Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.5e-134 483.0 274 100.0
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 8.3e-101 370.9 214 80.4
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.1e-100 370.5 217 80.2
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.4e-100 370.2 214 80.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 2.4e-100 369.4 217 78.8
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 2.4e-100 369.4 217 79.7
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 3.1e-100 369.0 217 80.2
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 4.1e-100 368.6 214 79.4
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.0e-100 367.9 217 79.7
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 7.0e-100 367.9 214 79.4
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 7.0e-100 367.9 214 79.4
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.1e-100 367.5 217 79.3
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.2e-99 367.1 219 79.5
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.7e-99 365.9 214 79.0
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.5e-99 365.5 218 79.4
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 3.5e-99 365.5 214 79.0
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 4.5e-99 365.2 217 77.9
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 7.7e-99 364.4 214 78.5
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.0e-98 364.0 217 80.2
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.0e-98 364.0 217 78.3
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.7e-98 363.2 217 77.9
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.7e-98 363.2 217 78.8
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 2.3e-98 362.8 222 76.6
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.3e-98 362.8 217 78.3
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 2.3e-98 362.8 214 79.4
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 3.8e-98 362.1 217 75.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 3.8e-98 362.1 214 78.5
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 5.0e-98 361.7 217 78.8
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 5.0e-98 361.7 217 76.5
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 6.5e-98 361.3 217 78.3
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 6.5e-98 361.3 214 79.4
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 6.5e-98 361.3 217 77.9
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 8.6e-98 360.9 217 77.0
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 8.6e-98 360.9 217 78.3
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.5e-97 360.1 217 75.1
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 1.5e-97 360.1 217 74.7
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.5e-97 360.1 217 77.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 1.5e-97 360.1 217 78.3
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.9e-97 359.8 217 77.4
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.5e-97 359.4 217 77.9
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 3.2e-97 359.0 215 78.6
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 4.2e-97 358.6 217 77.0
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 4.2e-97 358.6 214 78.5
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 5.5e-97 358.2 217 74.2
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 5.5e-97 358.2 222 75.7
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 7.2e-97 357.8 217 76.5
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 9.5e-97 357.5 217 74.7
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 9.5e-97 357.5 217 74.7
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 9.5e-97 357.5 217 74.7
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 9.5e-97 357.5 214 76.6
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 9.5e-97 357.5 216 75.0
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.2e-96 357.1 217 74.7
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 1.6e-96 356.7 217 74.2
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 4.7e-96 355.1 217 73.7
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 6.1e-96 354.8 217 74.7
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 6.1e-96 354.8 217 72.8
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 1.4e-95 353.6 217 76.5
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.4e-95 353.6 212 76.4
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.8e-95 353.2 217 73.3
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-95 353.2 217 73.3
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.8e-95 353.2 217 73.3
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 2.3e-95 352.8 215 77.7
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.3e-95 352.8 214 77.1
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 2.3e-95 352.8 195 83.1
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 2.3e-95 352.8 217 77.4
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 4.0e-95 352.1 215 76.3
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 5.2e-95 351.7 217 72.8
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 5.2e-95 351.7 217 72.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 5.2e-95 351.7 222 72.5
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 8.8e-95 350.9 217 76.0
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.2e-94 350.5 217 76.0
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.5e-94 350.1 217 72.8
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 2.0e-94 349.7 214 77.1
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.0e-94 349.7 217 74.2
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 9.8e-94 347.4 217 74.7
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.1e-92 344.0 217 73.3
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.8e-92 343.2 217 74.2
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 2.4e-92 342.8 217 73.3
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 4.1e-92 342.0 221 71.9
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 7.0e-92 341.3 214 73.8
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 9.2e-92 340.9 214 74.8
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 9.2e-92 340.9 207 76.3
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 2.0e-91 339.7 217 72.8
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.7e-91 339.3 217 73.3
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.0e-90 337.4 220 71.8
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.0e-90 337.4 217 73.3
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.3e-90 337.0 195 79.0
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.3e-90 336.3 217 73.3
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.5e-89 333.6 239 69.0
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.5e-89 332.8 217 70.5
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.3e-89 332.0 229 71.2
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 5.6e-89 331.6 217 71.9
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 2.3e-87 326.2 268 61.9
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 4.0e-87 325.5 214 70.6
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.5e-86 323.6 307 55.0
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 3.4e-86 322.4 214 71.5
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.6e-83 313.5 217 66.4
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 4.3e-81 305.4 202 70.3
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.2e-78 297.4 205 69.3
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.0e-78 296.6 165 82.4
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 4.9e-77 292.0 162 82.7
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 4.9e-77 292.0 167 80.2
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 6.2e-72 275.0 217 62.2
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.2e-71 271.9 213 62.0
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.1e-68 264.2 216 59.3
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.4e-62 242.3 217 53.5
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.1e-59 233.4 141 79.4
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 9.6e-49 198.0 163 60.1
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.1e-47 194.5 217 49.3
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 5.8e-46 188.7 101 83.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 7.9e-43 178.3 125 68.0
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.2e-38 164.5 210 43.8
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 1.9e-36 157.1 97 73.2
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.4e-36 156.8 217 42.4
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.8e-34 150.6 210 42.4
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.3e-32 144.4 86 76.7
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.6e-32 144.1 84 78.6
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 9.0e-31 138.3 81 76.5
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 9.0e-31 138.3 81 76.5
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 9.0e-31 138.3 98 66.3
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.3e-26 124.4 96 64.6
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.3e-26 123.6 79 73.4
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 3.7e-24 116.3 117 52.1
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 3.7e-24 116.3 117 52.1
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.6e-22 110.2 82 67.1
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.3e-21 107.8 66 75.8
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.8e-21 106.3 60 80.0
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 6.7e-18 95.5 190 35.8
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 8.2e-16 88.6 55 76.4
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.1e-15 88.2 171 33.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 2.0e-14 84.0 48 79.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.9e-12 77.4 194 29.9
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 4.4e-09 66.2 41 75.6


User provided reference genes

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