Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 2.0e-43 178.7 91 100.0
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 1.4e-28 129.4 96 68.8
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 2.4e-28 128.6 90 73.3
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 9.0e-28 126.7 91 70.3
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 1.2e-27 126.3 93 67.7
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 1.2e-27 126.3 103 66.0
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 1.2e-27 126.3 87 74.7
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.2e-27 126.3 94 69.1
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.5e-27 125.9 93 71.0
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 2.0e-27 125.6 92 69.6
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 2.0e-27 125.6 89 70.8
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 2.0e-27 125.6 102 64.7
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 2.6e-27 125.2 96 74.0
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.6e-27 125.2 93 69.9
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 2.6e-27 125.2 92 67.4
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 2.6e-27 125.2 97 67.0
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.5e-27 124.4 93 67.7
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.0e-26 123.2 91 70.3
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.0e-26 123.2 94 67.0
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 1.3e-26 122.9 92 67.4
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.3e-26 122.9 92 67.4
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.3e-26 122.9 93 67.7
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.3e-26 122.9 93 69.9
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.3e-26 122.9 103 63.1
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 3.8e-26 121.3 91 68.1
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 4.9e-26 120.9 88 68.2
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 4.9e-26 120.9 91 67.0
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 4.9e-26 120.9 89 70.8
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 8.4e-26 120.2 89 74.2
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 1.1e-25 119.8 91 69.2
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.1e-25 119.8 101 65.3
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.4e-25 119.4 91 65.9
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.9e-25 119.0 87 70.1
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 1.9e-25 119.0 96 66.7
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 2.5e-25 118.6 93 66.7
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 7.1e-25 117.1 98 66.3
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 7.1e-25 117.1 98 66.3
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 9.3e-25 116.7 95 68.4
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 9.3e-25 116.7 93 66.7
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 9.3e-25 116.7 93 66.7
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.2e-24 116.3 98 65.3
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 1.2e-24 116.3 96 66.7
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.2e-24 116.3 93 64.5
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.6e-24 115.9 91 68.1
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 2.1e-24 115.5 97 66.0
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 2.1e-24 115.5 91 67.0
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 2.1e-24 115.5 101 65.3
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 2.7e-24 115.2 101 62.4
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 4.6e-24 114.4 90 68.9
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 6.0e-24 114.0 96 66.7
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 7.9e-24 113.6 96 65.6
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 7.9e-24 113.6 101 64.4
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 1.0e-23 113.2 88 68.2
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 1.0e-23 113.2 88 68.2
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.3e-23 112.8 89 69.7
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 1.8e-23 112.5 101 63.4
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 1.8e-23 112.5 100 61.0
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 1.8e-23 112.5 100 61.0
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.8e-23 112.5 87 66.7
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 1.8e-23 112.5 87 64.4
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 3.0e-23 111.7 92 68.5
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 3.0e-23 111.7 89 66.3
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 3.0e-23 111.7 85 68.2
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 3.9e-23 111.3 103 64.1
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 3.9e-23 111.3 89 61.8
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 3.9e-23 111.3 93 67.7
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 5.1e-23 110.9 101 64.4
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.7e-23 110.5 96 62.5
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.7e-23 110.5 96 62.5
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 8.7e-23 110.2 90 62.2
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 8.7e-23 110.2 99 58.6
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.1e-22 109.8 89 66.3
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.5e-22 109.4 98 64.3
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.5e-22 109.4 98 64.3
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.9e-22 109.0 98 64.3
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 2.5e-22 108.6 100 58.0
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 2.5e-22 108.6 81 70.4
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 3.3e-22 108.2 96 61.5
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 3.3e-22 108.2 54 92.6
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 5.7e-22 107.5 95 63.2
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 1.3e-21 106.3 90 63.3
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.6e-21 105.9 80 68.8
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 2.2e-21 105.5 89 62.9
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 2.8e-21 105.1 84 63.1
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 4.8e-21 104.4 79 68.4
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 6.3e-21 104.0 80 70.0
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 3.1e-20 101.7 76 69.7
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.2e-19 99.8 57 78.9
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 1.5e-19 99.4 76 71.1
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 2.6e-19 98.6 76 67.1
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 4.5e-19 97.8 86 62.8
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 5.9e-19 97.4 82 65.9
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.0e-18 96.7 103 55.3
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 2.2e-18 95.5 81 63.0
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 4.2e-17 91.3 85 61.2
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 7.2e-17 90.5 79 60.8
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 9.3e-17 90.1 75 61.3
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 3.6e-16 88.2 80 60.0
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 4.6e-16 87.8 66 68.2
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 1.0e-15 86.7 76 61.8
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.5e-14 82.0 77 53.2
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 5.7e-14 80.9 80 52.5
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.3e-13 79.7 79 57.0
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.3e-13 79.7 60 66.7
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 2.2e-13 79.0 54 72.2
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 2.8e-13 78.6 50 80.0
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 3.7e-13 78.2 85 55.3
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 3.7e-13 78.2 41 87.8
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 1.1e-12 76.6 56 64.3
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 6.1e-08 60.8 43 69.8
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 6.1e-08 60.8 43 69.8
Pp3c2_9610 Physcomitrium patens HOM05D007135 ORTHO05D008880 5.7e-06 54.3 40 65.0
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 9.7e-06 53.5 56 55.4


User provided reference genes

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