Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 2.5e-50 201.8 103 100.0
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 1.1e-26 123.2 66 92.4
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 3.9e-19 98.2 67 71.6
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 6.6e-19 97.4 71 67.6
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 6.6e-19 97.4 66 71.2
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 1.1e-18 96.7 59 78.0
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 1.5e-18 96.3 68 69.1
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 2.5e-18 95.5 66 69.7
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 4.3e-18 94.7 66 69.7
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 5.6e-18 94.4 59 72.9
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 7.3e-18 94.0 79 58.2
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 9.6e-18 93.6 66 68.2
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 1.6e-17 92.8 59 74.6
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 2.1e-17 92.4 66 65.2
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 2.1e-17 92.4 66 68.2
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 4.8e-17 91.3 59 72.9
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 4.8e-17 91.3 66 66.7
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 6.2e-17 90.9 66 65.2
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 8.1e-17 90.5 59 74.6
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 8.1e-17 90.5 66 65.2
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 8.1e-17 90.5 68 63.2
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 8.1e-17 90.5 68 61.8
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 1.1e-16 90.1 66 65.2
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 1.1e-16 90.1 59 72.9
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 1.1e-16 90.1 57 71.9
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 1.1e-16 90.1 68 61.8
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 1.1e-16 90.1 59 74.6
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 1.4e-16 89.7 66 66.7
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 1.4e-16 89.7 59 72.9
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 1.4e-16 89.7 66 63.6
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 1.4e-16 89.7 66 63.6
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 1.8e-16 89.4 66 68.2
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 2.4e-16 89.0 71 62.0
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 2.4e-16 89.0 66 63.6
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 2.4e-16 89.0 68 61.8
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 3.1e-16 88.6 61 65.6
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 3.1e-16 88.6 66 68.2
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 4.0e-16 88.2 68 61.8
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 5.3e-16 87.8 66 63.6
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 5.3e-16 87.8 66 63.6
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 5.3e-16 87.8 66 63.6
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 5.3e-16 87.8 66 63.6
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 5.3e-16 87.8 66 63.6
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 5.3e-16 87.8 68 61.8
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 6.9e-16 87.4 68 61.8
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 6.9e-16 87.4 57 71.9
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 6.9e-16 87.4 57 71.9
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 9.0e-16 87.0 68 60.3
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 9.0e-16 87.0 68 63.2
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 9.0e-16 87.0 71 59.2
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 9.0e-16 87.0 63 65.1
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 1.2e-15 86.7 66 63.6
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 1.2e-15 86.7 68 58.8
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 1.5e-15 86.3 62 64.5
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 1.5e-15 86.3 66 60.6
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 1.5e-15 86.3 68 58.8
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 1.5e-15 86.3 68 61.8
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 2.0e-15 85.9 80 56.2
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 2.6e-15 85.5 62 62.9
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 2.6e-15 85.5 66 60.6
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 3.4e-15 85.1 62 64.5
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 4.4e-15 84.7 71 60.6
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 4.4e-15 84.7 68 58.8
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 7.6e-15 84.0 66 62.1
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 9.9e-15 83.6 59 64.4
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 9.9e-15 83.6 71 59.2
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 9.9e-15 83.6 66 59.1
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 1.3e-14 83.2 68 57.4
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 1.3e-14 83.2 73 52.1
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 1.7e-14 82.8 68 55.9
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 2.2e-14 82.4 66 62.1
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 2.9e-14 82.0 71 54.9
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 8.4e-14 80.5 57 66.7
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 1.4e-13 79.7 66 59.1
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 1.9e-13 79.3 62 58.1
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 1.9e-13 79.3 77 54.5
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 3.2e-13 78.6 66 56.1
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 1.2e-12 76.6 66 51.5
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 1.6e-12 76.3 67 55.2
MD16G1169600 Malus domestica HOM05D007625 ORTHO05D009738 6.0e-12 74.3 74 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 1.0e-11 73.6 68 47.1
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 6.2e-09 64.3 67 44.8
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.1e-08 63.5 67 44.8
Glyma.19G060100 Glycine max HOM05D007625 ORTHO05D009738 3.8e-06 55.1 45 53.3
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 4.9e-06 54.7 67 40.3


User provided reference genes

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