Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 0.0e+00 1594.3 898 100.0
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 8.0e-161 572.0 984 40.5
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 8.6e-131 472.2 989 35.7
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 7.6e-119 432.6 880 37.3
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 1.5e-114 418.3 566 44.7
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 1.4e-112 411.8 602 42.2
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 6.9e-112 409.5 571 41.3
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 8.7e-107 392.5 647 38.9
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 5.6e-106 389.8 602 39.4
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 2.4e-104 384.4 669 37.2
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.2e-103 382.1 676 37.4
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 7.6e-103 379.4 595 40.8
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.7e-102 378.3 1017 32.3
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 4.9e-102 376.7 980 34.7
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.4e-101 375.2 741 35.9
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 3.9e-99 367.1 913 34.2
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 2.8e-97 360.9 660 35.8
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 4.8e-97 360.1 679 37.1
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 2.4e-96 357.8 1248 28.8
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 5.3e-96 356.7 1067 33.2
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 2.6e-95 354.4 519 40.3
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.0e-94 352.4 594 37.4
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 2.5e-93 347.8 617 36.1
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 4.2e-93 347.1 667 35.5
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 1.2e-92 345.5 1248 28.6
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 2.1e-92 344.7 666 35.4
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 2.7e-92 344.4 666 35.0
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 6.0e-92 343.2 620 36.1
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 6.0e-92 343.2 503 41.9
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 7.9e-92 342.8 666 35.3
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 1.3e-91 342.0 946 32.2
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 5.1e-91 340.1 884 31.4
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 1.5e-90 338.6 1001 30.7
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 5.7e-90 336.7 605 34.7
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.3e-89 335.5 990 30.4
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.4e-88 332.0 1015 30.0
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.8e-88 331.6 1017 30.2
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.2e-87 328.9 664 33.0
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 5.9e-87 326.6 1019 30.2
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 5.9e-87 326.6 1040 29.6
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.2e-86 324.7 1043 30.2
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 8.5e-86 322.8 671 35.5
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 6.7e-83 313.2 585 36.6
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 2.8e-81 307.8 518 38.0
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 4.8e-81 307.0 1024 32.6
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 4.8e-81 307.0 997 30.4
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 4.8e-81 307.0 667 33.6
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 8.2e-81 306.2 518 37.6
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 6.9e-80 303.1 520 37.1
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.5e-79 302.0 578 32.5
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 2.0e-79 301.6 995 28.7
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 3.4e-79 300.8 542 36.7
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.4e-77 295.4 579 33.0
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 2.5e-77 294.7 986 29.5
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 5.5e-77 293.5 574 33.6
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 2.7e-76 291.2 997 28.6
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.6e-76 290.8 987 29.5
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 3.6e-76 290.8 727 31.9
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 4.7e-76 290.4 669 33.8
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 1.0e-75 289.3 1017 28.2
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 2.3e-75 288.1 906 29.9
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 6.7e-75 286.6 583 32.8
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 8.8e-75 286.2 544 36.0
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 5.7e-74 283.5 657 31.7
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 1.3e-73 282.3 997 28.8
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 8.2e-73 279.6 613 33.3
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 1.1e-72 279.3 980 29.2
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 4.1e-72 277.3 678 31.1
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 5.3e-72 276.9 539 35.4
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 1.2e-71 275.8 996 27.3
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.0e-70 272.7 662 31.7
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 2.2e-70 271.6 823 27.1
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 3.2e-69 267.7 867 28.1
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 9.4e-69 266.2 981 30.3
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 1.0e-67 262.7 1051 26.4
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.0e-67 262.7 582 33.2
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 3.9e-67 260.8 734 30.5
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 1.1e-64 252.7 894 28.5
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 3.5e-63 247.7 959 27.3
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 7.7e-63 246.5 585 33.0
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 1.3e-62 245.7 1044 26.1
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 5.0e-62 243.8 607 31.6
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 5.0e-62 243.8 882 28.9
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 9.4e-61 239.6 454 34.1
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 2.7e-60 238.0 324 38.9
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 2.6e-58 231.5 874 26.2
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 2.2e-57 228.4 927 27.3
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 8.2e-57 226.5 907 27.9
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 5.3e-56 223.8 927 27.1
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 2.0e-55 221.9 979 25.4
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.1e-53 216.1 339 38.6
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 3.2e-53 214.5 380 35.3
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 3.6e-52 211.1 911 27.0
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 6.1e-52 210.3 931 26.4
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 1.0e-51 209.5 849 28.0
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 4.0e-51 207.6 923 27.4
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 7.5e-50 203.4 323 37.2
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 2.8e-49 201.4 925 27.4
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 2.7e-47 194.9 931 26.7
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 1.0e-46 193.0 184 50.0
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 1.0e-43 183.0 558 28.1
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 5.0e-38 164.1 350 33.7
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.9e-37 162.2 383 31.6
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.5e-37 161.8 387 31.3
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 8.9e-35 153.3 290 34.5
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 7.5e-34 150.2 472 25.8
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 9.2e-32 143.3 179 43.0
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 3.3e-29 134.8 264 33.0
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 3.1e-27 128.3 262 35.9
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 7.5e-26 123.6 295 33.9
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 1.7e-25 122.5 294 33.7
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 1.9e-21 109.0 233 32.2
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 8.9e-19 100.1 91 52.7
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 1.0e-14 86.7 691 24.0
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 9.5e-13 80.1 189 27.5
CDE05G3494 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 6.8e-11 73.9 198 33.3
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 3.8e-09 68.2 99 42.4
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 4.6e-07 61.2 118 33.1
Nn1g04267 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.7e-06 59.3 88 39.8


User provided reference genes

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