Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03091 Aquilegia oxysepala HOM05D000042 ORTHO05D078376 2.2e-65 252.7 186 100.0
Aqoxy7G00494 Aquilegia oxysepala HOM05D000042 ORTHO05D000028 3.3e-16 89.4 121 50.4
Medtr7g075870 Medicago truncatula HOM05D000042 ORTHO05D000028 2.3e-09 66.6 112 42.9
Nn6g34316 Nelumbo nucifera HOM05D000042 ORTHO05D000028 3.0e-09 66.2 116 41.4
Medtr8g033220 Medicago truncatula HOM05D000042 ORTHO05D000028 8.6e-09 64.7 110 43.6
AUR62010573 Chenopodium quinoa HOM05D000042 ORTHO05D000028 1.5e-08 63.9 117 40.2
AUR62017316 Chenopodium quinoa HOM05D000042 ORTHO05D000028 1.5e-08 63.9 117 41.9
Potri.002G151700 Populus trichocarpa HOM05D000042 ORTHO05D000028 1.9e-08 63.5 110 40.0
TWI23G0478 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 1.9e-08 63.5 109 42.2
Gorai.007G093800 Gossypium raimondii HOM05D000042 ORTHO05D000028 2.5e-08 63.2 117 39.3
BcaB06g29433 Brassica carinata HOM05D000042 ORTHO05D000028 3.3e-08 62.8 117 40.2
Eucgr.A02846 Eucalyptus grandis HOM05D000042 ORTHO05D000028 3.3e-08 62.8 110 36.4
TWI59G1356 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 3.3e-08 62.8 109 43.1
GSVIVG01027579001 Vitis vinifera HOM05D000042 ORTHO05D000028 3.3e-08 62.8 117 40.2
AT5G51870 Arabidopsis thaliana HOM05D000042 ORTHO05D000028 4.3e-08 62.4 110 34.5
Psat0s657g0040 Pisum sativum HOM05D000042 ORTHO05D000028 4.3e-08 62.4 112 41.1
SGA_v2.0_scaffold95G28880 Striga asiatica HOM05D000042 ORTHO05D000028 5.6e-08 62.0 109 34.9
TPR.G37734 Trifolium pratense HOM05D000042 ORTHO05D000028 5.6e-08 62.0 114 39.5
Lj1g0021363 Lotus japonicus HOM05D000042 ORTHO05D000028 7.3e-08 61.6 112 40.2
Phvul.008G073800 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 7.3e-08 61.6 112 38.4
RcHm_v2.0_Chr1g0351691 Rosa chinensis HOM05D000042 ORTHO05D000028 7.3e-08 61.6 110 40.0
VMungo1383G1728 Vigna mungo HOM05D000042 ORTHO05D000028 7.3e-08 61.6 112 38.4
AL604U10010 Arabidopsis lyrata HOM05D000042 ORTHO05D000028 9.5e-08 61.2 110 35.5
AL8G26170 Arabidopsis lyrata HOM05D000042 ORTHO05D000028 9.5e-08 61.2 110 35.5
BcaC02g07078 Brassica carinata HOM05D000042 ORTHO05D000028 9.5e-08 61.2 117 35.9
C04p71750 Brassica napus HOM05D000042 ORTHO05D000028 9.5e-08 61.2 117 35.9
Ciclev10006217m.g Citrus clementina HOM05D000042 ORTHO05D000028 9.5e-08 61.2 110 39.1
THA.LOC104825084 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 9.5e-08 61.2 110 38.2
Atru.chr5.370 Acer truncatum HOM05D000042 ORTHO05D000028 1.2e-07 60.8 117 35.0
arahy.Tifrunner.gnm1.ann1.H2N64Y Arachis hypogaea HOM05D000042 ORTHO05D000028 1.2e-07 60.8 110 40.9
arahy.Tifrunner.gnm1.ann1.H916D0 Arachis hypogaea HOM05D000042 ORTHO05D000028 1.2e-07 60.8 110 40.9
A04p33940 Brassica napus HOM05D000042 ORTHO05D000028 1.2e-07 60.8 117 35.9
BraA04t18855Z Brassica rapa HOM05D000042 ORTHO05D000028 1.2e-07 60.8 117 35.9
Thhalv10015303m.g Eutrema salsugineum HOM05D000042 ORTHO05D000028 1.6e-07 60.5 110 38.2
arahy.Tifrunner.gnm1.ann1.P3T58Z Arachis hypogaea HOM05D000042 ORTHO05D000028 2.1e-07 60.1 112 40.2
BolC4t28674H Brassica oleracea HOM05D000042 ORTHO05D000028 2.1e-07 60.1 117 35.9
PSO478G4386 Papaver somniferum HOM05D000042 ORTHO05D000028 2.1e-07 60.1 115 43.5
Sabra14G0052900 Salix brachista HOM05D000042 ORTHO05D000028 2.1e-07 60.1 109 37.6
Atru.chr1.563 Acer truncatum HOM05D000042 ORTHO05D000028 2.8e-07 59.7 110 39.1
arahy.Tifrunner.gnm1.ann1.679QY2 Arachis hypogaea HOM05D000042 ORTHO05D000028 2.8e-07 59.7 114 39.5
Thecc.03G167100 Theobroma cacao HOM05D000042 ORTHO05D000028 2.8e-07 59.7 110 38.2
AUR62004274 Chenopodium quinoa HOM05D000042 ORTHO05D000028 3.6e-07 59.3 110 38.2
COL.COLO4_12653 Corchorus olitorius HOM05D000042 ORTHO05D000028 3.6e-07 59.3 113 38.1
Gohir.A12G102700 Gossypium hirsutum HOM05D000042 ORTHO05D000028 3.6e-07 59.3 118 37.3
Gorai.008G115200 Gossypium raimondii HOM05D000042 ORTHO05D000028 3.6e-07 59.3 118 38.1
MD07G1123600 Malus domestica HOM05D000042 ORTHO05D000028 3.6e-07 59.3 118 40.7
Carub.0008s1191 Capsella rubella HOM05D000042 ORTHO05D000028 4.7e-07 58.9 111 36.9
AUR62033383 Chenopodium quinoa HOM05D000042 ORTHO05D000028 4.7e-07 58.9 110 37.3
Duzib133G1416 Durio zibethinus HOM05D000042 ORTHO05D000028 4.7e-07 58.9 118 39.8
Lalb_Chr01g0021241 Lupinus albus HOM05D000042 ORTHO05D000028 4.7e-07 58.9 114 38.6
Manes.01G263500 Manihot esculenta HOM05D000042 ORTHO05D000028 4.7e-07 58.9 110 39.1
Peaxi162Scf00008g01620 Petunia axillaris HOM05D000042 ORTHO05D000028 4.7e-07 58.9 110 40.0
BcaB02g09020 Brassica carinata HOM05D000042 ORTHO05D000028 6.2e-07 58.5 110 33.6
CSS0049884 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 6.2e-07 58.5 109 39.4
Dinv35141 Davidia involucrata HOM05D000042 ORTHO05D000028 6.2e-07 58.5 110 36.4
Gohir.A11G083700 Gossypium hirsutum HOM05D000042 ORTHO05D000028 6.2e-07 58.5 117 36.8
Medtr4g102530 Medicago truncatula HOM05D000042 ORTHO05D000028 6.2e-07 58.5 117 39.3
Sabra02G0119900 Salix brachista HOM05D000042 ORTHO05D000028 6.2e-07 58.5 117 35.9
Ah.05g175750 Amaranthus hybridus HOM05D000042 ORTHO05D000028 8.0e-07 58.2 110 34.5
Duzib268G0181 Durio zibethinus HOM05D000042 ORTHO05D000028 8.0e-07 58.2 109 38.5
FAN03G0429 Fragaria x ananassa HOM05D000042 ORTHO05D000028 8.0e-07 58.2 110 37.3
Gohir.D12G105900 Gossypium hirsutum HOM05D000042 ORTHO05D000028 8.0e-07 58.2 117 37.6
A05p05620 Brassica napus HOM05D000042 ORTHO05D000028 1.1e-06 57.8 110 34.5
BraA05t19535Z Brassica rapa HOM05D000042 ORTHO05D000028 1.1e-06 57.8 110 34.5
Duzib205G1573 Durio zibethinus HOM05D000042 ORTHO05D000028 1.1e-06 57.8 110 39.1
PSO782G3888 Papaver somniferum HOM05D000042 ORTHO05D000028 1.1e-06 57.8 116 40.5
Atru.chr5.369 Acer truncatum HOM05D000042 ORTHO05D000028 1.4e-06 57.4 129 34.1
ClCG06G000230 Citrullus lanatus HOM05D000042 ORTHO05D000028 1.4e-06 57.4 117 36.8
FvH4_7g12700 Fragaria vesca HOM05D000042 ORTHO05D000028 1.4e-06 57.4 110 38.2
FAN01G1844 Fragaria x ananassa HOM05D000042 ORTHO05D000028 1.4e-06 57.4 110 38.2
FAN06G0641 Fragaria x ananassa HOM05D000042 ORTHO05D000028 1.4e-06 57.4 110 38.2
FAN06G3572 Fragaria x ananassa HOM05D000042 ORTHO05D000028 1.4e-06 57.4 110 38.2
FAN10G4133 Fragaria x ananassa HOM05D000042 ORTHO05D000028 1.4e-06 57.4 110 36.4
Psat4g197920 Pisum sativum HOM05D000042 ORTHO05D000028 1.4e-06 57.4 110 33.6
Potri.014G074200 Populus trichocarpa HOM05D000042 ORTHO05D000028 1.4e-06 57.4 109 35.8
TPR.G812 Trifolium pratense HOM05D000042 ORTHO05D000028 1.4e-06 57.4 110 36.4
MELO3C006159.2 Cucumis melo HOM05D000042 ORTHO05D000028 1.8e-06 57.0 119 38.7
Thhalv10001632m.g Eutrema salsugineum HOM05D000042 ORTHO05D000028 1.8e-06 57.0 110 33.6
Glyma.07G080900 Glycine max HOM05D000042 ORTHO05D000028 1.8e-06 57.0 114 36.8
MD02G1197400 Malus domestica HOM05D000042 ORTHO05D000028 1.8e-06 57.0 118 36.4
Medtr8g033250 Medicago truncatula HOM05D000042 ORTHO05D000028 1.8e-06 57.0 112 37.5
Sp4g27700 Schrenkiella parvula HOM05D000042 ORTHO05D000028 1.8e-06 57.0 110 33.6
BraA03t11729Z Brassica rapa HOM05D000042 ORTHO05D000028 2.3e-06 56.6 110 34.5
Carub.0004s2831 Capsella rubella HOM05D000042 ORTHO05D000028 2.3e-06 56.6 110 37.3
FAN10G3806 Fragaria x ananassa HOM05D000042 ORTHO05D000028 2.3e-06 56.6 110 36.4
Glyma.09G266200 Glycine max HOM05D000042 ORTHO05D000028 2.3e-06 56.6 112 38.4
Psat4g197800 Pisum sativum HOM05D000042 ORTHO05D000028 2.3e-06 56.6 112 37.5
TAR636G2012 Trochodendron aralioides HOM05D000042 ORTHO05D000028 2.3e-06 56.6 117 40.2
BcaC02g12194 Brassica carinata HOM05D000042 ORTHO05D000028 3.1e-06 56.2 110 37.3
C04p06570 Brassica napus HOM05D000042 ORTHO05D000028 3.1e-06 56.2 110 37.3
Ciclev10022568m.g Citrus clementina HOM05D000042 ORTHO05D000028 3.1e-06 56.2 117 37.6
Gohir.D11G087800 Gossypium hirsutum HOM05D000042 ORTHO05D000028 3.1e-06 56.2 117 37.6
Potri.003G119700 Populus trichocarpa HOM05D000042 ORTHO05D000028 3.1e-06 56.2 109 37.6
Sed0009751 Sechium edule HOM05D000042 ORTHO05D000028 3.1e-06 56.2 110 39.1
vmacro13354 Vaccinium macrocarpon HOM05D000042 ORTHO05D000028 3.1e-06 56.2 109 38.5
CSS0028905 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 4.0e-06 55.8 109 38.5
MELO3C022515.2 Cucumis melo HOM05D000042 ORTHO05D000028 4.0e-06 55.8 109 37.6
Migut.F01157 Erythranthe guttata HOM05D000042 ORTHO05D000028 4.0e-06 55.8 109 36.7
Glyma.17G132700 Glycine max HOM05D000042 ORTHO05D000028 4.0e-06 55.8 115 36.5
Lalb_Chr05g0225151 Lupinus albus HOM05D000042 ORTHO05D000028 4.0e-06 55.8 115 33.0
Manes.06G141600 Manihot esculenta HOM05D000042 ORTHO05D000028 4.0e-06 55.8 50 58.0
Atru.chr9.1506 Acer truncatum HOM05D000042 ORTHO05D000028 5.2e-06 55.5 110 40.9
BcaB01g03264 Brassica carinata HOM05D000042 ORTHO05D000028 5.2e-06 55.5 110 37.3
BolC4t22281H Brassica oleracea HOM05D000042 ORTHO05D000028 5.2e-06 55.5 111 36.9
CSS0009886 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 5.2e-06 55.5 109 38.5
CANSAT21G1288 Cannabis sativa HOM05D000042 ORTHO05D000028 5.2e-06 55.5 118 36.4
CiPaw.01G258100 Carya illinoinensis HOM05D000042 ORTHO05D000028 5.2e-06 55.5 110 40.0
Glyma.18G224500 Glycine max HOM05D000042 ORTHO05D000028 5.2e-06 55.5 112 35.7
Nitab4.5_0003356g0020 Nicotiana tabacum HOM05D000042 ORTHO05D000028 5.2e-06 55.5 110 38.2
SalBow7G1396 Salvia bowleyana HOM05D000042 ORTHO05D000028 5.2e-06 55.5 117 34.2
Sp6g14110 Schrenkiella parvula HOM05D000042 ORTHO05D000028 5.2e-06 55.5 110 35.5
ATR0661G049 Amborella trichopoda HOM05D000042 ORTHO05D000028 6.8e-06 55.1 118 38.1
MSTRG.8779 Avicennia marina HOM05D000042 ORTHO05D000028 6.8e-06 55.1 108 36.1
C03p30160 Brassica napus HOM05D000042 ORTHO05D000028 6.8e-06 55.1 110 36.4
CsaV3_6G006020 Cucumis sativus L. HOM05D000042 ORTHO05D000028 6.8e-06 55.1 109 37.6
Manes.05G041900 Manihot esculenta HOM05D000042 ORTHO05D000028 6.8e-06 55.1 110 36.4
Peaxi162Scf00021g00117 Petunia axillaris HOM05D000042 ORTHO05D000028 6.8e-06 55.1 109 41.3
Aa31LG1G27130 Aethionema arabicum HOM05D000042 ORTHO05D000028 8.9e-06 54.7 115 33.0
BcaB01g03280 Brassica carinata HOM05D000042 ORTHO05D000028 8.9e-06 54.7 110 36.4
BcaC01g05117 Brassica carinata HOM05D000042 ORTHO05D000028 8.9e-06 54.7 110 34.5
CANSAT56G0334 Cannabis sativa HOM05D000042 ORTHO05D000028 8.9e-06 54.7 110 36.4
Migut.B01668 Erythranthe guttata HOM05D000042 ORTHO05D000028 8.9e-06 54.7 109 36.7
Prupe.2G151200 Prunus persica HOM05D000042 ORTHO05D000028 8.9e-06 54.7 118 33.9
PGR042G0371 Punica granatum HOM05D000042 ORTHO05D000028 8.9e-06 54.7 114 37.7
PGR142G4047 Punica granatum HOM05D000042 ORTHO05D000028 8.9e-06 54.7 113 38.1
QL08p051133 Quercus lobata HOM05D000042 ORTHO05D000028 8.9e-06 54.7 119 36.1
QL93p0869_0062 Quercus lobata HOM05D000042 ORTHO05D000028 8.9e-06 54.7 119 36.1
GSVIVG01018446001 Vitis vinifera HOM05D000042 ORTHO05D000028 8.9e-06 54.7 111 35.1


User provided reference genes

Program Settings