Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 5.3e-173 610.9 305 100.0
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 5.0e-107 391.7 302 66.6
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 5.6e-106 388.3 298 65.4
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 2.3e-104 382.9 305 65.6
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 1.5e-103 380.2 305 66.6
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 2.0e-103 379.8 305 64.3
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 5.8e-103 378.3 312 65.4
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 5.8e-103 378.3 335 60.0
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.3e-102 377.1 229 77.7
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 3.7e-102 375.6 305 62.0
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 2.0e-100 369.8 305 62.6
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 6.0e-100 368.2 230 76.1
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 2.3e-99 366.3 305 61.0
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 3.0e-99 365.9 370 54.3
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 8.6e-99 364.4 305 61.3
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 8.6e-99 364.4 305 60.7
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 1.1e-98 364.0 220 79.5
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 1.9e-98 363.2 307 59.9
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 2.5e-98 362.8 305 61.3
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 3.3e-98 362.5 278 64.7
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 4.3e-98 362.1 305 62.0
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 1.2e-97 360.5 307 62.5
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 2.8e-97 359.4 223 77.1
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 2.8e-97 359.4 302 58.9
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 1.1e-96 357.5 279 64.2
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.1e-96 357.5 310 60.6
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 1.4e-96 357.1 295 62.7
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 6.8e-96 354.8 310 58.4
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 8.9e-96 354.4 305 60.3
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 1.2e-95 354.0 309 59.2
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 7.5e-95 351.3 326 57.1
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 1.7e-94 350.1 239 70.3
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 2.2e-94 349.7 292 60.6
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 3.7e-94 349.0 307 60.6
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 3.7e-94 349.0 301 61.8
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 4.9e-94 348.6 301 60.8
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 8.3e-94 347.8 319 57.7
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.4e-93 347.1 319 58.0
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 1.4e-93 347.1 306 60.8
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.9e-93 346.7 305 59.3
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 3.2e-93 345.9 235 72.3
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 2.1e-92 343.2 277 62.8
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 2.1e-92 343.2 302 59.6
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 2.1e-92 343.2 306 60.8
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 2.1e-92 343.2 311 58.2
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 6.0e-92 341.7 286 60.1
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 3.9e-91 339.0 312 57.4
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 5.1e-91 338.6 305 56.7
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 4.3e-90 335.5 233 68.7
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 5.6e-90 335.1 305 59.3
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 7.3e-90 334.7 233 68.2
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 1.2e-89 334.0 231 68.8
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 1.6e-89 333.6 293 61.1
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 2.8e-89 332.8 233 67.8
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 2.8e-89 332.8 303 58.1
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 6.2e-89 331.6 233 68.2
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 8.1e-89 331.3 231 68.0
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 1.1e-88 330.9 232 67.7
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 3.1e-88 329.3 243 67.5
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 4.0e-88 328.9 231 67.5
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 2.0e-87 326.6 307 59.0
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 2.6e-87 326.2 243 65.4
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 3.4e-87 325.9 257 64.6
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 5.8e-87 325.1 329 54.4
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 5.8e-87 325.1 233 67.0
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 8.4e-86 321.2 231 65.8
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 8.4e-86 321.2 246 63.8
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 8.4e-86 321.2 294 57.1
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 8.4e-86 321.2 279 59.1
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 1.1e-85 320.9 246 63.8
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 2.4e-85 319.7 245 64.9
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 7.1e-85 318.2 197 73.6
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 9.2e-85 317.8 205 69.8
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 2.7e-84 316.2 292 59.6
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 4.6e-84 315.5 278 58.3
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 5.1e-83 312.0 226 65.0
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 1.9e-82 310.1 206 73.3
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 1.1e-80 304.3 294 53.7
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 1.8e-80 303.5 222 65.3
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 3.1e-80 302.8 307 53.4
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 2.6e-79 299.7 175 81.7
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 3.9e-75 285.8 274 56.6
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 2.5e-74 283.1 278 55.8
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 5.6e-74 282.0 317 50.8
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 2.8e-73 279.6 305 52.5
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 1.9e-66 256.9 300 50.7
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 1.3e-65 254.2 173 72.3
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 9.9e-63 244.6 234 54.7
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 3.2e-61 239.6 274 50.0
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 3.2e-61 239.6 258 53.5
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 1.6e-60 237.3 448 36.4
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 3.3e-58 229.6 226 52.7
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 1.6e-57 227.3 172 63.4
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 3.8e-54 216.1 224 47.8
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 8.7e-51 204.9 212 44.8
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 2.5e-50 203.4 274 45.6
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 5.7e-50 202.2 207 48.3
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 1.6e-49 200.7 157 60.5
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 2.1e-49 200.3 202 54.0
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 5.3e-48 195.7 266 45.9
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 1.2e-47 194.5 239 48.5
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 1.2e-47 194.5 289 42.6
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 2.9e-46 189.9 115 77.4
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 3.9e-43 179.5 205 43.4
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 3.7e-41 172.9 155 58.7
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 5.1e-35 152.5 165 50.9
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 6.7e-35 152.1 280 40.0
unitig_747.g21345 Utricularia gibba HOM05D004613 ORTHO05D006095 2.6e-26 123.6 71 78.9
MCO14G439 Micromonas commoda HOM05D004613 ORTHO05D006095 5.3e-24 115.9 201 32.3
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 1.0e-22 111.7 69 69.6
MD04G1209900 Malus domestica HOM05D004613 ORTHO05D006095 6.7e-19 99.0 57 82.5
HanXRQChr13g0397031 Helianthus annuus HOM05D004613 ORTHO05D006095 1.2e-18 98.2 113 52.2
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 1.6e-12 77.8 98 42.9
A09p05250 Brassica napus HOM05D004613 ORTHO05D006095 3.4e-10 70.1 49 69.4
SEGI_04064 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 5.7e-10 69.3 52 59.6
Cre02.g117300 Chlamydomonas reinhardtii HOM05D004613 ORTHO05D006095 3.7e-09 66.6 168 29.2
C09p05710 Brassica napus HOM05D004613 ORTHO05D006095 1.2e-07 61.6 50 58.0
CSS0002320 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.9e-07 59.3 38 68.4
CSS0009134 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.9e-07 59.3 38 68.4
CSS0011661 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.9e-07 59.3 38 68.4
CSS0019992 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.9e-07 59.3 38 68.4
CSS0023662 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.9e-07 59.3 38 68.4
CSS0033019 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.9e-07 59.3 38 68.4
CSS0041443 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 5.9e-07 59.3 38 68.4
C04p20620 Brassica napus HOM05D000249 ORTHO05D032228 1.0e-06 58.5 30 76.7
C04p20640 Brassica napus HOM05D004613 ORTHO05D006095 1.0e-06 58.5 58 50.0
BolC4t23591H Brassica oleracea HOM05D004613 ORTHO05D006095 1.0e-06 58.5 58 50.0
C05p42320 Brassica napus HOM05D004613 ORTHO05D006095 3.8e-06 56.6 58 46.6
BolC5t32960H Brassica oleracea HOM05D004613 ORTHO05D006095 3.8e-06 56.6 58 46.6


User provided reference genes

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