Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 9.5e-136 486.9 252 100.0
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 5.9e-61 238.4 128 97.7
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 4.1e-38 162.5 128 66.4
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 4.5e-37 159.1 128 63.3
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.1e-35 154.5 128 62.5
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 1.1e-35 154.5 128 59.4
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 3.3e-35 152.9 155 53.5
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 7.2e-35 151.8 155 52.3
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 9.5e-35 151.4 149 57.0
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 2.1e-34 150.2 127 61.4
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 2.1e-34 150.2 158 54.4
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 3.6e-34 149.4 155 52.3
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 8.0e-34 148.3 128 60.9
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 1.8e-33 147.1 129 60.5
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 3.0e-33 146.4 129 59.7
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 4.0e-33 146.0 128 53.9
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 5.2e-33 145.6 155 47.7
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 6.8e-33 145.2 127 54.3
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 8.9e-33 144.8 128 56.2
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 8.9e-33 144.8 128 57.0
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 1.2e-32 144.4 128 57.8
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 1.2e-32 144.4 127 55.1
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 1.2e-32 144.4 127 53.5
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 2.0e-32 143.7 154 53.9
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 2.0e-32 143.7 128 54.7
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 2.6e-32 143.3 154 53.2
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 5.7e-32 142.1 155 45.2
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 7.5e-32 141.7 128 58.6
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 7.5e-32 141.7 128 58.6
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 7.5e-32 141.7 167 46.1
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 9.8e-32 141.4 127 57.5
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 9.8e-32 141.4 163 46.6
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 9.8e-32 141.4 129 55.8
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.3e-31 141.0 128 54.7
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 2.2e-31 140.2 128 57.0
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 2.2e-31 140.2 127 57.5
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 3.7e-31 139.4 127 55.9
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 3.7e-31 139.4 127 55.1
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 4.9e-31 139.0 129 55.0
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 4.9e-31 139.0 158 50.0
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 6.3e-31 138.7 128 55.5
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 1.1e-30 137.9 158 49.4
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 1.4e-30 137.5 127 54.3
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 1.4e-30 137.5 155 46.5
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 3.2e-30 136.3 127 55.1
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 3.2e-30 136.3 158 48.7
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 4.1e-30 136.0 155 45.2
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 5.4e-30 135.6 155 45.2
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 7.0e-30 135.2 158 48.7
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 7.0e-30 135.2 127 52.8
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 1.6e-29 134.0 129 51.2
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 1.6e-29 134.0 133 52.6
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 1.6e-29 134.0 128 52.3
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.0e-29 133.7 129 53.5
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 2.0e-29 133.7 127 53.5
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 2.7e-29 133.3 127 52.8
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 3.5e-29 132.9 128 53.1
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 4.5e-29 132.5 133 47.4
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 4.5e-29 132.5 127 52.0
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 5.9e-29 132.1 155 46.5
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 1.7e-28 130.6 158 48.7
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 2.3e-28 130.2 133 46.6
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.9e-28 129.8 129 50.4
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 3.9e-28 129.4 130 52.3
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 5.0e-28 129.0 127 51.2
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 5.0e-28 129.0 110 59.1
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 8.6e-28 128.3 128 51.6
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.1e-27 127.9 128 54.7
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 1.9e-27 127.1 128 53.9
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.9e-27 127.1 155 43.2
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 4.3e-27 125.9 128 51.6
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 7.3e-27 125.2 157 43.3
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 2.8e-26 123.2 167 42.5
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 2.8e-26 123.2 127 48.8
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 4.7e-26 122.5 162 45.1
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 1.0e-25 121.3 155 44.5
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 2.3e-25 120.2 127 50.4
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 4.0e-25 119.4 155 45.2
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 4.0e-25 119.4 125 49.6
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 7.5e-24 115.2 155 43.9
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 7.5e-24 115.2 128 46.9
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 2.2e-23 113.6 128 46.1
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 1.1e-22 111.3 128 42.2
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 1.4e-22 110.9 127 44.1
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 2.4e-22 110.2 128 42.2
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 2.4e-22 110.2 128 42.2
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 3.2e-22 109.8 84 66.7
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 3.2e-22 109.8 128 43.0
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 3.2e-22 109.8 127 46.5
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 7.0e-22 108.6 128 44.5
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 9.2e-22 108.2 127 44.1
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 1.6e-21 107.5 128 40.6
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 2.0e-21 107.1 152 38.2
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 4.6e-21 105.9 128 41.4
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 4.6e-21 105.9 128 41.4
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 1.7e-20 104.0 128 40.6
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 5.0e-20 102.4 155 38.1
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 1.9e-19 100.5 127 39.4
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 3.3e-19 99.8 110 48.2
RcHm_v2.0_Chr3g0481391 Rosa chinensis HOM05D006640 ORTHO05D008078 3.3e-19 99.8 84 59.5
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.0e-17 92.8 128 43.8
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 8.9e-17 91.7 85 52.9
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 1.4e-14 84.3 128 38.3
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 9.2e-14 81.6 90 46.7
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 1.0e-12 78.2 74 54.1
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 5.1e-12 75.9 127 33.9
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 9.5e-11 71.6 74 43.2
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 9.5e-11 71.6 130 37.7
EL10Ac8g18456 Beta vulgaris HOM05D001241 ORTHO05D001101 2.8e-10 70.1 101 47.5
AUR62010968 Chenopodium quinoa HOM05D001241 ORTHO05D001101 5.2e-09 65.9 99 47.5
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 6.8e-09 65.5 69 44.9
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 2.0e-08 63.9 74 43.2
ECA240G3496 Erigeron canadensis HOM05D001241 ORTHO05D001101 4.4e-08 62.8 96 44.8
Ah.09g231040 Amaranthus hybridus HOM05D001241 ORTHO05D001101 2.9e-07 60.1 100 44.0
Ah.14g082170 Amaranthus hybridus HOM05D001241 ORTHO05D001101 2.9e-07 60.1 102 43.1
Manes.16G114500 Manihot esculenta HOM05D001241 ORTHO05D001101 6.4e-07 58.9 99 44.4
Hund26213 Selenicereus undatus HOM05D001241 ORTHO05D001101 8.3e-07 58.5 106 37.7
Sc08g0007480 Simmondsia chinensis HOM05D001241 ORTHO05D001101 1.1e-06 58.2 102 42.2
Phvul.006G060400 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 1.9e-06 57.4 45 57.8
TPR.G23505 Trifolium pratense HOM05D001241 ORTHO05D001101 2.4e-06 57.0 98 42.9
FvH4_1g04490 Fragaria vesca HOM05D001241 ORTHO05D001101 3.2e-06 56.6 101 43.6
FAN19G1854 Fragaria x ananassa HOM05D001241 ORTHO05D001101 3.2e-06 56.6 101 43.6
FAN26G2875 Fragaria x ananassa HOM05D001241 ORTHO05D001101 3.2e-06 56.6 101 43.6
FAN28G0767 Fragaria x ananassa HOM05D001241 ORTHO05D001101 3.2e-06 56.6 101 43.6
HanXRQChr09g0239651 Helianthus annuus HOM05D001241 ORTHO05D001101 3.2e-06 56.6 96 41.7
Nn2g11709 Nelumbo nucifera HOM05D001241 ORTHO05D001101 4.1e-06 56.2 99 43.4
Prupe.7G232900 Prunus persica HOM05D001241 ORTHO05D001101 5.4e-06 55.8 102 42.2
Gohir.D13G201900 Gossypium hirsutum HOM05D001241 ORTHO05D001101 7.1e-06 55.5 98 43.9
Ca_17331_v3 Cicer arietinum L. HOM05D001241 ORTHO05D001101 9.2e-06 55.1 99 41.4


User provided reference genes

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