Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 6.8e-128 460.7 234 100.0
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.1e-100 369.4 235 77.0
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.3e-94 350.1 232 74.1
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 2.2e-94 349.4 235 71.1
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 3.8e-94 348.6 238 73.9
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 6.4e-94 347.8 234 72.6
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.1e-93 345.1 232 72.4
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 4.1e-93 345.1 233 72.1
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 4.1e-93 345.1 235 72.8
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 7.1e-93 344.4 252 67.5
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.6e-92 343.2 235 71.5
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.6e-92 343.2 235 71.5
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 2.1e-92 342.8 234 71.4
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 2.7e-92 342.4 234 71.4
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 3.5e-92 342.0 232 71.6
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 4.6e-92 341.7 235 72.3
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 7.8e-92 340.9 234 70.9
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 5.1e-91 338.2 234 70.9
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 6.6e-91 337.8 234 70.9
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.1e-90 337.0 232 70.7
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 1.9e-90 336.3 225 71.6
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 1.9e-90 336.3 235 69.8
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 2.5e-90 335.9 236 67.4
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 7.3e-90 334.3 233 71.2
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 1.2e-89 333.6 233 70.8
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 2.1e-89 332.8 235 67.7
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 3.6e-89 332.0 233 67.8
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 8.1e-89 330.9 236 68.2
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.1e-88 330.5 236 68.2
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 2.4e-88 329.3 223 72.2
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 3.1e-88 328.9 237 65.8
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 3.1e-88 328.9 230 69.6
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.0e-88 328.6 236 67.8
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 4.0e-88 328.6 230 69.1
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 4.0e-88 328.6 233 68.7
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 5.2e-88 328.2 233 69.1
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 2.0e-87 326.2 237 67.9
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 4.4e-87 325.1 236 67.4
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.4e-87 325.1 236 67.4
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 7.6e-87 324.3 223 70.4
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 7.6e-87 324.3 233 66.1
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 1.7e-86 323.2 240 67.9
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.2e-86 322.8 237 67.5
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 3.8e-86 322.0 233 70.0
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 6.4e-86 321.2 234 67.9
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.4e-85 320.1 222 72.1
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 9.3e-85 317.4 229 69.4
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 9.3e-85 317.4 230 67.8
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.2e-84 317.0 223 66.4
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 1.2e-84 317.0 210 73.3
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.6e-84 316.6 219 69.9
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.6e-84 316.6 233 68.2
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 2.1e-84 316.2 236 66.9
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 2.7e-84 315.8 239 64.9
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 2.7e-84 315.8 239 64.9
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 2.7e-84 315.8 230 67.8
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 4.6e-84 315.1 233 65.2
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 7.8e-84 314.3 223 67.7
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 7.8e-84 314.3 234 66.7
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 1.0e-83 313.9 211 71.6
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 1.5e-82 310.1 234 64.5
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 2.1e-81 306.2 233 63.5
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 2.8e-81 305.8 236 65.3
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 2.8e-81 305.8 232 64.2
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 3.6e-81 305.4 236 65.3
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 4.8e-81 305.1 224 65.2
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 3.1e-80 302.4 236 64.8
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 4.0e-80 302.0 228 64.5
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 4.0e-80 302.0 237 64.6
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 4.0e-80 302.0 226 63.7
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 6.9e-80 301.2 236 64.0
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 9.0e-80 300.8 230 63.0
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 9.0e-80 300.8 236 63.6
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 1.5e-79 300.1 222 65.8
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 4.5e-79 298.5 239 61.1
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 9.9e-79 297.4 239 63.2
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.7e-78 296.6 238 63.0
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 1.7e-78 296.6 228 62.7
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.2e-78 296.2 236 63.6
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.2e-78 296.2 236 63.6
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 2.9e-78 295.8 236 62.3
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 4.9e-78 295.0 236 63.1
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 4.9e-78 295.0 223 64.6
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 5.4e-77 291.6 204 68.6
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 2.7e-76 289.3 218 64.2
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 7.9e-76 287.7 235 61.3
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 1.3e-75 287.0 228 63.6
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 1.8e-75 286.6 229 64.2
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 1.9e-74 283.1 234 60.7
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 3.6e-73 278.9 225 63.1
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 3.6e-73 278.9 212 63.2
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 1.3e-70 270.4 219 59.8
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 2.6e-63 246.1 254 50.0
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.3e-62 243.8 223 55.2
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.6e-60 236.9 225 56.0
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 5.1e-59 231.9 173 66.5
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 2.5e-58 229.6 151 73.5
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 8.5e-54 214.5 155 68.4
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 2.5e-45 186.4 217 46.1
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 2.7e-44 183.0 210 43.8
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.4e-43 180.6 156 57.1
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 1.1e-42 177.6 134 61.9
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.5e-42 177.2 237 43.9
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 2.2e-41 173.3 232 42.7
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 4.8e-41 172.2 148 54.7
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 2.1e-36 156.8 215 39.1
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 4.7e-36 155.6 215 38.1
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 3.9e-35 152.5 217 37.3
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.4e-32 143.3 99 69.7
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 7.7e-31 138.3 162 46.3
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 6.5e-30 135.2 117 54.7
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 5.5e-29 132.1 108 62.0
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.2e-22 110.2 72 69.4
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 2.7e-20 103.2 212 32.5
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 3.0e-11 73.2 87 49.4
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 3.0e-11 73.2 87 49.4
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 2.4e-08 63.5 43 62.8


User provided reference genes

Program Settings