Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 7.8e-124 447.2 237 100.0
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 3.3e-53 212.6 211 50.2
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 9.5e-53 211.1 211 49.3
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 2.2e-49 199.9 237 44.7
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 4.9e-49 198.7 224 45.1
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 4.9e-49 198.7 211 46.0
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.1e-48 197.6 251 43.4
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 2.4e-48 196.4 211 46.9
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 9.2e-48 194.5 249 42.2
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 4.5e-47 192.2 195 46.7
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 5.9e-47 191.8 251 42.6
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 5.9e-47 191.8 251 42.6
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 1.3e-46 190.7 217 46.1
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.7e-46 190.3 251 42.2
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 5.0e-46 188.7 244 41.8
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 5.0e-46 188.7 221 43.9
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 1.5e-45 187.2 227 43.6
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 3.3e-45 186.0 226 43.8
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 3.3e-45 186.0 238 42.4
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 4.3e-45 185.7 217 45.6
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 8.0e-44 181.4 242 41.7
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 8.0e-44 181.4 272 40.8
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 1.8e-43 180.3 255 39.6
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 4.0e-43 179.1 238 42.4
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 6.8e-43 178.3 235 42.1
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 8.9e-43 177.9 242 40.1
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 1.2e-42 177.6 236 42.8
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 2.6e-42 176.4 232 40.1
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 9.8e-42 174.5 242 42.1
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 1.3e-41 174.1 225 42.2
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 3.7e-41 172.6 161 52.2
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 4.9e-41 172.2 220 43.6
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 1.4e-40 170.6 248 39.1
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 1.9e-40 170.2 237 42.2
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 1.9e-40 170.2 240 38.8
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 3.2e-40 169.5 225 40.4
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 5.4e-40 168.7 260 39.2
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 5.4e-40 168.7 220 39.1
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 7.0e-40 168.3 231 42.4
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 7.0e-40 168.3 235 39.1
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 4.6e-39 165.6 221 39.8
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 3.9e-38 162.5 232 39.7
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 9.5e-37 157.9 235 38.7
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 2.8e-36 156.4 244 38.9
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 8.0e-36 154.8 214 41.6
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 1.4e-35 154.1 223 39.9
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 4.0e-35 152.5 155 47.1
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.2e-34 151.0 234 38.9
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 2.0e-34 150.2 224 37.9
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 2.6e-34 149.8 166 46.4
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 3.4e-34 149.4 246 35.0
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 5.8e-34 148.7 224 37.9
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 5.8e-34 148.7 240 37.1
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 9.8e-34 147.9 233 36.1
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 1.7e-33 147.1 228 36.8
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.7e-33 147.1 216 39.8
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 2.9e-33 146.4 231 37.7
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 2.9e-33 146.4 231 37.7
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.1e-32 144.4 231 37.7
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 4.1e-32 142.5 258 38.8
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 7.1e-32 141.7 150 47.3
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 7.1e-32 141.7 218 40.4
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 1.2e-31 141.0 214 36.9
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 3.5e-31 139.4 214 35.5
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.9e-29 133.7 220 34.5
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 4.3e-29 132.5 185 40.5
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 5.6e-29 132.1 235 38.7
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 7.3e-29 131.7 228 35.5
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 8.1e-28 128.3 159 42.8
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 6.8e-27 125.2 212 34.9
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 1.2e-26 124.4 203 35.0
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 1.5e-26 124.0 236 31.4
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 2.2e-25 120.2 221 33.5
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 6.4e-25 118.6 245 33.5
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.9e-24 117.1 159 41.5
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.4e-24 116.7 189 38.1
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 1.6e-23 114.0 229 32.8
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.6e-23 114.0 166 40.4
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 1.6e-23 114.0 261 34.1
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 2.7e-23 113.2 221 34.4
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 3.3e-21 106.3 159 38.4
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 2.8e-20 103.2 158 36.7
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 3.6e-20 102.8 159 36.5
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 3.1e-19 99.8 140 36.4
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 5.8e-18 95.5 181 34.3
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 2.4e-16 90.1 137 40.9
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 3.2e-16 89.7 220 27.7
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 2.5e-13 80.1 163 31.3
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 2.5e-13 80.1 163 31.3
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 2.8e-12 76.6 147 33.3
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 2.8e-12 76.6 232 27.2
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 6.2e-12 75.5 211 24.6
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 1.8e-11 73.9 237 29.5
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 1.8e-11 73.9 150 32.0
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 1.8e-11 73.9 150 32.0
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 1.8e-11 73.9 226 27.4
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 4.0e-11 72.8 229 26.2
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 4.0e-11 72.8 103 41.7
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 6.9e-11 72.0 210 27.1
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 9.0e-11 71.6 154 32.5
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 9.0e-11 71.6 246 28.0
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 1.2e-10 71.2 161 29.8
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 2.6e-10 70.1 230 27.8
BcaC05g24389 Brassica carinata HOM05D012198 ORTHO05D008817 1.7e-09 67.4 137 32.1
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 8.4e-09 65.1 138 33.3
Zm00001eb222870 Zea mays HOM05D026697 ORTHO05D008817 8.4e-09 65.1 152 27.0
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 2.4e-08 63.5 207 26.6
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 5.4e-08 62.4 86 37.2
Os10g0430600 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 4.6e-07 59.3 224 26.8
MD13G1194800 Malus domestica HOM05D007633 ORTHO05D008817 1.0e-06 58.2 53 58.5


User provided reference genes

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