Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 0.0e+00 1596.3 837 100.0
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 0.0e+00 1314.3 840 82.0
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 0.0e+00 1306.2 840 80.6
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 0.0e+00 1291.6 841 79.8
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 0.0e+00 1289.6 840 79.4
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 0.0e+00 1286.9 840 79.9
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 0.0e+00 1279.2 838 79.4
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 0.0e+00 1278.5 840 79.2
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 0.0e+00 1277.3 842 79.0
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 0.0e+00 1276.5 840 78.9
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 0.0e+00 1274.6 839 79.3
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 0.0e+00 1274.2 841 79.5
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 0.0e+00 1273.8 841 79.0
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 0.0e+00 1272.7 841 78.6
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1268.4 838 78.3
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 0.0e+00 1266.1 838 78.0
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 0.0e+00 1265.8 841 78.5
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 0.0e+00 1265.0 849 79.4
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 0.0e+00 1265.0 842 78.0
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1263.1 838 77.9
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1261.9 838 77.9
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 0.0e+00 1258.8 841 78.4
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 0.0e+00 1257.7 849 79.2
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 0.0e+00 1257.7 836 77.8
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 0.0e+00 1256.5 840 78.2
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1256.1 840 77.0
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 0.0e+00 1251.1 840 77.6
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 0.0e+00 1250.3 840 77.9
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1246.9 858 76.0
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 0.0e+00 1246.5 841 77.2
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 0.0e+00 1245.7 841 76.2
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 0.0e+00 1244.2 841 76.9
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 0.0e+00 1244.2 840 76.9
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 0.0e+00 1224.9 841 76.0
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 0.0e+00 1223.4 848 75.1
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 0.0e+00 1222.2 841 76.0
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 0.0e+00 1221.1 841 74.6
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 0.0e+00 1220.3 840 76.2
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 0.0e+00 1219.9 843 76.0
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 0.0e+00 1219.1 841 75.5
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 0.0e+00 1217.6 841 75.4
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 0.0e+00 1217.2 841 75.5
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 0.0e+00 1216.8 842 74.6
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 0.0e+00 1215.7 840 75.8
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 0.0e+00 1213.0 843 74.1
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 0.0e+00 1209.9 840 75.7
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 0.0e+00 1209.1 842 74.3
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 0.0e+00 1208.4 839 74.5
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 0.0e+00 1208.0 929 69.5
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 0.0e+00 1207.6 842 74.5
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 0.0e+00 1207.2 840 75.0
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 0.0e+00 1206.4 840 75.1
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 0.0e+00 1206.0 842 74.3
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 0.0e+00 1203.0 842 74.1
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 0.0e+00 1199.9 841 75.5
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 0.0e+00 1199.5 836 75.5
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 0.0e+00 1199.1 830 75.7
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 0.0e+00 1198.7 841 73.5
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 0.0e+00 1198.0 840 73.1
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 0.0e+00 1197.2 842 73.6
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 0.0e+00 1195.3 840 73.9
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 0.0e+00 1193.7 840 75.0
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 0.0e+00 1193.7 842 73.6
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 0.0e+00 1193.7 838 73.6
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1192.6 840 74.0
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 0.0e+00 1190.6 838 73.5
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 0.0e+00 1190.6 858 71.7
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 0.0e+00 1189.9 744 82.4
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 0.0e+00 1189.5 858 71.6
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 0.0e+00 1189.5 841 74.8
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1189.1 836 74.0
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 0.0e+00 1187.9 840 74.9
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 0.0e+00 1186.4 839 73.4
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1186.0 839 73.4
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 0.0e+00 1184.9 841 73.2
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 0.0e+00 1182.9 843 73.0
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1181.0 843 73.1
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 0.0e+00 1180.6 841 72.2
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 0.0e+00 1180.6 841 72.3
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1179.1 842 72.8
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 0.0e+00 1174.5 838 73.5
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 0.0e+00 1169.5 840 72.4
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 0.0e+00 1166.0 839 73.5
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 0.0e+00 1161.7 840 71.5
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 0.0e+00 1161.4 840 72.5
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 0.0e+00 1154.8 841 71.7
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 0.0e+00 1145.6 839 70.4
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 0.0e+00 1144.0 809 74.0
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 0.0e+00 1129.0 840 69.4
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 0.0e+00 1120.9 863 70.7
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 0.0e+00 1114.4 1001 61.5
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 0.0e+00 1105.5 725 78.8
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 0.0e+00 1103.2 857 68.1
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 0.0e+00 1099.0 839 69.2
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 0.0e+00 1097.8 838 70.5
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 0.0e+00 1088.9 840 67.4
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 6.9e-292 1007.3 721 71.8
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 2.0e-286 989.2 838 65.9
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 8.5e-282 973.8 684 73.1
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 4.7e-256 888.3 852 56.9
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 1.0e-250 870.5 861 55.5
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 4.0e-231 805.4 839 53.4
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 7.1e-228 794.7 523 78.8
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 3.9e-226 788.9 750 56.9
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 1.1e-223 780.8 547 72.4
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 7.8e-219 764.6 609 65.7
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 1.9e-217 760.0 617 67.1
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.7e-213 746.9 545 68.8
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 1.6e-203 713.8 509 74.5
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 5.7e-193 678.7 560 66.8
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 8.2e-192 674.9 908 45.7
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 2.5e-185 653.3 428 79.2
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 1.6e-179 634.0 447 74.7
FAN10G1756 Fragaria x ananassa HOM05D004547 ORTHO05D005133 5.7e-161 572.4 438 69.9
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 4.2e-148 529.6 397 67.8
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 6.3e-144 515.8 465 62.6
COL.COLO4_14122 Corchorus olitorius HOM05D004547 ORTHO05D005133 3.5e-142 510.0 344 78.5
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 2.3e-117 427.6 375 62.4
SHI14003 Sapria himalayana HOM05D004547 ORTHO05D000023 1.0e-109 402.1 338 63.3
BraA02t06300Z Brassica rapa HOM05D004547 ORTHO05D005133 9.6e-108 395.6 294 73.8
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 4.7e-107 393.3 428 53.0
A10p09160 Brassica napus HOM05D004547 ORTHO05D005133 1.6e-99 368.2 235 76.2
BolC2t08183H Brassica oleracea HOM05D004547 ORTHO05D005133 1.4e-98 365.2 235 76.2
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 3.1e-98 364.0 862 32.1
Nitab4.5_0019601g0010 Nicotiana tabacum HOM05D004547 ORTHO05D005133 9.0e-98 362.5 253 75.9
SEGI_24302 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 6.0e-78 296.6 211 70.1
Cre02.g086700 Chlamydomonas reinhardtii HOM05D004547 ORTHO05D005133 3.8e-72 277.3 865 27.6
CDE04G2539 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.4e-69 268.9 265 58.9
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 4.3e-68 263.8 230 64.3
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 5.5e-63 246.9 200 68.0
HPP92_005318 Vanilla planifolia HOM05D004547 ORTHO05D005133 5.3e-58 230.3 289 47.1
Os06g0669600 Oryza sativa ssp. japonica HOM05D004547 ORTHO05D005133 8.5e-56 223.0 176 68.8
QL10p003704 Quercus lobata HOM05D004547 ORTHO05D005133 8.2e-51 206.5 209 60.8
Actinidia24695 Actinidia chinensis HOM05D004547 ORTHO05D005133 1.6e-49 202.2 182 58.8
A10p09220 Brassica napus HOM05D004547 ORTHO05D005133 5.7e-44 183.7 121 72.7
MD07G1253700 Malus domestica HOM05D004547 ORTHO05D005133 6.3e-43 180.3 105 91.4
TPR.G196 Trifolium pratense HOM05D004547 ORTHO05D005133 1.7e-40 172.2 123 72.4
BraA10t43007Z Brassica rapa HOM05D004547 ORTHO05D005133 9.4e-39 166.4 104 76.9
BraA10t42999Z Brassica rapa HOM05D004547 ORTHO05D005133 2.1e-38 165.2 104 76.9
BraA10t43002Z Brassica rapa HOM05D004547 ORTHO05D005133 1.2e-33 149.4 96 72.9
TAR082G0001 Trochodendron aralioides HOM05D004547 ORTHO05D005133 1.2e-33 149.4 98 80.6
A10p09300 Brassica napus HOM05D004547 ORTHO05D005133 2.7e-33 148.3 96 72.9
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 4.2e-31 141.0 234 39.3
Sc14g0005510 Simmondsia chinensis HOM05D004547 ORTHO05D005133 1.6e-30 139.0 96 77.1
Psat7g163200 Pisum sativum HOM05D004547 ORTHO05D005133 3.4e-28 131.3 142 49.3
SEGI_13446 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 4.4e-28 131.0 96 72.9
Actinidia01052 Actinidia chinensis HOM05D004547 ORTHO05D005133 4.5e-25 120.9 96 68.8
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 1.3e-24 119.4 179 41.9
FvH4_7g19100 Fragaria vesca HOM05D004547 ORTHO05D005133 8.6e-24 116.7 87 75.9
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 2.8e-22 111.7 216 36.6
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 1.8e-21 109.0 248 34.7
GSVIVG01036042001 Vitis vinifera HOM05D004547 ORTHO05D005133 4.0e-21 107.8 144 44.4
CAN.G689.6 Capsicum annuum HOM05D004547 ORTHO05D005133 6.8e-21 107.1 82 68.3
SEGI_29591 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 7.5e-20 103.6 99 46.5
FAN06G3837 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.7e-17 95.1 72 73.6
Haze_23095 Corylus avellana HOM05D001506 ORTHO05D000455 1.3e-16 92.8 78 70.5
Duzib147G0620 Durio zibethinus HOM05D004547 ORTHO05D005133 5.0e-16 90.9 71 69.0
CAN.G118.7 Capsicum annuum HOM05D004547 ORTHO05D005133 2.4e-10 72.0 58 63.8
Nitab4.5_0011021g0010 Nicotiana tabacum HOM05D001522 ORTHO05D016189 1.2e-09 69.7 161 32.9
Pp3c11_26770 Physcomitrium patens HOM05D004547 ORTHO05D005133 4.3e-07 61.2 67 49.3
Nitab4.5_0008254g0010 Nicotiana tabacum HOM05D017975 ORTHO05D016189 5.6e-07 60.8 129 34.1
CAN.G689.5 Capsicum annuum HOM05D004547 ORTHO05D005133 3.6e-06 58.2 61 47.5


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