Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 9.1e-159 563.5 286 100.0
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 7.3e-124 447.6 286 78.7
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 2.2e-120 436.0 287 76.3
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 2.4e-119 432.6 286 74.8
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 8.6e-117 424.1 286 74.5
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 1.9e-116 422.9 287 74.6
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 5.6e-116 421.4 288 73.3
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 3.6e-115 418.7 288 72.9
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 4.7e-115 418.3 288 72.9
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 4.7e-115 418.3 288 72.6
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 6.4e-112 407.9 287 72.5
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 8.3e-112 407.5 286 70.3
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 1.9e-111 406.4 287 72.5
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 5.4e-111 404.8 288 74.0
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.2e-110 403.7 286 69.2
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 1.2e-110 403.7 288 70.1
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 2.7e-110 402.5 288 71.5
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 6.0e-110 401.4 286 69.6
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 1.7e-109 399.8 286 70.6
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 6.6e-109 397.9 297 70.0
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 6.6e-109 397.9 286 69.6
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 6.6e-109 397.9 288 70.1
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 7.3e-108 394.4 288 70.1
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 7.3e-108 394.4 287 71.1
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 9.5e-108 394.0 287 70.4
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 4.0e-106 388.7 288 68.4
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 5.2e-106 388.3 289 69.6
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 5.2e-106 388.3 286 68.2
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 8.9e-106 387.5 286 67.1
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.0e-105 386.3 289 69.2
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 2.0e-105 386.3 298 68.1
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.7e-104 383.3 296 67.6
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 6.4e-104 381.3 256 75.0
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 1.1e-103 380.6 283 67.5
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 2.4e-103 379.4 287 66.2
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 5.4e-103 378.3 254 74.8
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 7.1e-103 377.9 288 66.3
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 1.2e-102 377.1 287 66.6
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 2.7e-102 375.9 289 67.1
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 3.5e-102 375.6 286 67.5
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.3e-101 373.6 287 65.5
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 3.0e-101 372.5 287 66.2
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 5.1e-101 371.7 287 66.6
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.1e-100 370.5 287 65.5
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 1.5e-100 370.2 296 64.5
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 5.6e-100 368.2 291 67.0
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 2.8e-99 365.9 256 69.9
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 4.7e-99 365.2 256 69.9
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 6.2e-99 364.8 265 67.9
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 1.4e-98 363.6 287 64.8
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 1.4e-98 363.6 286 62.9
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 5.8e-97 358.2 283 64.0
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.7e-96 356.7 287 62.7
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 2.2e-96 356.3 290 63.8
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 2.9e-96 355.9 240 71.2
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 2.9e-96 355.9 281 64.8
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 5.4e-95 351.7 255 69.8
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 1.2e-94 350.5 274 65.7
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 1.6e-94 350.1 287 62.0
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 1.6e-94 350.1 287 62.7
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 2.7e-94 349.4 241 69.7
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 4.6e-94 348.6 287 62.0
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.6e-94 348.6 286 61.9
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 6.0e-94 348.2 288 62.5
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 6.0e-94 348.2 288 63.2
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.0e-93 347.4 286 61.9
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 3.0e-93 345.9 240 69.6
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 3.9e-93 345.5 296 61.5
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 3.9e-93 345.5 296 60.8
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 6.6e-93 344.7 284 63.4
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 8.6e-93 344.4 287 62.4
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 8.6e-93 344.4 296 60.8
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 1.1e-92 344.0 243 70.8
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 1.1e-92 344.0 278 63.3
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.9e-92 343.2 288 61.5
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 5.6e-92 341.7 287 62.0
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 2.1e-91 339.7 289 61.2
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 2.1e-91 339.7 289 61.2
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 3.6e-91 339.0 270 63.7
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 4.7e-91 338.6 288 59.7
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.8e-90 336.7 221 73.3
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 1.2e-89 334.0 287 61.0
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 3.4e-89 332.4 289 59.9
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 9.9e-89 330.9 288 59.7
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.3e-88 330.5 268 64.6
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 2.9e-88 329.3 287 61.3
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 3.8e-88 328.9 256 64.5
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 8.4e-88 327.8 260 64.6
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 5.4e-87 325.1 266 60.9
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 9.3e-87 324.3 284 61.3
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.6e-86 323.6 266 61.3
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 2.3e-85 319.7 309 57.3
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 2.5e-84 316.2 262 58.8
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 3.3e-84 315.8 294 57.5
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 4.0e-82 308.9 267 58.4
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 5.8e-81 305.1 244 63.1
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 9.3e-79 297.7 248 60.9
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.1e-78 296.6 245 61.2
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 1.9e-76 290.0 243 63.8
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 9.6e-76 287.7 183 76.0
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.4e-74 283.9 224 58.9
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 1.2e-73 280.8 231 56.7
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 1.5e-68 263.8 285 51.6
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 2.5e-68 263.1 222 56.3
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 3.3e-68 262.7 261 52.1
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 7.4e-68 261.5 175 73.1
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.3e-67 260.8 173 71.7
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 1.1e-63 247.7 227 53.3
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 4.2e-63 245.7 291 47.8
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 1.1e-60 237.7 248 48.4
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 5.9e-57 225.3 186 56.5
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.4e-55 220.7 265 47.2
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.0e-53 214.5 247 44.9
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.3e-53 213.4 231 53.2
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 3.3e-52 209.5 167 63.5
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 9.7e-52 208.0 236 52.1
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 3.6e-46 189.5 112 82.1
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 2.8e-35 153.3 130 62.3
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 3.7e-35 152.9 223 38.6
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 3.8e-32 142.9 109 61.5
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 2.3e-29 133.7 74 82.4
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 2.6e-28 130.2 195 39.0
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 7.5e-28 128.6 142 48.6
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 1.6e-25 120.9 90 61.1
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 5.9e-25 119.0 81 65.4
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 5.0e-24 115.9 81 64.2
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 6.1e-22 109.0 82 62.2
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 1.3e-16 91.3 138 33.3
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 2.9e-16 90.1 80 60.0
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 2.5e-15 87.0 197 31.5
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 4.0e-13 79.7 52 71.2
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 6.8e-13 79.0 106 43.4
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 2.0e-12 77.4 68 55.9
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 4.4e-12 76.3 99 44.4
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 5.7e-12 75.9 54 68.5
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 5.7e-12 75.9 99 43.4
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 5.7e-12 75.9 99 43.4
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 9.8e-12 75.1 99 43.4
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.2e-11 73.9 99 42.4
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 3.7e-11 73.2 58 63.8
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.2e-09 68.2 130 36.9
Sed0028226 Sechium edule HOM05D004634 ORTHO05D005502 8.0e-06 55.5 249 26.1


User provided reference genes

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