Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 2.8e-297 1025.0 735 100.0
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 6.1e-74 283.1 776 34.4
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 8.8e-73 279.3 713 34.1
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 5.5e-59 233.4 714 37.0
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 1.3e-44 185.7 675 29.8
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 1.7e-44 185.3 673 30.2
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 3.7e-39 167.5 597 27.5
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 3.5e-37 161.0 687 26.2
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 8.6e-36 156.4 737 27.1
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 1.1e-35 156.0 644 26.4
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 9.8e-32 142.9 687 25.5
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 2.9e-31 141.4 676 23.7
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 4.6e-29 134.0 707 25.9
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 4.6e-29 134.0 656 25.8
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 4.6e-29 134.0 676 32.0
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 3.9e-28 131.0 676 23.7
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 8.6e-28 129.8 665 29.0
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 2.5e-27 128.3 579 28.5
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 3.3e-27 127.9 677 28.1
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.2e-26 125.9 256 32.8
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 2.8e-26 124.8 690 21.7
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 4.0e-25 120.9 323 28.5
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 5.8e-24 117.1 674 25.5
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 5.8e-24 117.1 738 27.4
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 1.3e-23 115.9 571 22.6
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 3.2e-22 111.3 671 28.8
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.6e-21 109.0 671 24.7
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 7.8e-21 106.7 266 38.3
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 7.8e-21 106.7 674 24.3
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 5.1e-20 104.0 671 27.6
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 6.6e-20 103.6 246 30.5
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.1e-19 102.8 686 25.8
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 3.3e-19 101.3 528 33.5
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 9.5e-19 99.8 271 29.5
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 2.1e-18 98.6 677 26.9
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 1.4e-17 95.9 140 37.1
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 6.8e-17 93.6 129 40.3
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 6.8e-17 93.6 681 26.6
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 6.8e-17 93.6 473 26.8
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 6.8e-17 93.6 676 22.8
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 2.0e-16 92.0 323 31.3
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 2.6e-16 91.7 627 22.6
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 4.4e-16 90.9 139 36.7
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 7.6e-16 90.1 670 29.1
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 7.6e-16 90.1 138 33.3
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 7.6e-16 90.1 673 25.3
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 9.9e-16 89.7 673 22.6
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 9.9e-16 89.7 142 40.1
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 9.9e-16 89.7 134 40.3
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 1.7e-15 89.0 695 25.0
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.2e-15 88.6 139 36.0
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 2.9e-15 88.2 423 24.6
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 2.9e-15 88.2 423 24.6
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 6.4e-15 87.0 257 26.5
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 1.4e-14 85.9 140 37.9
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.4e-14 85.1 141 36.9
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 3.2e-14 84.7 675 28.3
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 5.4e-14 84.0 322 35.4
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 5.4e-14 84.0 709 24.5
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 7.1e-14 83.6 686 28.7
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 9.2e-14 83.2 642 23.7
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 1.2e-13 82.8 253 28.1
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 4.6e-13 80.9 319 31.7
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 6.0e-13 80.5 671 22.7
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 7.8e-13 80.1 467 30.4
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 1.0e-12 79.7 265 35.5
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.0e-12 79.7 620 23.1
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.0e-12 79.7 689 27.4
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.3e-12 79.3 680 29.1
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.3e-12 79.3 689 27.4
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 1.3e-12 79.3 675 29.6
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 1.7e-12 79.0 144 36.8
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 2.3e-12 78.6 681 24.1
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 3.0e-12 78.2 140 37.9
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 6.6e-12 77.0 140 32.9
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 8.6e-12 76.6 673 27.2
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 3.3e-11 74.7 239 25.5
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 7.3e-11 73.6 733 29.3
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 1.2e-10 72.8 134 32.8
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.2e-10 72.8 673 30.2
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 2.1e-10 72.0 251 26.3
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.1e-10 72.0 673 28.5
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 3.6e-10 71.2 279 25.4
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 3.6e-10 71.2 332 26.5
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 4.7e-10 70.9 678 27.9
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 4.7e-10 70.9 687 29.1
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 4.7e-10 70.9 143 32.9
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 8.1e-10 70.1 231 23.8
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 1.4e-09 69.3 640 31.6
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 2.4e-09 68.6 132 35.6
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 3.1e-09 68.2 360 26.1
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.1e-09 68.2 673 29.6
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 3.1e-09 68.2 683 22.3
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 4.0e-09 67.8 224 26.8
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 6.8e-09 67.0 673 29.6
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 1.2e-08 66.2 268 26.9
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 2.0e-08 65.5 281 24.6
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 4.4e-08 64.3 381 21.3
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 7.6e-08 63.5 124 36.3
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 9.9e-08 63.2 673 25.4
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 2.9e-07 61.6 711 23.2
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 4.9e-07 60.8 115 33.9
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 6.4e-07 60.5 331 28.4
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 1.1e-06 59.7 133 34.6
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 1.9e-06 58.9 684 27.5
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 3.2e-06 58.2 688 23.7
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 3.2e-06 58.2 688 23.7
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 3.2e-06 58.2 253 28.9
HPP92_027338 Vanilla planifolia HOM05D041139 ORTHO05D037827 4.2e-06 57.8 147 34.0


User provided reference genes

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