Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03142 Aquilegia oxysepala HOM05D002988 ORTHO05D078881 7.5e-94 347.4 209 100.0
Aqoxy2G03099 Aquilegia oxysepala HOM05D002988 ORTHO05D077724 3.5e-75 285.4 209 80.9
Aqoxy2G03143 Aquilegia oxysepala HOM05D002988 ORTHO05D078453 4.8e-16 89.0 86 58.1
Aqoxy2G02232 Aquilegia oxysepala HOM05D002988 ORTHO05D003479 6.1e-11 72.0 98 49.0
TAR623G1658 Trochodendron aralioides HOM05D002988 ORTHO05D003479 7.4e-09 65.1 73 53.4
CDE08G0151 Ceratophyllum demersum HOM05D002988 ORTHO05D003479 1.6e-08 63.9 90 38.9
Lj2C229T12 Lonicera japonica HOM05D002988 ORTHO05D003479 1.6e-08 63.9 70 47.1
CDE02G4409 Ceratophyllum demersum HOM05D002988 ORTHO05D003479 2.2e-08 63.5 93 37.6
Dinv25275 Davidia involucrata HOM05D002988 ORTHO05D003479 2.2e-08 63.5 74 54.1
Nn2g11139 Nelumbo nucifera HOM05D002988 ORTHO05D003479 2.2e-08 63.5 72 48.6
Lj8C321T9 Lonicera japonica HOM05D002988 ORTHO05D003479 2.8e-08 63.2 110 39.1
Sed0019870 Sechium edule HOM05D002988 ORTHO05D003479 3.7e-08 62.8 87 49.4
TAR369G1079 Trochodendron aralioides HOM05D002988 ORTHO05D003479 4.8e-08 62.4 73 53.4
Prupe.5G026700 Prunus persica HOM05D002988 ORTHO05D003479 6.3e-08 62.0 70 47.1
Cfa012530 Carpinus fangiana HOM05D002988 ORTHO05D003479 8.2e-08 61.6 98 40.8
Cfa012531 Carpinus fangiana HOM05D002988 ORTHO05D003479 8.2e-08 61.6 98 40.8
MBI05_g28380_MAGBIO Magnolia biondii HOM05D002988 ORTHO05D003479 8.2e-08 61.6 72 47.2
MSTRG.11903 Avicennia marina HOM05D002988 ORTHO05D003479 1.1e-07 61.2 86 43.0
Lj8C320T14 Lonicera japonica HOM05D002988 ORTHO05D003479 1.4e-07 60.8 80 45.0
Peaxi162Scf00185g01120 Petunia axillaris HOM05D002988 ORTHO05D003479 1.4e-07 60.8 88 48.9
Sed0002043 Sechium edule HOM05D002988 ORTHO05D003479 1.4e-07 60.8 86 46.5
vmacro00266 Vaccinium macrocarpon HOM05D002988 ORTHO05D003479 1.4e-07 60.8 72 47.2
GSVIVG01011111001 Vitis vinifera HOM05D002988 ORTHO05D003479 1.4e-07 60.8 72 45.8
Hma1.2p1_1645F.1_g295370 Hydrangea macrophylla HOM05D002988 ORTHO05D003479 2.4e-07 60.1 72 44.4
ClCG09G011590 Citrullus lanatus HOM05D002988 ORTHO05D003479 3.1e-07 59.7 57 59.6
Cc08_g03550 Coffea canephora HOM05D002988 ORTHO05D003479 3.1e-07 59.7 89 47.2
Oeu017089.1 Olea europaea HOM05D002988 ORTHO05D003479 3.1e-07 59.7 102 40.2
Rhsim11G0032300 Rhododendron simsii HOM05D002988 ORTHO05D003479 4.1e-07 59.3 54 51.9
MELO3C003444.2 Cucumis melo HOM05D002988 ORTHO05D003479 5.3e-07 58.9 87 46.0
CsaV3_3G048800 Cucumis sativus L. HOM05D002988 ORTHO05D003479 5.3e-07 58.9 87 46.0
Medtr5g028030 Medicago truncatula HOM05D002988 ORTHO05D003479 5.3e-07 58.9 72 47.2
SalBow8G3553 Salvia bowleyana HOM05D002988 ORTHO05D003479 5.3e-07 58.9 115 36.5
TWI81G0561 Tripterygium wilfordii HOM05D002988 ORTHO05D003479 6.9e-07 58.5 72 50.0
MSTRG.13895 Avicennia marina HOM05D002988 ORTHO05D003479 9.0e-07 58.2 116 35.3
EL10Ac9g22922 Beta vulgaris HOM05D002988 ORTHO05D003479 9.0e-07 58.2 88 42.0
CiPaw.11G099100 Carya illinoinensis HOM05D002988 ORTHO05D003479 9.0e-07 58.2 70 45.7
Nn2g13373 Nelumbo nucifera HOM05D002988 ORTHO05D003479 9.0e-07 58.2 73 50.7
Psat2g139520 Pisum sativum HOM05D002988 ORTHO05D003479 9.0e-07 58.2 72 47.2
SEGI_37231 Sequoiadendron giganteum HOM05D002988 ORTHO05D003479 9.0e-07 58.2 54 51.9
arahy.Tifrunner.gnm1.ann1.79TK8E Arachis hypogaea HOM05D002988 ORTHO05D003479 1.2e-06 57.8 80 43.8
arahy.Tifrunner.gnm1.ann1.VSYF54 Arachis hypogaea HOM05D002988 ORTHO05D003479 1.2e-06 57.8 80 43.8
Lj2g0027923 Lotus japonicus HOM05D002988 ORTHO05D003479 1.2e-06 57.8 86 44.2
Sabra01G0105100 Salix brachista HOM05D002988 ORTHO05D003479 1.2e-06 57.8 74 43.2
arahy.Tifrunner.gnm1.ann1.4RS22V Arachis hypogaea HOM05D002988 ORTHO05D003479 1.5e-06 57.4 80 43.8
CSS0006732 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 1.5e-06 57.4 73 50.7
Eucgr.L02550 Eucalyptus grandis HOM05D002988 ORTHO05D003479 1.5e-06 57.4 70 44.3
VMungo1215G2616 Vigna mungo HOM05D002988 ORTHO05D003479 1.5e-06 57.4 71 46.5
Glyma.01G012500 Glycine max HOM05D002988 ORTHO05D003479 2.0e-06 57.0 72 47.2
Glyma.09G209100 Glycine max HOM05D002988 ORTHO05D003479 2.0e-06 57.0 72 47.2
MD06G1038400 Malus domestica HOM05D002988 ORTHO05D003479 2.0e-06 57.0 71 50.7
Phvul.009G172500 Phaseolus vulgaris HOM05D002988 ORTHO05D003479 2.0e-06 57.0 69 43.5
ECA246G1645 Erigeron canadensis HOM05D002988 ORTHO05D003479 2.6e-06 56.6 86 41.9
Lj2g0001165 Lotus japonicus HOM05D002988 ORTHO05D003479 2.6e-06 56.6 86 44.2
Manes.15G170300 Manihot esculenta HOM05D002988 ORTHO05D003479 2.6e-06 56.6 75 42.7
Phvul.002G135200 Phaseolus vulgaris HOM05D002988 ORTHO05D003479 2.6e-06 56.6 73 46.6
arahy.Tifrunner.gnm1.ann1.TE4407 Arachis hypogaea HOM05D002988 ORTHO05D003479 3.4e-06 56.2 80 43.8
Migut.E01320 Erythranthe guttata HOM05D002988 ORTHO05D003479 3.4e-06 56.2 85 45.9
Ca_25164_v3 Cicer arietinum L. HOM05D002988 ORTHO05D003479 4.5e-06 55.8 72 47.2
MD16G1270500 Malus domestica HOM05D002988 ORTHO05D003479 4.5e-06 55.8 71 49.3
arahy.Tifrunner.gnm1.ann1.JV6Y4C Arachis hypogaea HOM05D002988 ORTHO05D003479 5.9e-06 55.5 80 43.8
CSS0041130 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 5.9e-06 55.5 70 44.3
Potri.003G097700 Populus trichocarpa HOM05D002988 ORTHO05D003479 5.9e-06 55.5 76 44.7
CANSAT21G0553 Cannabis sativa HOM05D002988 ORTHO05D003479 7.7e-06 55.1 70 41.4
CAN.G474.23 Capsicum annuum HOM05D002988 ORTHO05D003479 7.7e-06 55.1 82 45.1
HanXRQChr06g0172711 Helianthus annuus HOM05D002988 ORTHO05D003479 7.7e-06 55.1 87 44.8
TPR.G19450 Trifolium pratense HOM05D002988 ORTHO05D003479 7.7e-06 55.1 86 41.9
TWI60G0749 Tripterygium wilfordii HOM05D002988 ORTHO05D003479 7.7e-06 55.1 72 47.2
Ah.01g012950 Amaranthus hybridus HOM05D002988 ORTHO05D003479 1.0e-05 54.7 94 39.4
arahy.Tifrunner.gnm1.ann1.A128ZG Arachis hypogaea HOM05D002988 ORTHO05D003479 1.0e-05 54.7 80 42.5
Nitab4.5_0001632g0050 Nicotiana tabacum HOM05D002988 ORTHO05D003479 1.0e-05 54.7 82 45.1
SGA_v2.0_scaffold96G29042 Striga asiatica HOM05D002988 ORTHO05D003479 1.0e-05 54.7 83 33.7
HPP92_019444 Vanilla planifolia HOM05D002988 ORTHO05D003479 1.0e-05 54.7 74 48.6


User provided reference genes

Program Settings