Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 1.1e-216 756.9 553 100.0
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 6.8e-86 322.4 585 54.7
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 3.7e-84 316.6 577 59.1
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 5.4e-83 312.8 445 62.9
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 2.0e-82 310.8 501 58.3
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 2.7e-82 310.5 568 57.6
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 3.0e-81 307.0 530 57.5
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 1.5e-80 304.7 548 60.6
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 1.5e-80 304.7 531 59.1
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 1.9e-80 304.3 535 56.4
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 3.3e-80 303.5 567 56.4
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 1.2e-79 301.6 527 57.7
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 2.1e-79 300.8 528 60.2
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 2.8e-79 300.4 527 61.9
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 4.7e-79 299.7 539 61.4
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 6.2e-79 299.3 534 59.0
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 1.1e-78 298.5 528 58.9
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 3.1e-78 297.0 525 56.4
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 4.0e-78 296.6 599 56.4
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 1.5e-77 294.7 445 66.5
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 3.4e-77 293.5 540 56.7
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 5.8e-77 292.7 567 57.1
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 9.8e-77 292.0 544 57.9
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 9.8e-77 292.0 536 59.7
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 2.9e-76 290.4 525 56.4
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 2.9e-76 290.4 531 60.8
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 1.9e-75 287.7 539 62.0
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 4.1e-75 286.6 564 56.4
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 7.1e-75 285.8 522 54.2
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 9.2e-75 285.4 531 58.4
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 1.2e-74 285.0 561 44.4
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 1.2e-74 285.0 455 56.9
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 2.1e-74 284.3 555 58.6
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 2.1e-74 284.3 525 51.2
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 6.0e-74 282.7 556 54.7
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 7.8e-74 282.3 546 61.5
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 7.8e-74 282.3 560 54.5
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 7.8e-74 282.3 450 63.8
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 1.0e-73 282.0 175 80.0
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 1.3e-73 281.6 545 54.5
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 1.7e-73 281.2 532 57.9
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 3.9e-73 280.0 554 55.6
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 5.1e-73 279.6 525 57.9
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 5.1e-73 279.6 539 57.3
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 6.6e-73 279.3 549 55.2
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 1.1e-72 278.5 546 57.1
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 1.1e-72 278.5 515 59.2
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 4.3e-72 276.6 550 58.0
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 4.3e-72 276.6 560 57.5
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 4.3e-72 276.6 191 77.0
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 7.3e-72 275.8 443 66.1
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 7.3e-72 275.8 550 52.4
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 7.3e-72 275.8 554 57.8
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 9.5e-72 275.4 548 55.7
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 1.6e-71 274.6 596 54.9
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 2.8e-71 273.9 596 54.5
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 3.6e-71 273.5 179 78.2
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 3.6e-71 273.5 572 56.5
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 6.2e-71 272.7 580 53.1
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 1.8e-70 271.2 564 58.3
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 2.3e-70 270.8 557 55.5
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 3.1e-70 270.4 161 84.5
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 8.9e-70 268.9 534 60.5
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 1.5e-69 268.1 450 64.0
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 1.5e-69 268.1 513 51.1
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 1.5e-69 268.1 541 59.3
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 2.6e-69 267.3 575 56.3
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 3.4e-69 266.9 535 48.4
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 4.4e-69 266.5 176 79.0
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 5.8e-69 266.2 458 55.9
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 5.8e-69 266.2 559 56.0
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 1.7e-68 264.6 539 56.4
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 2.2e-68 264.2 525 61.5
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 3.7e-68 263.5 550 52.0
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 6.4e-68 262.7 544 56.8
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 8.4e-68 262.3 165 80.6
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 8.4e-68 262.3 497 59.6
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 8.4e-68 262.3 196 71.4
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 3.2e-67 260.4 512 56.8
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 3.2e-67 260.4 592 52.0
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 4.1e-67 260.0 540 55.9
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 4.1e-67 260.0 166 80.1
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 4.1e-67 260.0 451 63.9
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 5.4e-67 259.6 550 55.1
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 1.6e-66 258.1 538 60.2
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 2.1e-66 257.7 546 56.6
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 4.6e-66 256.5 185 73.0
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 4.6e-66 256.5 194 70.1
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 1.3e-65 255.0 174 75.3
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 1.3e-65 255.0 554 59.2
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 1.7e-65 254.6 454 63.0
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.7e-65 254.6 540 54.3
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 2.3e-65 254.2 455 60.7
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 3.0e-65 253.8 462 60.0
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 8.6e-65 252.3 447 59.3
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 1.1e-64 251.9 175 74.9
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 1.1e-64 251.9 609 49.6
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 1.9e-64 251.1 160 81.2
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 1.9e-64 251.1 160 81.2
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 2.5e-64 250.8 456 60.1
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 2.5e-64 250.8 451 53.9
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 9.6e-64 248.8 152 82.9
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 1.6e-63 248.1 170 75.9
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 2.1e-63 247.7 160 80.0
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 2.8e-63 247.3 554 42.1
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 4.7e-63 246.5 167 77.2
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 8.1e-63 245.7 185 70.8
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 8.1e-63 245.7 522 54.4
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 1.4e-62 245.0 153 81.7
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 5.2e-62 243.0 135 88.9
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 5.2e-62 243.0 452 59.3
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 6.8e-62 242.7 452 60.6
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 1.5e-61 241.5 448 55.1
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 2.0e-61 241.1 598 50.7
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 4.4e-61 240.0 171 73.1
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 2.9e-60 237.3 133 88.0
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 2.9e-60 237.3 532 48.5
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 6.4e-60 236.1 133 88.0
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 1.4e-59 235.0 132 87.9
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 2.4e-59 234.2 130 88.5
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 3.2e-59 233.8 159 76.1
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 4.2e-59 233.4 132 87.9
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 5.4e-59 233.0 469 53.1
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 9.3e-59 232.3 184 70.7
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 2.7e-58 230.7 133 85.7
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 3.5e-58 230.3 129 88.4
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 6.0e-58 229.6 170 71.8
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 1.7e-57 228.0 449 50.3
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 2.3e-57 227.6 129 87.6
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 2.3e-57 227.6 185 69.7
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 3.9e-57 226.9 531 56.1
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 3.9e-57 226.9 183 71.6
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 3.9e-57 226.9 178 73.0
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 3.9e-57 226.9 178 73.0
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 8.7e-57 225.7 132 84.8
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 1.1e-56 225.3 469 52.2
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 4.3e-56 223.4 130 85.4
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 4.3e-56 223.4 449 48.6
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 1.2e-53 215.3 133 82.7
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 1.6e-50 204.9 402 47.8
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 8.7e-49 199.1 534 41.9
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 5.6e-48 196.4 178 60.7
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 7.4e-48 196.1 180 58.9
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 8.1e-47 192.6 135 74.1
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 4.9e-44 183.3 412 56.6
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 8.4e-44 182.6 158 62.0
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 1.1e-43 182.2 126 76.2
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 7.9e-42 176.0 100 86.0
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 2.3e-41 174.5 132 71.2
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 1.5e-40 171.8 106 82.1
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 7.4e-40 169.5 103 81.6
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 3.1e-38 164.1 137 67.2
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 5.8e-37 159.8 93 83.9
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 1.4e-35 155.2 105 72.4
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 1.9e-32 144.8 116 62.1
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 5.7e-32 143.3 84 84.5
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 1.1e-30 139.0 84 82.1
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 2.6e-29 134.4 70 94.3
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 1.1e-27 129.0 103 56.3
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 1.4e-27 128.6 85 75.3
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 3.2e-27 127.5 161 49.1
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 4.2e-27 127.1 85 74.1
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.6e-23 115.2 472 47.7
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 8.2e-23 112.8 65 84.6
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 9.0e-22 109.4 68 79.4
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 3.4e-21 107.5 67 79.1
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 1.2e-18 99.0 68 75.0
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 1.6e-18 98.6 56 87.5
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 1.1e-16 92.4 54 87.0
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 9.7e-16 89.4 55 81.8
FAN22G0082 Fragaria x ananassa HOM05D003848 ORTHO05D035678 9.1e-14 82.8 206 38.8
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 5.0e-12 77.0 535 35.1
Lj1A173G45 Lonicera japonica HOM05D003848 ORTHO05D004616 1.4e-09 68.9 170 42.4
BraA09t40883Z Brassica rapa HOM05D003848 ORTHO05D004616 5.7e-08 63.5 98 50.0
BcaC01g01557 Brassica carinata HOM05D003848 ORTHO05D004616 1.3e-07 62.4 103 43.7
BolC3t21614H Brassica oleracea HOM05D003848 ORTHO05D004616 3.7e-07 60.8 45 66.7
C03p93060 Brassica napus HOM05D003848 ORTHO05D004616 3.1e-06 57.8 105 43.8
FvH4_2g11951 Fragaria vesca HOM05D003848 ORTHO05D035678 4.1e-06 57.4 57 54.4


User provided reference genes

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