Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 1.3e-219 766.1 392 100.0
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 3.4e-140 502.3 283 81.6
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 7.1e-138 494.6 283 82.0
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 2.3e-136 489.6 283 81.3
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 4.3e-135 485.3 283 78.8
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 8.1e-134 481.1 279 79.9
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 4.0e-133 478.8 281 80.1
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 9.0e-133 477.6 363 65.0
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 9.0e-133 477.6 283 78.1
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 9.0e-133 477.6 278 77.7
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 2.6e-132 476.1 278 77.0
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 3.4e-132 475.7 281 78.3
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 5.8e-132 474.9 287 76.7
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 9.9e-132 474.2 312 73.1
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 3.8e-131 472.2 294 75.5
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 4.9e-131 471.9 281 78.6
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 8.4e-131 471.1 284 75.0
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.1e-130 470.7 279 77.8
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.1e-130 470.7 279 76.7
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 1.4e-130 470.3 280 76.1
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 2.4e-130 469.5 272 78.7
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 3.2e-130 469.2 336 67.0
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 3.2e-130 469.2 296 74.7
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 4.2e-130 468.8 282 77.3
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 4.2e-130 468.8 272 78.3
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 2.1e-129 466.5 272 78.3
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 2.1e-129 466.5 284 75.7
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 3.5e-129 465.7 278 75.9
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 4.6e-129 465.3 283 76.7
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 1.0e-128 464.2 273 77.3
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 1.0e-128 464.2 378 62.7
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 1.3e-128 463.8 280 77.5
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 6.7e-128 461.5 283 74.6
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 6.7e-128 461.5 283 74.6
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 1.1e-127 460.7 278 75.2
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 4.3e-127 458.8 283 74.2
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 1.3e-126 457.2 330 69.7
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 1.3e-126 457.2 282 75.5
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 3.6e-126 455.7 293 74.7
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 6.2e-126 454.9 284 74.3
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 1.1e-125 454.1 278 75.9
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 1.4e-125 453.8 275 76.7
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 5.3e-125 451.8 280 76.1
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 9.0e-125 451.1 275 75.6
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 1.3e-123 447.2 283 74.2
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 2.2e-123 446.4 273 77.7
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 2.2e-123 446.4 272 73.2
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 2.9e-123 446.0 275 74.9
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 3.8e-123 445.7 283 73.1
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 8.4e-123 444.5 336 64.6
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 6.0e-121 438.3 358 62.3
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 6.0e-121 438.3 262 76.3
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 7.9e-121 438.0 275 73.8
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 7.9e-121 438.0 345 63.8
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 1.8e-120 436.8 282 73.0
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 3.9e-120 435.6 282 72.0
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 6.7e-120 434.9 296 69.6
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 1.5e-119 433.7 286 72.4
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 1.9e-119 433.3 263 74.9
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 3.3e-119 432.6 325 64.6
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 5.6e-119 431.8 280 70.7
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 7.4e-119 431.4 297 69.7
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 7.4e-119 431.4 267 74.2
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 1.3e-118 430.6 335 65.1
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 1.6e-118 430.3 256 78.9
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 2.1e-118 429.9 276 71.7
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 2.8e-118 429.5 274 73.4
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 4.8e-118 428.7 272 72.4
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 4.8e-118 428.7 383 59.5
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 6.2e-118 428.3 278 71.9
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 6.2e-118 428.3 279 72.0
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 1.4e-117 427.2 276 71.4
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.4e-117 427.2 269 74.3
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 1.4e-117 427.2 260 75.4
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 2.4e-117 426.4 260 75.0
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 3.1e-117 426.0 262 74.0
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 6.9e-117 424.9 270 74.1
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 6.9e-117 424.9 267 73.0
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 9.0e-117 424.5 267 73.4
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 9.0e-117 424.5 258 74.8
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 2.6e-116 422.9 274 72.3
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 7.6e-116 421.4 277 71.1
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 1.7e-115 420.2 277 69.7
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 2.9e-115 419.5 283 70.7
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 2.9e-115 419.5 263 74.5
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 6.5e-115 418.3 343 60.9
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 8.4e-115 417.9 288 69.1
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 1.1e-114 417.5 280 69.3
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 1.9e-114 416.8 313 66.1
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 5.5e-114 415.2 373 57.6
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 9.3e-114 414.5 297 67.0
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 1.0e-112 411.0 282 70.2
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 1.3e-112 410.6 283 68.6
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 1.3e-112 410.6 274 69.3
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 2.3e-112 409.8 283 68.6
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 8.7e-112 407.9 264 70.8
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 1.1e-111 407.5 274 70.1
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 1.5e-111 407.1 259 73.4
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 2.5e-111 406.4 262 72.5
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 4.3e-111 405.6 232 80.6
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 7.4e-111 404.8 286 68.2
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 2.0e-108 396.7 230 80.0
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 2.6e-108 396.4 288 66.3
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 3.4e-108 396.0 284 66.2
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 3.8e-107 392.5 271 70.1
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 5.0e-107 392.1 276 67.0
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 3.2e-106 389.4 280 66.1
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 3.6e-105 386.0 324 61.1
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.3e-104 384.0 337 57.0
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 2.3e-104 383.3 275 68.4
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 6.7e-104 381.7 337 56.7
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 1.1e-103 380.9 356 57.9
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 5.7e-103 378.6 269 66.5
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 3.2e-98 362.8 288 61.8
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 3.6e-97 359.4 266 66.2
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 1.8e-96 357.1 238 71.4
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 2.3e-96 356.7 279 63.8
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 1.5e-92 344.0 277 59.2
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 1.5e-92 344.0 258 60.1
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 4.5e-92 342.4 274 55.1
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 8.5e-91 338.2 253 65.2
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 4.2e-90 335.9 277 56.0
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 1.8e-88 330.5 348 51.1
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 8.8e-88 328.2 278 59.0
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 1.5e-87 327.4 187 81.3
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 1.5e-87 327.4 267 60.3
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.9e-82 310.5 275 56.7
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.2e-81 307.8 275 56.0
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 4.0e-80 302.8 300 52.0
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.2e-79 301.2 284 54.6
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 2.0e-79 300.4 300 51.7
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 3.3e-79 299.7 244 62.7
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 1.3e-78 297.7 283 54.8
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 4.8e-78 295.8 260 51.9
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 7.7e-76 288.5 273 53.8
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 7.2e-74 282.0 265 54.7
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 9.4e-74 281.6 261 49.8
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 3.0e-72 276.6 168 76.2
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 3.0e-72 276.6 220 64.5
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 5.7e-71 272.3 329 46.2
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 4.5e-68 262.7 187 70.1
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.9e-68 262.3 187 70.1
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 2.8e-65 253.4 176 69.3
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 4.7e-65 252.7 166 71.1
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 1.0e-64 251.5 168 69.6
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 2.0e-63 247.3 484 33.7
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 9.8e-63 245.0 160 70.6
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 3.7e-62 243.0 244 51.6
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 8.3e-62 241.9 150 74.7
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 8.3e-62 241.9 215 57.2
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.4e-61 241.1 160 69.4
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 1.4e-61 241.1 160 70.0
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 4.5e-60 236.1 167 66.5
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 2.8e-57 226.9 258 42.2
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 4.1e-53 213.0 270 43.0
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 2.1e-49 200.7 350 32.9
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 4.7e-49 199.5 119 76.5
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 2.6e-47 193.7 113 74.3
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 1.7e-46 191.0 136 67.6
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 6.0e-44 182.6 127 64.6
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.1e-42 178.3 125 64.0
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 2.5e-42 177.2 106 76.4
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 3.6e-41 173.3 111 72.1
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 3.6e-41 173.3 129 60.5
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 4.9e-38 162.9 106 71.7
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 6.0e-36 156.0 86 82.6
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 3.0e-35 153.7 186 47.8
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 8.6e-35 152.1 97 68.0
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.9e-34 151.0 96 68.8
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 2.8e-33 147.1 138 53.6
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 2.4e-29 134.0 90 64.4
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 5.6e-26 122.9 91 61.5
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 2.1e-20 104.4 60 75.0
SEGI_13555 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 3.0e-19 100.5 72 62.5
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 9.6e-18 95.5 56 76.8
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.4e-16 91.7 51 78.4
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 2.7e-12 77.4 51 70.6
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 2.8e-09 67.4 45 66.7
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 1.4e-08 65.1 43 67.4
Medtr8g027510 Medicago truncatula HOM05D003864 ORTHO05D004658 5.3e-08 63.2 39 79.5


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