Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03351 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.9e-46 188.7 90 100.0
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 7.3e-22 107.1 54 98.1
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 2.8e-13 78.6 57 66.7
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.1e-12 76.6 58 67.2
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 2.4e-12 75.5 57 66.7
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 2.4e-12 75.5 57 66.7
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 3.1e-12 75.1 57 68.4
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 3.1e-12 75.1 58 65.5
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 4.0e-12 74.7 57 66.7
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 5.3e-12 74.3 57 68.4
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 5.3e-12 74.3 56 67.9
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 6.9e-12 73.9 57 66.7
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 6.9e-12 73.9 57 66.7
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 6.9e-12 73.9 57 68.4
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 6.9e-12 73.9 57 66.7
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 9.0e-12 73.6 58 65.5
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 1.2e-11 73.2 55 67.3
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 2.0e-11 72.4 59 59.3
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 7.6e-11 70.5 57 70.2
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 7.6e-11 70.5 58 62.1
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 2.2e-10 68.9 57 61.4
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 3.8e-10 68.2 58 60.3
MD08G1245200 Malus domestica HOM05D006640 ORTHO05D008078 4.9e-10 67.8 45 75.6
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 6.4e-10 67.4 58 56.9
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 6.4e-10 67.4 57 61.4
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 6.4e-10 67.4 56 58.9
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 8.4e-10 67.0 59 52.5
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 8.4e-10 67.0 58 60.3
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 1.1e-09 66.6 54 64.8
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 1.1e-09 66.6 59 62.7
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 1.9e-09 65.9 58 53.4
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 1.9e-09 65.9 55 61.8
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.4e-09 65.5 46 69.6
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 2.4e-09 65.5 56 57.1
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 2.4e-09 65.5 59 55.9
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 3.2e-09 65.1 56 58.9
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 3.2e-09 65.1 59 59.3
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 3.2e-09 65.1 59 59.3
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 3.2e-09 65.1 59 59.3
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 5.4e-09 64.3 56 57.1
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 7.1e-09 63.9 55 58.2
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 9.3e-09 63.5 56 57.1
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 9.3e-09 63.5 56 60.7
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 9.3e-09 63.5 55 58.2
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 9.3e-09 63.5 57 61.4
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 9.3e-09 63.5 57 57.9
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 1.2e-08 63.2 57 61.4
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 1.6e-08 62.8 57 57.9
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 2.1e-08 62.4 58 63.8
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 2.1e-08 62.4 55 61.8
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 2.1e-08 62.4 60 61.7
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 2.7e-08 62.0 60 53.3
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 2.7e-08 62.0 56 57.1
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 2.7e-08 62.0 60 58.3
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.7e-08 62.0 57 61.4
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 3.5e-08 61.6 56 55.4
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 4.6e-08 61.2 54 59.3
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 4.6e-08 61.2 55 56.4
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 6.0e-08 60.8 57 54.4
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 6.0e-08 60.8 59 55.9
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 1.3e-07 59.7 55 56.4
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 2.3e-07 58.9 57 56.1
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 3.0e-07 58.5 56 53.6
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 5.1e-07 57.8 56 53.6
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 8.7e-07 57.0 56 51.8
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 8.7e-07 57.0 57 54.4
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 2.5e-06 55.5 55 49.1
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 3.3e-06 55.1 58 55.2
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 3.3e-06 55.1 59 55.9
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 3.3e-06 55.1 56 55.4
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 4.3e-06 54.7 58 53.4
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 7.3e-06 53.9 58 55.2
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 7.3e-06 53.9 35 68.6
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 9.6e-06 53.5 34 67.6


User provided reference genes

Program Settings