Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 2.3e-79 298.9 156 100.0
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 1.5e-46 189.9 131 79.4
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.5e-46 189.9 126 78.6
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 1.9e-46 189.5 157 70.1
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 5.6e-46 188.0 157 70.1
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 9.6e-46 187.2 131 75.6
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 2.1e-45 186.0 137 74.5
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 2.1e-45 186.0 157 68.8
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 6.2e-45 184.5 120 78.3
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 6.2e-45 184.5 143 71.3
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 8.2e-45 184.1 133 76.7
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.1e-44 183.7 126 77.8
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 1.1e-44 183.7 157 68.2
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.1e-44 183.7 132 75.0
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.4e-44 183.3 132 75.0
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 1.4e-44 183.3 158 69.0
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.8e-44 183.0 158 69.0
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.8e-44 183.0 124 77.4
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.4e-44 182.6 157 68.2
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 2.4e-44 182.6 137 73.0
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 3.1e-44 182.2 160 66.2
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 4.0e-44 181.8 133 75.9
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 5.3e-44 181.4 156 68.6
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 5.3e-44 181.4 126 75.4
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 6.9e-44 181.0 137 73.7
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 9.0e-44 180.6 156 65.4
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 9.0e-44 180.6 126 77.0
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 9.0e-44 180.6 156 64.7
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 9.0e-44 180.6 122 78.7
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 1.2e-43 180.3 155 67.1
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 3.4e-43 178.7 121 76.9
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 3.4e-43 178.7 126 74.6
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 4.5e-43 178.3 127 75.6
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 4.5e-43 178.3 126 74.6
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 4.5e-43 178.3 126 74.6
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 4.5e-43 178.3 130 73.8
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 7.6e-43 177.6 124 76.6
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.0e-42 177.2 126 76.2
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 1.3e-42 176.8 126 74.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 1.3e-42 176.8 148 69.6
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.3e-42 176.8 120 77.5
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 1.7e-42 176.4 152 66.4
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 1.7e-42 176.4 141 70.9
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 1.7e-42 176.4 153 63.4
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 2.2e-42 176.0 150 67.3
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.2e-42 176.0 148 68.2
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 2.9e-42 175.6 126 73.0
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 2.9e-42 175.6 153 66.7
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.8e-42 175.3 150 66.0
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 3.8e-42 175.3 147 66.7
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 4.9e-42 174.9 126 72.2
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 4.9e-42 174.9 165 64.8
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 4.9e-42 174.9 139 71.2
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 4.9e-42 174.9 156 64.1
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 4.9e-42 174.9 159 65.4
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 6.5e-42 174.5 121 77.7
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 6.5e-42 174.5 155 65.2
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 8.4e-42 174.1 127 72.4
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 8.4e-42 174.1 127 72.4
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.1e-41 173.7 147 66.0
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.4e-41 173.3 118 74.6
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.4e-41 173.3 151 64.2
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 2.5e-41 172.6 121 75.2
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 2.5e-41 172.6 158 65.8
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 3.2e-41 172.2 163 63.8
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 3.2e-41 172.2 131 71.8
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 3.2e-41 172.2 136 70.6
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 3.2e-41 172.2 148 63.5
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 3.2e-41 172.2 134 70.9
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 5.5e-41 171.4 152 65.8
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 9.3e-41 170.6 144 63.9
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 9.3e-41 170.6 158 63.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 9.3e-41 170.6 158 63.9
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 9.3e-41 170.6 145 64.1
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.2e-40 170.2 134 68.7
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.6e-40 169.9 121 75.2
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.1e-40 169.5 127 71.7
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 2.1e-40 169.5 156 63.5
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.7e-40 169.1 152 65.1
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 3.5e-40 168.7 121 75.2
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 3.5e-40 168.7 153 65.4
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 7.9e-40 167.5 120 75.8
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 7.9e-40 167.5 121 75.2
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.0e-39 167.2 129 69.8
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 1.0e-39 167.2 161 64.0
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 1.3e-39 166.8 123 75.6
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 2.3e-39 166.0 151 64.9
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 2.3e-39 166.0 154 64.3
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 3.0e-39 165.6 120 73.3
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 3.0e-39 165.6 114 74.6
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 3.9e-39 165.2 128 70.3
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.9e-39 165.2 158 64.6
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 3.9e-39 165.2 161 61.5
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 5.1e-39 164.9 120 75.0
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 5.1e-39 164.9 147 65.3
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 6.7e-39 164.5 157 61.8
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 8.7e-39 164.1 143 62.9
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 7.4e-38 161.0 158 62.7
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.3e-37 160.2 127 67.7
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.6e-37 159.8 135 68.9
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 2.2e-37 159.5 135 66.7
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 2.8e-37 159.1 176 55.1
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 6.3e-37 157.9 156 61.5
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 8.2e-37 157.5 158 61.4
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 5.3e-36 154.8 157 61.8
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 4.5e-35 151.8 122 66.4
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 5.9e-35 151.4 129 65.9
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.0e-34 150.6 134 61.9
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.7e-34 149.8 78 93.6
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 2.2e-34 149.4 141 58.9
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 2.5e-33 146.0 78 89.7
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 7.2e-33 144.4 156 54.5
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 1.6e-32 143.3 86 80.2
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.1e-30 137.1 95 75.8
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 2.5e-30 136.0 75 85.3
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 7.4e-30 134.4 79 83.5
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.6e-27 125.9 123 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 7.7e-27 124.4 130 55.4
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.9e-25 119.8 125 59.2
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.5e-25 119.4 131 55.0
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 1.8e-23 113.2 81 69.1
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 2.6e-22 109.4 75 68.0
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 4.4e-22 108.6 123 51.2
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 7.4e-22 107.8 83 66.3
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 5.5e-17 91.7 77 55.8
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 1.0e-15 87.4 139 41.0
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 2.1e-08 63.2 36 88.9
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 5.2e-07 58.5 73 42.5


User provided reference genes

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