Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 1.8e-136 489.2 243 100.0
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 3.2e-96 355.5 247 71.7
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 1.6e-95 353.2 247 71.7
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 1.3e-94 350.1 233 72.1
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 5.1e-94 348.2 245 71.8
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 9.6e-93 344.0 234 71.4
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 1.3e-92 343.6 248 69.4
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 2.1e-92 342.8 233 71.7
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 3.6e-92 342.0 234 71.8
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 5.3e-91 338.2 234 69.7
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 2.0e-90 336.3 234 70.5
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 2.9e-89 332.4 237 68.8
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 2.4e-88 329.3 247 65.6
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 2.4e-88 329.3 234 68.4
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 7.1e-88 327.8 241 66.4
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 2.1e-87 326.2 239 66.5
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 3.5e-87 325.5 234 67.5
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 4.6e-87 325.1 234 68.8
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 2.3e-86 322.8 247 62.3
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 2.3e-86 322.8 225 69.8
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 5.1e-86 321.6 237 66.7
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 8.7e-86 320.9 234 67.1
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 1.1e-85 320.5 237 66.7
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 1.1e-85 320.5 235 66.0
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 1.9e-85 319.7 225 68.4
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 2.5e-85 319.3 237 65.8
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 2.5e-85 319.3 232 67.2
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 9.6e-85 317.4 233 65.7
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 1.3e-84 317.0 234 66.2
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 3.7e-84 315.5 234 65.4
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 8.1e-84 314.3 235 64.7
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 4.0e-83 312.0 240 63.8
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 4.0e-83 312.0 228 65.8
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 6.9e-83 311.2 239 63.6
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 2.0e-82 309.7 235 64.3
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 3.4e-82 308.9 247 61.1
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 5.8e-82 308.1 303 54.8
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 1.3e-81 307.0 233 63.9
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 1.3e-81 307.0 247 60.7
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 3.8e-81 305.4 247 61.9
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 8.4e-81 304.3 233 65.2
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 8.4e-81 304.3 234 64.5
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 1.4e-80 303.5 244 62.7
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 1.9e-80 303.1 232 63.8
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 1.9e-80 303.1 234 64.1
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 5.5e-80 301.6 235 64.7
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 9.3e-80 300.8 240 61.7
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 1.6e-79 300.1 235 63.0
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 2.7e-79 299.3 232 63.8
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 1.0e-78 297.4 232 63.4
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 1.0e-78 297.4 235 63.0
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 1.3e-78 297.0 228 63.6
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 1.3e-78 297.0 223 65.0
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 3.0e-78 295.8 232 62.5
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 3.0e-78 295.8 250 62.4
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 3.0e-78 295.8 237 60.8
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 3.0e-78 295.8 249 61.0
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 3.9e-78 295.4 235 62.6
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 1.1e-77 293.9 234 62.0
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 1.5e-77 293.5 236 61.4
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 1.9e-77 293.1 240 62.5
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 1.9e-77 293.1 240 62.5
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 1.9e-77 293.1 234 61.5
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 2.5e-77 292.7 232 62.1
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 2.5e-77 292.7 235 60.0
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 9.6e-77 290.8 274 55.1
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 1.3e-76 290.4 213 65.7
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 1.6e-76 290.0 234 61.1
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 2.1e-76 289.7 239 61.5
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 2.1e-76 289.7 257 60.7
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 2.8e-76 289.3 234 61.5
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 6.2e-76 288.1 235 61.3
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 1.1e-75 287.3 240 58.8
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 1.4e-75 287.0 223 62.8
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 1.4e-75 287.0 235 61.7
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 1.8e-75 286.6 235 61.3
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 3.1e-75 285.8 225 60.4
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 6.9e-75 284.6 219 64.4
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 1.5e-74 283.5 241 59.3
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 2.0e-74 283.1 285 52.6
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 2.6e-74 282.7 223 62.8
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 4.5e-74 282.0 235 60.4
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 7.6e-74 281.2 246 56.9
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 2.9e-73 279.3 244 55.7
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 4.2e-72 275.4 186 71.0
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 3.5e-71 272.3 297 52.9
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 5.1e-70 268.5 233 55.4
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 5.1e-70 268.5 186 68.8
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 1.5e-69 266.9 200 63.0
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 5.7e-69 265.0 232 55.2
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 9.7e-69 264.2 246 54.5
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 3.4e-66 255.8 215 57.7
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 5.0e-65 251.9 230 53.0
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 8.5e-65 251.1 184 64.1
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 8.5e-65 251.1 209 57.4
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 4.6e-63 245.4 228 55.7
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 3.0e-62 242.7 184 64.7
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 8.8e-62 241.1 232 53.0
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 7.4e-61 238.0 234 54.7
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.8e-60 236.1 190 61.6
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 2.6e-53 213.0 152 64.5
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 6.3e-52 208.4 152 67.1
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 5.0e-41 172.2 220 42.3
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 2.0e-34 150.2 117 61.5
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 6.1e-31 138.7 223 40.4
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.9e-24 117.1 224 37.1
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 4.2e-24 115.9 224 36.6
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 5.2e-22 109.0 213 35.2
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 8.3e-20 101.7 181 35.4
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 2.0e-18 97.1 244 28.3
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 2.9e-17 93.2 84 57.1
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 2.9e-17 93.2 112 46.4
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 2.5e-16 90.1 134 46.3
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 5.6e-16 89.0 165 32.1
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 5.2e-14 82.4 58 67.2
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.7e-12 77.4 67 53.7


User provided reference genes

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