Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 1.1e-159 566.6 293 100.0
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 1.3e-120 436.8 298 76.5
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 8.5e-120 434.1 304 73.4
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.8e-117 426.4 297 73.7
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 3.0e-117 425.6 298 72.8
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 3.0e-117 425.6 298 73.5
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 9.7e-116 420.6 295 74.6
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 2.2e-115 419.5 298 72.8
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.1e-114 417.2 294 74.5
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 2.4e-114 416.0 299 72.6
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 1.6e-113 413.3 294 74.1
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 2.6e-113 412.5 295 73.6
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 3.5e-113 412.1 298 72.1
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 3.5e-113 412.1 294 74.5
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 4.5e-113 411.8 295 72.5
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 4.5e-113 411.8 299 72.6
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 5.9e-113 411.4 298 72.1
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 7.7e-113 411.0 295 72.2
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 1.0e-112 410.6 299 70.9
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 2.9e-112 409.1 297 72.7
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 3.8e-112 408.7 299 70.9
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 6.5e-112 407.9 298 69.5
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 8.5e-112 407.5 294 71.8
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 1.5e-111 406.8 295 72.9
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 3.2e-111 405.6 296 71.6
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 4.2e-111 405.2 300 70.7
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 7.2e-111 404.4 298 71.1
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 7.2e-111 404.4 295 72.2
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 9.4e-111 404.1 298 71.1
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.2e-110 403.7 298 70.8
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 1.6e-110 403.3 299 71.9
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 1.6e-110 403.3 295 72.2
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 2.1e-110 402.9 297 72.4
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 3.6e-110 402.1 298 70.8
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 6.1e-110 401.4 299 71.9
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 8.0e-110 401.0 301 71.8
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 2.3e-109 399.4 303 68.3
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 3.0e-109 399.1 299 70.2
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 4.0e-109 398.7 299 70.9
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 5.2e-109 398.3 300 71.3
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 6.7e-109 397.9 298 70.1
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 8.8e-109 397.5 298 70.1
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 8.8e-109 397.5 294 70.7
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 1.2e-108 397.1 294 69.7
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 2.0e-108 396.4 300 71.0
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 4.4e-108 395.2 294 70.4
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 5.7e-108 394.8 296 70.6
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 5.7e-108 394.8 295 70.8
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 5.7e-108 394.8 295 70.8
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 7.5e-108 394.4 294 69.7
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.7e-107 393.3 296 70.6
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 2.2e-107 392.9 313 67.1
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 3.7e-107 392.1 302 69.5
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.3e-107 391.3 300 68.7
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 8.3e-107 391.0 298 71.1
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 8.3e-107 391.0 296 70.3
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 8.3e-107 391.0 300 69.7
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.1e-106 389.0 300 68.3
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 4.1e-106 388.7 294 67.7
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 5.3e-106 388.3 298 70.5
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.3e-106 388.3 294 69.7
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.0e-106 387.9 300 68.3
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 9.1e-106 387.5 295 70.8
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 1.6e-105 386.7 300 68.0
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 1.6e-105 386.7 296 68.6
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 2.0e-105 386.3 295 68.1
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.7e-105 386.0 300 68.0
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 4.5e-105 385.2 300 67.7
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 4.5e-105 385.2 294 69.0
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 5.9e-105 384.8 294 69.4
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 7.7e-105 384.4 299 67.2
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 1.0e-104 384.0 294 67.7
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 1.7e-104 383.3 296 70.9
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 1.7e-104 383.3 228 82.5
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 6.5e-104 381.3 298 69.5
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 3.2e-103 379.0 295 69.5
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 7.2e-103 377.9 297 68.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 1.2e-102 377.1 302 68.2
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 1.6e-102 376.7 294 69.0
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 2.1e-102 376.3 299 66.6
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 2.1e-102 376.3 299 66.9
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 3.6e-102 375.6 294 68.0
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 1.0e-101 374.0 299 65.6
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 1.0e-101 374.0 295 65.8
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 1.8e-101 373.2 296 68.9
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 1.8e-101 373.2 296 68.9
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 1.8e-101 373.2 296 68.9
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 2.3e-101 372.9 297 69.4
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 2.3e-101 372.9 297 69.4
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 2.3e-101 372.9 294 67.7
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 2.3e-101 372.9 295 67.1
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 4.0e-101 372.1 234 79.9
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.5e-100 370.2 296 66.2
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 3.4e-100 369.0 296 66.9
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 3.4e-100 369.0 294 67.3
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 2.2e-99 366.3 300 65.0
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 4.8e-99 365.2 296 67.6
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 6.3e-99 364.8 296 66.9
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 4.1e-98 362.1 247 74.1
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 9.1e-98 360.9 234 77.8
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.7e-96 356.7 273 70.0
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 6.6e-96 354.8 283 67.5
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 1.5e-95 353.6 300 66.3
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 1.9e-95 353.2 295 64.7
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.4e-90 337.0 258 67.4
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 3.9e-88 328.9 285 62.1
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 1.2e-86 323.9 291 62.9
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.8e-86 322.8 205 79.5
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 5.8e-84 315.1 228 69.3
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 9.2e-82 307.8 304 55.9
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.2e-81 307.4 221 68.8
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 5.0e-80 302.0 225 68.0
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 2.7e-73 279.6 228 60.5
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 2.3e-72 276.6 203 67.5
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 4.0e-61 239.2 215 60.9
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 5.2e-61 238.8 137 82.5
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 3.6e-54 216.1 137 72.3
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 4.8e-46 189.1 203 46.3
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 4.8e-46 189.1 202 46.0
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 2.5e-39 166.8 220 41.4
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 1.3e-35 154.5 89 87.6
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 7.1e-34 148.7 83 88.0
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 1.2e-33 147.9 95 75.8
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 3.5e-25 119.8 64 85.9
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 5.1e-08 62.8 83 48.2


User provided reference genes

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