Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03119 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 1.9e-202 709.1 401 100.0
Aqoxy1G03853 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 4.1e-32 143.3 279 36.9
Aqoxy4G02486 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 4.5e-31 139.8 288 38.2
Aqoxy4G02484 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 1.8e-24 117.9 280 36.8
Aqoxy1G03849 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 8.3e-17 92.4 209 32.5
Aqoxy1G03845 Aquilegia oxysepala HOM05D002273 ORTHO05D015323 4.1e-16 90.1 186 38.7
Aqoxy1G04001 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 1.6e-15 88.2 149 37.6
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 3.5e-15 87.0 241 30.3
TAR371G0597 Trochodendron aralioides HOM05D002273 ORTHO05D000818 3.5e-15 87.0 273 28.6
HanXRQChr07g0207061 Helianthus annuus HOM05D002077 ORTHO05D000818 2.3e-14 84.3 241 30.3
HPP92_019492 Vanilla planifolia HOM05D002273 ORTHO05D000818 8.6e-14 82.4 288 26.0
HanXRQChr15g0495591 Helianthus annuus HOM05D002077 ORTHO05D000818 4.3e-13 80.1 245 29.8
DCAR_009358 Daucus carota HOM05D002077 ORTHO05D000818 5.6e-13 79.7 240 27.9
HPP92_018671 Vanilla planifolia HOM05D002273 ORTHO05D000818 5.6e-13 79.7 238 28.6
HPP92_018689 Vanilla planifolia HOM05D002273 ORTHO05D000818 1.6e-12 78.2 240 28.3
Prupe.1G158000 Prunus persica HOM05D002273 ORTHO05D000818 2.8e-12 77.4 281 26.7
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 2.8e-12 77.4 239 29.3
Cpa.g.sc107.40 Carica papaya HOM05D002077 ORTHO05D000818 3.6e-12 77.0 240 26.7
Lalb_Chr06g0161071 Lupinus albus HOM05D002077 ORTHO05D000818 4.7e-12 76.6 242 27.7
VMungo0720G0161 Vigna mungo HOM05D002077 ORTHO05D000818 4.7e-12 76.6 242 28.5
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 8.0e-12 75.9 241 28.2
Eucgr.A02798 Eucalyptus grandis HOM05D002077 ORTHO05D000818 1.4e-11 75.1 239 27.6
Hma1.2p1_3140F.1_g333050 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 1.4e-11 75.1 238 27.7
Ciclev10005501m.g Citrus clementina HOM05D002077 ORTHO05D000818 2.3e-11 74.3 241 27.8
Cfa008309 Carpinus fangiana HOM05D002077 ORTHO05D000818 3.1e-11 73.9 240 28.3
Phvul.007G069000 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 3.1e-11 73.9 242 28.1
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 5.2e-11 73.2 237 27.8
Haze_13726 Corylus avellana HOM05D002077 ORTHO05D000818 5.2e-11 73.2 241 27.8
Dinv28453 Davidia involucrata HOM05D002077 ORTHO05D000818 5.2e-11 73.2 238 27.3
Oeu045095.1 Olea europaea HOM05D014036 ORTHO05D015323 6.8e-11 72.8 279 27.6
QL09p014520 Quercus lobata HOM05D002077 ORTHO05D000818 6.8e-11 72.8 238 26.9
HPP92_018673 Vanilla planifolia HOM05D002273 ORTHO05D000818 6.8e-11 72.8 244 29.5
MBI18_g28203_MAGBIO Magnolia biondii HOM05D002273 ORTHO05D000818 1.2e-10 72.0 232 27.2
Actinidia34102 Actinidia chinensis HOM05D002077 ORTHO05D000818 1.5e-10 71.6 240 28.3
CAN.G913.3 Capsicum annuum HOM05D002077 ORTHO05D000818 1.5e-10 71.6 243 28.4
Lj5g0027705 Lotus japonicus HOM05D002077 ORTHO05D000818 1.5e-10 71.6 242 28.1
QL08p007653 Quercus lobata HOM05D002273 ORTHO05D000818 1.5e-10 71.6 242 28.1
Rhsim03G0179600 Rhododendron simsii HOM05D002077 ORTHO05D000818 1.5e-10 71.6 240 27.1
HPP92_012377 Vanilla planifolia HOM05D002077 ORTHO05D000818 1.5e-10 71.6 262 25.6
HPP92_013985 Vanilla planifolia HOM05D002273 ORTHO05D000818 1.5e-10 71.6 237 25.3
Aqoxy3G02725 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 2.0e-10 71.2 239 29.7
Prupe.2G293200 Prunus persica HOM05D002077 ORTHO05D000818 2.0e-10 71.2 243 26.7
Sabra16G0021500 Salix brachista HOM05D002273 ORTHO05D000818 2.0e-10 71.2 279 26.2
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 2.6e-10 70.9 237 28.3
TWI14G1216 Tripterygium wilfordii HOM05D002077 ORTHO05D000818 2.6e-10 70.9 238 27.3
TAR636G1697 Trochodendron aralioides HOM05D002077 ORTHO05D000818 2.6e-10 70.9 241 29.9
Aqoxy1G02128 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 3.4e-10 70.5 275 27.6
Lj8A25T67 Lonicera japonica HOM05D002077 ORTHO05D000818 3.4e-10 70.5 241 26.1
MD01G1199600 Malus domestica HOM05D002077 ORTHO05D000818 3.4e-10 70.5 244 26.2
Ca_00521_v3 Cicer arietinum L. HOM05D000710 ORTHO05D000336 4.4e-10 70.1 294 27.6
Peaxi162Scf00915g00025 Petunia axillaris HOM05D002077 ORTHO05D000818 4.4e-10 70.1 242 27.7
A09p02910 Brassica napus HOM05D000710 ORTHO05D000336 5.8e-10 69.7 265 24.5
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 5.8e-10 69.7 241 26.1
Hma1.2p1_0383F.1_g140340 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 5.8e-10 69.7 267 27.7
vmacro15545 Vaccinium macrocarpon HOM05D002273 ORTHO05D000818 5.8e-10 69.7 240 26.7
Ah.09g232420 Amaranthus hybridus HOM05D000710 ORTHO05D000336 7.5e-10 69.3 252 28.2
Dinv25029 Davidia involucrata HOM05D002273 ORTHO05D000818 7.5e-10 69.3 252 28.2
Glyma.10G236900 Glycine max HOM05D002077 ORTHO05D000818 7.5e-10 69.3 237 27.4
Os10g0502900 Oryza sativa ssp. japonica HOM05D002077 ORTHO05D000818 9.8e-10 68.9 273 27.1
Phvul.006G166900 Phaseolus vulgaris HOM05D000710 ORTHO05D000336 9.8e-10 68.9 289 25.6
GSVIVG01010544001 Vitis vinifera HOM05D002077 ORTHO05D000818 9.8e-10 68.9 241 26.1
Glyma.20G157500 Glycine max HOM05D002077 ORTHO05D000818 1.3e-09 68.6 237 27.4
Lsat_1_v5_gn_2_131821 Lactuca sativa HOM05D002077 ORTHO05D000818 1.3e-09 68.6 237 26.6
Lj6A542G10 Lonicera japonica HOM05D002273 ORTHO05D000818 1.3e-09 68.6 257 26.8
Solyc03g025920.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 1.3e-09 68.6 243 27.2
Sopen03g004730 Solanum pennellii HOM05D002077 ORTHO05D000818 1.3e-09 68.6 243 27.2
PGSC0003DMG403014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.3e-09 68.6 243 27.2
GSVIVG01022452001 Vitis vinifera HOM05D002273 ORTHO05D000818 1.3e-09 68.6 246 28.9
Aqoxy4G02851 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 2.2e-09 67.8 269 26.4
RcHm_v2.0_Chr4g0414691 Rosa chinensis HOM05D002273 ORTHO05D000818 2.2e-09 67.8 305 26.6
QL12p002854 Quercus lobata HOM05D002077 ORTHO05D000818 2.9e-09 67.4 239 29.3
TPR.G26232 Trifolium pratense HOM05D000710 ORTHO05D000336 2.9e-09 67.4 245 28.2
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea HOM05D002077 ORTHO05D000818 3.7e-09 67.0 237 27.8
FvH4_4g13861 Fragaria vesca HOM05D002273 ORTHO05D000818 3.7e-09 67.0 261 24.5
Psat1g191840 Pisum sativum HOM05D000710 ORTHO05D000336 3.7e-09 67.0 314 26.1
Solyc03g025930.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 3.7e-09 67.0 243 26.3
ECA240G2032 Erigeron canadensis HOM05D000710 ORTHO05D000336 4.9e-09 66.6 281 23.8
Glyma.13G220200 Glycine max HOM05D000710 ORTHO05D000336 4.9e-09 66.6 290 26.9
Hma1.2p1_0383F.1_g140320 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 4.9e-09 66.6 286 26.9
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 4.9e-09 66.6 242 27.3
RcHm_v2.0_Chr4g0414631 Rosa chinensis HOM05D002273 ORTHO05D000818 4.9e-09 66.6 278 26.3
vmacro06694 Vaccinium macrocarpon HOM05D002077 ORTHO05D000818 4.9e-09 66.6 237 26.6
HPP92_018691 Vanilla planifolia HOM05D002273 ORTHO05D000818 4.9e-09 66.6 244 28.7
RcHm_v2.0_Chr4g0414641 Rosa chinensis HOM05D002273 ORTHO05D000818 6.4e-09 66.2 270 25.6
Hund21557 Selenicereus undatus HOM05D000710 ORTHO05D000336 6.4e-09 66.2 273 23.8
HPP92_008435 Vanilla planifolia HOM05D002077 ORTHO05D000818 6.4e-09 66.2 238 26.1
HPP92_015686 Vanilla planifolia HOM05D002273 ORTHO05D000818 6.4e-09 66.2 280 25.0
Aqoxy6G01809 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 8.3e-09 65.9 241 25.3
ECA238G3926 Erigeron canadensis HOM05D002077 ORTHO05D000818 8.3e-09 65.9 241 27.0
RcHm_v2.0_Chr5g0013061 Rosa chinensis HOM05D002273 ORTHO05D000818 8.3e-09 65.9 276 26.1
HPP92_008461 Vanilla planifolia HOM05D002077 ORTHO05D000818 8.3e-09 65.9 238 26.1
Aqoxy6G01812 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 1.1e-08 65.5 281 24.2
Dinv27227 Davidia involucrata HOM05D002273 ORTHO05D000818 1.1e-08 65.5 245 27.8
Eucgr.A02799 Eucalyptus grandis HOM05D002077 ORTHO05D000818 1.4e-08 65.1 239 25.1
Prupe.1G158200 Prunus persica HOM05D002273 ORTHO05D000818 1.4e-08 65.1 257 26.1
PGSC0003DMG402014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.4e-08 65.1 243 26.7
Thecc.03G175300 Theobroma cacao HOM05D002077 ORTHO05D000818 1.4e-08 65.1 237 25.7
TPR.G14327 Trifolium pratense HOM05D002077 ORTHO05D000818 1.4e-08 65.1 237 27.8
Aqoxy7G02866 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 1.9e-08 64.7 248 27.4
MBI10_g26040_MAGBIO Magnolia biondii HOM05D010175 ORTHO05D012300 1.9e-08 64.7 270 27.4
Psat2g062520 Pisum sativum HOM05D000710 ORTHO05D000336 1.9e-08 64.7 243 26.7
SalBow2G3420 Salvia bowleyana HOM05D002077 ORTHO05D000818 1.9e-08 64.7 237 26.6
arahy.Tifrunner.gnm1.ann1.6F3H4Y Arachis hypogaea HOM05D000710 ORTHO05D000336 2.4e-08 64.3 251 26.3
CiPaw.03G105400 Carya illinoinensis HOM05D002077 ORTHO05D000818 2.4e-08 64.3 206 28.2
Atru.chr10.1017 Acer truncatum HOM05D000710 ORTHO05D000336 3.2e-08 63.9 288 26.7
Atru.chr10.1026 Acer truncatum HOM05D000710 ORTHO05D000336 3.2e-08 63.9 288 26.7
Actinidia02878 Actinidia chinensis HOM05D002273 ORTHO05D000818 3.2e-08 63.9 246 28.0
FvH4_4g13850 Fragaria vesca HOM05D002273 ORTHO05D000818 3.2e-08 63.9 231 27.7
RcHm_v2.0_Chr1g0377091 Rosa chinensis HOM05D002077 ORTHO05D000818 3.2e-08 63.9 248 26.6
arahy.Tifrunner.gnm1.ann1.0XWW4R Arachis hypogaea HOM05D000710 ORTHO05D000336 4.1e-08 63.5 261 25.3
BcaC04g23989 Brassica carinata HOM05D000710 ORTHO05D000336 4.1e-08 63.5 282 24.8
FvH4_7g29340 Fragaria vesca HOM05D002077 ORTHO05D000818 4.1e-08 63.5 248 25.8
Lj6g0017136 Lotus japonicus HOM05D000710 ORTHO05D000336 4.1e-08 63.5 291 24.7
Medtr2g018910 Medicago truncatula HOM05D000710 ORTHO05D000336 4.1e-08 63.5 245 27.3
Medtr2g018940 Medicago truncatula HOM05D000710 ORTHO05D000336 4.1e-08 63.5 277 28.5
Medtr3g080360 Medicago truncatula HOM05D000710 ORTHO05D000336 4.1e-08 63.5 276 24.3
arahy.Tifrunner.gnm1.ann1.T21N8D Arachis hypogaea HOM05D000710 ORTHO05D000336 5.4e-08 63.2 293 25.6
CANSAT11G2519 Cannabis sativa HOM05D000710 ORTHO05D000336 5.4e-08 63.2 289 23.9
Nn1g06062 Nelumbo nucifera HOM05D002273 ORTHO05D000818 5.4e-08 63.2 249 23.3
GSVIVG01031558001 Vitis vinifera HOM05D002273 ORTHO05D000818 5.4e-08 63.2 158 31.6
Cfa000865 Carpinus fangiana HOM05D000710 ORTHO05D000336 7.0e-08 62.8 276 26.1
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 7.0e-08 62.8 247 25.5
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 7.0e-08 62.8 237 27.0
TPR.G26241 Trifolium pratense HOM05D000710 ORTHO05D000336 7.0e-08 62.8 249 26.9
Zm00001eb354560 Zea mays HOM05D000710 ORTHO05D000336 7.0e-08 62.8 289 24.6
CSS0042417 Camellia sinensis var. sinensis HOM05D000710 ORTHO05D000336 9.2e-08 62.4 247 27.5
CSS0043964 Camellia sinensis var. sinensis HOM05D000710 ORTHO05D000336 9.2e-08 62.4 247 27.5
BcaB05g24630 Brassica carinata HOM05D000710 ORTHO05D000336 1.2e-07 62.0 273 25.3
Sed0007111 Sechium edule HOM05D000710 ORTHO05D000336 1.2e-07 62.0 263 25.5
Actinidia27496 Actinidia chinensis HOM05D002273 ORTHO05D000818 1.6e-07 61.6 246 27.6
Ah.09g232430 Amaranthus hybridus HOM05D000710 ORTHO05D000336 1.6e-07 61.6 250 27.2
Lj6A540T15 Lonicera japonica HOM05D002273 ORTHO05D000818 1.6e-07 61.6 270 25.2
HPP92_017711 Vanilla planifolia HOM05D004088 ORTHO05D004736 1.6e-07 61.6 241 25.7
BcaB01g01970 Brassica carinata HOM05D000710 ORTHO05D000336 2.0e-07 61.2 247 25.5
CDE02G0027 Ceratophyllum demersum HOM05D000710 ORTHO05D000336 2.0e-07 61.2 279 24.7
FvH4_3g06260 Fragaria vesca HOM05D002273 ORTHO05D000818 2.7e-07 60.8 272 25.4
PSO541G4900 Papaver somniferum HOM05D000710 ORTHO05D000336 2.7e-07 60.8 295 25.1
EL10Ac8g19609 Beta vulgaris HOM05D000710 ORTHO05D000336 3.5e-07 60.5 289 24.2
Medtr5g036740 Medicago truncatula HOM05D000710 ORTHO05D000336 3.5e-07 60.5 282 26.2
GSVIVG01021579001 Vitis vinifera HOM05D000710 ORTHO05D000336 3.5e-07 60.5 293 25.3
AUR62030116 Chenopodium quinoa HOM05D000710 ORTHO05D000336 4.6e-07 60.1 274 25.9
FAN03G0915 Fragaria x ananassa HOM05D002077 ORTHO05D000818 4.6e-07 60.1 247 25.1
Lj6A536G23 Lonicera japonica HOM05D002273 ORTHO05D000818 4.6e-07 60.1 272 25.4
Hund21558 Selenicereus undatus HOM05D000710 ORTHO05D000336 4.6e-07 60.1 277 24.2
GSVIVG01006146001 Vitis vinifera HOM05D002273 ORTHO05D000818 4.6e-07 60.1 253 27.7
GSVIVG01037125001 Vitis vinifera HOM05D000012 ORTHO05D003625 4.6e-07 60.1 252 27.4
BolC9t53229H Brassica oleracea HOM05D000710 ORTHO05D000336 6.0e-07 59.7 259 24.3
BraA03t12215Z Brassica rapa HOM05D000710 ORTHO05D000336 6.0e-07 59.7 301 23.3
Thhalv10015508m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 6.0e-07 59.7 250 24.0
BcaC04g23947 Brassica carinata HOM05D000710 ORTHO05D000336 7.8e-07 59.3 258 23.6
FAN10G4305 Fragaria x ananassa HOM05D002077 ORTHO05D000818 7.8e-07 59.3 248 25.4
PGR031G0889 Punica granatum HOM05D000710 ORTHO05D000336 7.8e-07 59.3 251 23.9
Atru.chr10.1019 Acer truncatum HOM05D000710 ORTHO05D000336 1.0e-06 58.9 267 26.6
Atru.chr10.1028 Acer truncatum HOM05D000710 ORTHO05D000336 1.0e-06 58.9 267 26.6
Lj3P407T43 Lonicera japonica HOM05D002273 ORTHO05D000818 1.0e-06 58.9 238 28.2
Medtr8g006980 Medicago truncatula HOM05D000710 ORTHO05D000336 1.0e-06 58.9 284 24.3
Nn6g31932 Nelumbo nucifera HOM05D000710 ORTHO05D000336 1.0e-06 58.9 291 25.4
Lalb_Chr12g0204161 Lupinus albus HOM05D000710 ORTHO05D000336 1.3e-06 58.5 278 26.3
Medtr8g091730 Medicago truncatula HOM05D000710 ORTHO05D000336 1.3e-06 58.5 242 25.2
PSO675G8022 Papaver somniferum HOM05D000710 ORTHO05D000336 1.3e-06 58.5 295 24.7
Lalb_Chr12g0204171 Lupinus albus HOM05D000710 ORTHO05D000336 1.7e-06 58.2 288 27.1
Lalb_Chr25g0280401 Lupinus albus HOM05D000710 ORTHO05D000336 1.7e-06 58.2 247 25.9
GSVIVG01022448001 Vitis vinifera HOM05D002273 ORTHO05D000818 1.7e-06 58.2 245 27.3
RcHm_v2.0_Chr1g0377061 Rosa chinensis HOM05D002077 ORTHO05D000818 2.3e-06 57.8 246 26.0
CSS0000286 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 3.0e-06 57.4 245 24.1
Thhalv10005418m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 3.0e-06 57.4 248 23.4
BcaB01g02545 Brassica carinata HOM05D000710 ORTHO05D000336 3.9e-06 57.0 242 25.2
Os03g0562200 Oryza sativa ssp. japonica HOM05D024174 ORTHO05D000818 3.9e-06 57.0 266 23.7
A09p02890 Brassica napus HOM05D000710 ORTHO05D000336 5.0e-06 56.6 250 24.4
BraA09t35936Z Brassica rapa HOM05D000710 ORTHO05D000336 5.0e-06 56.6 266 23.3
Lsat_1_v5_gn_7_32521 Lactuca sativa HOM05D000710 ORTHO05D000336 5.0e-06 56.6 264 21.6
Lj6A539T24 Lonicera japonica HOM05D002273 ORTHO05D000818 5.0e-06 56.6 272 25.0
BraA09t35935Z Brassica rapa HOM05D000710 ORTHO05D000336 6.6e-06 56.2 246 24.0
Thhalv10028845m.g Eutrema salsugineum HOM05D000710 ORTHO05D000336 6.6e-06 56.2 268 23.5
FAN03G1381 Fragaria x ananassa HOM05D002077 ORTHO05D000818 6.6e-06 56.2 247 27.5
Psat5g121640 Pisum sativum HOM05D000710 ORTHO05D000336 6.6e-06 56.2 247 25.9
Aa31LG11G3080 Aethionema arabicum HOM05D002077 ORTHO05D000818 8.6e-06 55.8 239 26.4
Glyma.15G092200 Glycine max HOM05D000710 ORTHO05D000336 8.6e-06 55.8 248 25.4
Medtr1g100713 Medicago truncatula HOM05D002077 ORTHO05D000818 8.6e-06 55.8 241 26.1
Sc16g0000170 Simmondsia chinensis HOM05D002325 ORTHO05D000336 8.6e-06 55.8 264 24.6


User provided reference genes

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