Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 8.7e-199 696.8 361 100.0
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 5.2e-103 378.6 359 54.6
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 6.0e-99 365.2 341 59.2
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 7.1e-92 341.7 355 51.3
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 1.6e-91 340.5 347 50.1
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 1.0e-90 337.8 338 50.3
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 3.9e-90 335.9 353 50.4
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 8.6e-90 334.7 351 49.9
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 7.3e-89 331.6 351 50.4
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.6e-88 330.5 329 52.3
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 2.1e-88 330.1 367 49.0
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 3.1e-87 326.2 351 48.1
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 6.9e-87 325.1 345 50.7
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.5e-86 323.9 352 46.6
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 4.4e-86 322.4 346 48.6
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 1.3e-85 320.9 343 53.9
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 2.2e-85 320.1 341 49.6
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 2.9e-85 319.7 346 48.3
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 2.9e-85 319.7 336 49.4
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 9.3e-84 314.7 348 51.4
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 1.7e-82 310.5 334 48.8
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 2.3e-82 310.1 348 51.4
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 3.9e-82 309.3 337 49.6
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 5.1e-82 308.9 351 48.1
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 6.6e-82 308.5 359 48.2
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 1.1e-81 307.8 336 49.1
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 1.5e-81 307.4 330 48.5
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 1.5e-81 307.4 344 47.7
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 2.5e-81 306.6 354 48.9
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 2.5e-81 306.6 342 48.2
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 3.3e-81 306.2 341 44.6
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 3.3e-81 306.2 362 47.2
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 1.6e-80 303.9 332 47.3
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 2.1e-80 303.5 343 47.5
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 3.6e-80 302.8 350 47.7
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.8e-79 300.4 362 47.5
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 3.1e-79 299.7 367 44.7
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 3.1e-79 299.7 370 47.6
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.2e-78 297.7 357 46.2
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.2e-78 297.7 357 46.2
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.2e-78 297.7 357 46.2
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 2.0e-78 297.0 373 46.9
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 2.0e-78 297.0 349 47.3
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 3.4e-78 296.2 347 47.0
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 4.5e-78 295.8 368 48.1
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 4.5e-78 295.8 340 47.9
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 9.9e-78 294.7 334 47.0
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 9.9e-78 294.7 353 45.6
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 1.7e-77 293.9 372 44.1
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 1.7e-77 293.9 355 45.4
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 2.9e-77 293.1 345 48.4
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 3.2e-76 289.7 372 44.9
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 4.2e-76 289.3 369 46.3
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 7.1e-76 288.5 350 46.6
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 7.1e-76 288.5 336 46.7
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 9.3e-76 288.1 370 45.4
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 1.2e-75 287.7 352 49.7
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 2.1e-75 287.0 344 45.6
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 2.7e-75 286.6 348 48.3
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 2.7e-75 286.6 326 46.3
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 7.9e-75 285.0 328 47.3
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 5.1e-74 282.3 333 45.6
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 8.7e-74 281.6 360 43.3
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 6.2e-72 275.4 355 44.5
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 6.2e-72 275.4 343 44.6
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 1.8e-71 273.9 342 41.2
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 4.0e-71 272.7 337 45.4
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 9.0e-71 271.6 354 42.9
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 2.2e-69 266.9 338 44.1
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 8.4e-69 265.0 314 45.2
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 1.9e-68 263.8 360 43.3
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 1.6e-67 260.8 344 41.6
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 3.5e-67 259.6 352 41.5
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 1.0e-66 258.1 349 39.8
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 8.7e-66 255.0 348 40.8
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 4.3e-65 252.7 308 47.1
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 1.3e-64 251.1 306 47.1
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 2.8e-64 250.0 308 43.2
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 2.8e-64 250.0 308 43.2
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 2.8e-64 250.0 308 43.2
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 2.8e-64 250.0 354 38.7
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.2e-62 244.6 261 49.0
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 1.7e-61 240.7 310 40.6
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 2.2e-61 240.4 352 40.3
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 3.8e-61 239.6 309 41.7
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 3.2e-60 236.5 319 40.1
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 3.2e-60 236.5 337 41.2
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 7.1e-60 235.3 325 39.7
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 7.9e-59 231.9 264 48.9
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 6.7e-58 228.8 350 41.4
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 9.6e-57 224.9 317 42.6
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 9.6e-57 224.9 320 41.2
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 1.3e-56 224.6 316 41.8
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 6.9e-55 218.8 303 39.6
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.5e-54 217.6 322 39.8
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 1.3e-53 214.5 334 39.5
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 2.1e-51 207.2 371 36.1
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 2.5e-49 200.3 345 37.7
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 3.4e-46 189.9 206 43.2
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 1.3e-45 188.0 332 34.9
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 1.6e-43 181.0 279 38.0
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 2.7e-43 180.3 330 37.0
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.8e-42 177.6 266 43.6
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 1.8e-42 177.6 369 33.6
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 7.4e-41 172.2 338 34.0
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 1.8e-39 167.5 331 33.8
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 2.6e-38 163.7 318 38.4
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 6.3e-32 142.5 114 58.8
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 7.0e-31 139.0 118 52.5
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.5e-28 131.3 211 36.5
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 1.5e-28 131.3 326 27.6
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 5.5e-28 129.4 276 31.2
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 4.4e-25 119.8 197 35.5
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 5.7e-25 119.4 202 34.7
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 1.2e-22 111.7 151 37.1
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 8.0e-19 99.0 99 44.4
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 6.3e-16 89.4 156 35.3
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 8.3e-16 89.0 83 45.8
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 1.1e-15 88.6 118 39.0
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 1.2e-14 85.1 118 37.3
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 1.2e-14 85.1 118 37.3
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 3.5e-14 83.6 118 37.3
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 5.9e-14 82.8 118 36.4
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 5.9e-14 82.8 118 36.4
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 5.9e-14 82.8 118 38.1
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 1.5e-12 78.2 85 41.2
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 1.5e-12 78.2 85 41.2
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 4.2e-12 76.6 68 50.0
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 2.1e-11 74.3 157 31.8
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 1.0e-10 72.0 101 36.6
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 3.0e-10 70.5 72 44.4
Haze_20405 Corylus avellana HOM05D005574 ORTHO05D007102 1.8e-07 61.2 64 45.3
SEGI_33465 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 3.1e-07 60.5 60 53.3
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 2.7e-06 57.4 155 25.8
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 5.9e-06 56.2 98 36.7


User provided reference genes

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