Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03426 Aquilegia oxysepala HOM05D008542 ORTHO05D009486 5.0e-38 160.6 80 100.0
Potri.002G050150 Populus trichocarpa HOM05D008542 ORTHO05D009486 1.6e-12 75.9 66 54.5
Actinidia24911 Actinidia chinensis HOM05D008542 ORTHO05D009486 6.1e-12 73.9 69 55.1
Actinidia21129 Actinidia chinensis HOM05D008542 ORTHO05D009486 3.0e-11 71.6 71 50.7
Dinv32906 Davidia involucrata HOM05D008542 ORTHO05D009486 5.2e-11 70.9 67 50.7
Peaxi162Scf00783g00135 Petunia axillaris HOM05D008542 ORTHO05D009486 1.1e-10 69.7 70 48.6
Actinidia09119 Actinidia chinensis HOM05D008542 ORTHO05D009486 2.0e-10 68.9 68 55.9
TAR260G0004 Trochodendron aralioides HOM05D008542 ORTHO05D009486 3.3e-10 68.2 64 48.4
Eucgr.H01456 Eucalyptus grandis HOM05D008542 ORTHO05D009486 4.4e-10 67.8 66 48.5
Hma1.2p1_0667F.1_g199740 Hydrangea macrophylla HOM05D008542 ORTHO05D009486 4.4e-10 67.8 72 50.0
Actinidia00784 Actinidia chinensis HOM05D008542 ORTHO05D009486 5.7e-10 67.4 67 52.2
CAN.G1549.25 Capsicum annuum HOM05D008542 ORTHO05D009486 5.7e-10 67.4 65 49.2
Eucgr.K03345 Eucalyptus grandis HOM05D008542 ORTHO05D009486 9.7e-10 66.6 70 48.6
Nitab4.5_0008064g0010 Nicotiana tabacum HOM05D008542 ORTHO05D009486 9.7e-10 66.6 76 43.4
PGR044G1462 Punica granatum HOM05D008542 ORTHO05D009486 1.3e-09 66.2 66 45.5
Oeu029462.1 Olea europaea HOM05D008542 ORTHO05D009486 1.7e-09 65.9 66 50.0
TWI75G0224 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 1.7e-09 65.9 68 52.9
Sabra08G0118400 Salix brachista HOM05D008542 ORTHO05D009486 2.2e-09 65.5 69 43.5
Potri.010G084700 Populus trichocarpa HOM05D008542 ORTHO05D009486 2.8e-09 65.1 69 43.5
QL12p020979 Quercus lobata HOM05D008542 ORTHO05D009486 2.8e-09 65.1 65 46.2
Solyc06g008650.4 Solanum lycopersicum HOM05D011159 ORTHO05D009486 2.8e-09 65.1 72 44.4
CiPaw.08G107700 Carya illinoinensis HOM05D008542 ORTHO05D009486 3.7e-09 64.7 66 50.0
Nitab4.5_0001729g0040 Nicotiana tabacum HOM05D008542 ORTHO05D009486 3.7e-09 64.7 67 47.8
TWI18G0041 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 3.7e-09 64.7 65 47.7
Rhsim13G0027000 Rhododendron simsii HOM05D008542 ORTHO05D009486 4.8e-09 64.3 67 46.3
Sabra05G0162200 Salix brachista HOM05D008542 ORTHO05D009486 4.8e-09 64.3 64 46.9
Cpa.g.sc52.57 Carica papaya HOM05D008542 ORTHO05D009486 6.3e-09 63.9 69 43.5
MELO3C022293.2 Cucumis melo HOM05D011255 ORTHO05D009486 8.2e-09 63.5 71 42.3
Potri.008G155600 Populus trichocarpa HOM05D008542 ORTHO05D009486 8.2e-09 63.5 69 43.5
Solyc06g084180.3 Solanum lycopersicum HOM05D008542 ORTHO05D009486 8.2e-09 63.5 75 46.7
Sopen06g035560 Solanum pennellii HOM05D008542 ORTHO05D009486 8.2e-09 63.5 75 46.7
Nitab4.5_0000252g0080 Nicotiana tabacum HOM05D008542 ORTHO05D009486 1.1e-08 63.2 67 46.3
Peaxi162Scf00572g00215 Petunia axillaris HOM05D011159 ORTHO05D009486 1.8e-08 62.4 66 47.0
CsaV3_6G008480 Cucumis sativus L. HOM05D011255 ORTHO05D009486 2.4e-08 62.0 71 42.3
Sabra10G0058600 Salix brachista HOM05D008542 ORTHO05D009486 2.4e-08 62.0 65 43.1
SHI00480 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-08 61.6 65 44.6
Sopen12g007460 Solanum pennellii HOM05D011159 ORTHO05D009486 4.1e-08 61.2 76 42.1
vmacro02595 Vaccinium macrocarpon HOM05D008542 ORTHO05D009486 4.1e-08 61.2 64 45.3
Solyc12g014580.2 Solanum lycopersicum HOM05D011159 ORTHO05D009486 5.3e-08 60.8 76 40.8
Lj2A1168T24 Lonicera japonica HOM05D008542 ORTHO05D009486 9.1e-08 60.1 70 42.9
PGSC0003DMG400012845 Solanum tuberosum HOM05D011159 ORTHO05D009486 1.2e-07 59.7 76 39.5
PGSC0003DMG400020057 Solanum tuberosum HOM05D008542 ORTHO05D009486 1.6e-07 59.3 67 47.8
Sopen06g003410 Solanum pennellii HOM05D011159 ORTHO05D009486 2.0e-07 58.9 72 40.3
Atru.chr4.2427 Acer truncatum HOM05D008542 ORTHO05D009486 7.7e-07 57.0 68 45.6
CAN.G1492.13 Capsicum annuum HOM05D011159 ORTHO05D009486 1.0e-06 56.6 76 39.5
PGSC0003DMG400005340 Solanum tuberosum HOM05D011159 ORTHO05D009486 1.3e-06 56.2 76 39.5
Peaxi162Scf00230g00137 Petunia axillaris HOM05D008542 ORTHO05D009486 1.7e-06 55.8 67 41.8
Nitab4.5_0002636g0060 Nicotiana tabacum HOM05D011159 ORTHO05D009486 5.0e-06 54.3 78 39.7
MELO3C035236.2 Cucumis melo HOM05D011255 ORTHO05D009486 6.5e-06 53.9 72 36.1
PGR004G2295 Punica granatum HOM05D008542 ORTHO05D009486 8.5e-06 53.5 69 37.7


User provided reference genes

Program Settings