Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 0.0e+00 1348.2 687 100.0
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 5.5e-101 372.9 294 65.6
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 1.8e-99 367.9 280 66.4
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 2.5e-98 364.0 300 63.7
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 4.8e-97 359.8 224 77.2
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 8.1e-97 359.0 214 78.5
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 9.0e-96 355.5 227 71.8
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 1.7e-94 351.3 223 74.9
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 4.9e-94 349.7 244 71.7
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 8.4e-94 349.0 209 78.0
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 8.4e-94 349.0 255 66.7
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 1.1e-93 348.6 218 76.1
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 1.9e-93 347.8 211 77.3
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 2.5e-93 347.4 296 61.8
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 3.2e-93 347.1 277 63.9
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 4.2e-93 346.7 225 72.9
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 9.3e-93 345.5 269 66.2
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 9.3e-93 345.5 251 67.7
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 1.2e-92 345.1 288 63.2
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 1.2e-92 345.1 250 67.2
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 2.1e-92 344.4 292 62.3
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 2.1e-92 344.4 292 62.3
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 4.6e-92 343.2 225 71.6
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 6.0e-92 342.8 255 67.1
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 7.9e-92 342.4 213 74.6
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.0e-91 342.0 225 71.1
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 1.3e-91 341.7 232 71.1
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 1.8e-91 341.3 265 65.3
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 3.0e-91 340.5 228 71.5
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 8.7e-91 339.0 242 69.0
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 8.7e-91 339.0 216 73.1
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 1.1e-90 338.6 303 57.8
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.5e-90 338.2 222 72.1
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 1.9e-90 337.8 291 60.8
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 1.9e-90 337.8 249 66.3
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 1.9e-90 337.8 220 73.6
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 2.5e-90 337.4 228 70.6
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 3.3e-90 337.0 316 57.3
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 4.3e-90 336.7 221 71.9
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 5.7e-90 336.3 241 69.7
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 9.6e-90 335.5 222 71.6
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 2.1e-89 334.3 221 70.6
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 2.8e-89 334.0 264 65.2
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 1.1e-88 332.0 224 71.9
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.4e-88 331.6 258 65.1
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 1.4e-88 331.6 217 72.8
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 1.4e-88 331.6 209 75.1
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 2.4e-88 330.9 313 55.9
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 2.4e-88 330.9 223 70.0
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 2.4e-88 330.9 235 69.4
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.1e-88 330.5 281 61.2
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 3.1e-88 330.5 222 68.9
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 6.9e-88 329.3 220 71.4
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 6.9e-88 329.3 224 71.4
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 6.9e-88 329.3 234 70.1
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 9.0e-88 328.9 210 73.3
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 1.2e-87 328.6 221 68.3
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 1.2e-87 328.6 222 69.8
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 2.0e-87 327.8 292 59.2
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 2.6e-87 327.4 251 64.1
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 3.4e-87 327.0 305 58.0
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 4.5e-87 326.6 209 72.7
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 5.9e-87 326.2 222 70.3
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 7.6e-87 325.9 257 63.4
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 7.6e-87 325.9 261 63.6
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 1.0e-86 325.5 268 60.4
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.0e-86 325.5 214 68.7
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 1.3e-86 325.1 305 56.7
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 2.2e-86 324.3 246 64.6
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 2.2e-86 324.3 198 76.3
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 2.9e-86 323.9 278 60.8
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 5.0e-86 323.2 319 55.8
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 6.5e-86 322.8 268 61.9
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 6.5e-86 322.8 303 57.4
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 6.5e-86 322.8 289 57.8
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 8.4e-86 322.4 285 57.9
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 1.9e-85 321.2 217 70.5
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 1.9e-85 321.2 275 59.6
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.5e-85 320.9 278 60.4
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 2.5e-85 320.9 265 62.3
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 3.2e-85 320.5 227 67.8
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 3.2e-85 320.5 192 75.5
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 4.2e-85 320.1 217 70.0
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 4.2e-85 320.1 217 70.0
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 5.5e-85 319.7 235 67.7
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 5.5e-85 319.7 224 70.5
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 9.3e-85 318.9 278 60.1
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 1.6e-84 318.2 288 57.3
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 1.6e-84 318.2 252 64.7
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 2.1e-84 317.8 208 72.6
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 3.6e-84 317.0 296 55.1
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 6.1e-84 316.2 296 55.1
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 6.1e-84 316.2 239 64.9
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 6.1e-84 316.2 232 65.5
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 1.8e-83 314.7 272 57.7
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 3.9e-83 313.5 272 58.5
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 3.9e-83 313.5 294 55.4
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 1.9e-82 311.2 325 53.5
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.5e-82 310.8 277 59.2
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 1.3e-81 308.5 318 55.0
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 1.3e-81 308.5 299 54.8
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 1.6e-81 308.1 292 55.8
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 2.2e-81 307.8 281 57.7
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.2e-79 302.0 233 64.8
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 2.6e-79 300.8 313 51.1
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.8e-78 297.0 287 55.1
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.2e-76 292.0 370 46.2
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.1e-72 278.9 209 67.0
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.4e-72 278.5 272 57.7
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.4e-72 278.5 397 42.8
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.5e-71 275.0 191 72.3
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.2e-68 265.4 312 47.4
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 2.1e-68 264.6 245 52.2
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 3.3e-66 257.3 273 51.3
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.3e-66 257.3 188 67.0
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 7.0e-64 249.6 209 61.7
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 6.5e-62 243.0 316 46.5
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 1.8e-59 235.0 309 47.6
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.3e-59 234.6 225 54.7
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 6.3e-57 226.5 166 62.7
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.2e-57 226.1 166 62.0
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 1.8e-56 224.9 129 76.0
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 3.5e-55 220.7 235 51.9
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 5.9e-55 219.9 119 79.8
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 8.5e-54 216.1 263 47.5
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.9e-53 214.9 126 78.6
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 5.5e-53 213.4 165 62.4
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 2.1e-52 211.5 194 61.3
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.0e-51 209.1 130 73.1
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 6.1e-44 183.3 152 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 2.3e-43 181.4 124 62.9
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 3.5e-39 167.5 216 45.8
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 6.8e-35 153.3 178 41.6
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 5.7e-34 150.2 99 71.7
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 2.5e-29 134.8 91 70.3
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.2e-27 127.1 125 52.8
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 1.6e-07 62.4 177 33.3
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.6e-07 62.4 32 78.1
FAN14G5434 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.7e-06 58.9 121 38.8


User provided reference genes

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