.0
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 2.6e-14 82.4 121 37.2
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 5.9e-14 81.3 106 43.4
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 5.9e-14 81.3 107 40.2
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 5.9e-14 81.3 120 36.7
Peaxi162Scf00363g00073 Petunia axillaris HOM05D005682 ORTHO05D007050 1.0e-13 80.5 70 54.3
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 1.0e-13 80.5 104 43.3
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 1.7e-13 79.7 106 37.7
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 2.2e-13 79.3 106 43.4
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 2.2e-13 79.3 115 38.3
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 2.2e-13 79.3 107 40.2
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 2.9e-13 79.0 103 40.8
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 5.0e-13 78.2 103 39.8
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 6.5e-13 77.8 115 37.4
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 1.1e-12 77.0 119 33.6
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 1.1e-12 77.0 106 39.6
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 1.4e-12 76.6 89 43.8
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 1.9e-12 76.3 115 36.5
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 2.5e-12 75.9 94 41.5
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 2.5e-12 75.9 103 40.8
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 3.2e-12 75.5 70 52.9
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 3.2e-12 75.5 71 56.3
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 3.2e-12 75.5 108 38.9
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 4.2e-12 75.1 89 42.7
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 5.5e-12 74.7 70 54.3
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 5.5e-12 74.7 92 41.3
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 9.4e-12 73.9 120 35.8
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 1.2e-11 73.6 106 39.6
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 1.6e-11 73.2 103 40.8
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 1.6e-11 73.2 91 38.5
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 1.6e-11 73.2 91 38.5
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 1.6e-11 73.2 91 38.5
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 2.1e-11 72.8 93 39.8
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 2.7e-11 72.4 120 35.8
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 2.7e-11 72.4 120 35.0
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 3.6e-11 72.0 108 38.0
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 6.1e-11 71.2 106 36.8
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 6.1e-11 71.2 108 38.0
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 7.9e-11 70.9 89 39.3
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 1.0e-10 70.5 106 32.1
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 1.8e-10 69.7 94 37.2
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 2.3e-10 69.3 103 36.9
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 2.3e-10 69.3 104 36.5
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 3.0e-10 68.9 89 40.4
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 3.9e-10 68.6 92 41.3
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 3.9e-10 68.6 105 36.2
CSS0026201 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 8.8e-10 67.4 106 39.6
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.5e-09 66.6 103 35.0
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 2.6e-09 65.9 106 34.0
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 2.6e-09 65.9 108 35.2
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 4.4e-09 65.1 102 33.3
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 7.4e-09 64.3 103 34.0
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 1.3e-08 63.5 89 38.2
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 1.7e-08 63.2 73 43.8
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 2.2e-08 62.8 73 43.8
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 4.8e-08 61.6 102 32.4
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 1.8e-07 59.7 121 28.9
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 1.5e-06 56.6 120 24.2
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 2.0e-06 56.2 108 26.9


User provided reference genes

Program Settings