Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 7.3e-256 886.7 444 100.0
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 7.2e-187 657.5 448 75.4
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 2.1e-178 629.4 448 69.9
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 1.4e-177 626.7 449 70.6
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 4.4e-176 621.7 448 69.6
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 1.8e-174 616.3 459 69.7
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 2.6e-173 612.5 447 68.7
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 1.3e-172 610.1 453 69.5
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 2.2e-172 609.4 447 68.2
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 2.5e-171 605.9 453 70.9
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 2.5e-171 605.9 451 69.4
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 3.2e-171 605.5 449 67.7
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 7.2e-171 604.4 450 70.2
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 1.6e-170 603.2 450 67.8
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 1.4e-169 600.1 448 68.3
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 1.8e-169 599.7 449 70.2
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 3.7e-167 592.0 426 69.7
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.4e-166 590.1 449 65.9
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.8e-166 589.7 449 69.0
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 9.1e-166 587.4 491 62.9
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 2.0e-165 586.3 445 67.0
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 5.9e-165 584.7 455 65.3
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 1.3e-164 583.6 466 64.2
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 1.1e-163 580.5 449 67.0
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 3.2e-163 578.9 443 65.9
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 4.2e-163 578.6 449 67.5
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 1.2e-162 577.0 448 65.4
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 2.1e-162 576.2 448 65.6
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 2.7e-162 575.9 446 66.8
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 1.8e-161 573.2 450 66.9
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 2.3e-161 572.8 445 65.4
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 4.0e-161 572.0 472 63.3
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 4.0e-161 572.0 446 65.2
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 2.6e-160 569.3 448 65.0
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 7.5e-160 567.8 447 64.2
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 8.3e-159 564.3 447 63.8
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 8.3e-159 564.3 446 65.5
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.1e-158 563.9 445 64.9
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.4e-158 563.5 452 65.0
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 3.1e-158 562.4 452 65.3
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 4.1e-158 562.0 428 66.6
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 4.1e-158 562.0 449 65.0
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 7.0e-158 561.2 428 66.4
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 2.7e-157 559.3 452 65.3
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 3.5e-157 558.9 402 70.6
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.5e-157 558.5 447 63.8
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 2.2e-156 556.2 449 64.1
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.5e-155 553.5 451 64.7
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 4.2e-155 552.0 450 64.7
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 3.6e-154 548.9 452 62.4
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 8.0e-154 547.7 344 78.8
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 1.8e-153 546.6 450 64.7
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.0e-153 545.8 446 63.5
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 5.7e-152 541.6 446 63.0
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 5.7e-152 541.6 447 63.5
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 7.5e-152 541.2 454 63.9
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 9.8e-152 540.8 446 64.3
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.4e-150 536.2 457 63.2
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 7.0e-150 534.6 453 61.1
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 1.6e-149 533.5 447 62.0
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 2.0e-149 533.1 452 61.9
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 3.5e-149 532.3 448 62.5
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 3.5e-149 532.3 341 76.5
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 1.7e-148 530.0 452 63.7
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 2.3e-148 529.6 449 63.5
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 5.0e-148 528.5 412 66.5
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 4.2e-147 525.4 447 61.7
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 7.2e-147 524.6 448 62.5
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 9.5e-147 524.2 449 61.7
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 6.1e-146 521.5 418 63.6
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 1.4e-145 520.4 448 61.4
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 3.0e-145 519.2 343 74.1
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.2e-144 517.3 450 59.8
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 1.2e-144 517.3 449 60.4
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 2.0e-144 516.5 445 58.9
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.3e-143 513.8 384 67.7
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 1.7e-143 513.5 491 58.2
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 2.2e-143 513.1 446 62.1
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 8.3e-143 511.1 383 67.6
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 3.1e-142 509.2 474 58.6
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 7.0e-142 508.1 464 59.5
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 2.0e-141 506.5 468 59.4
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 3.3e-139 499.2 458 57.9
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.2e-138 497.3 388 65.2
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 5.8e-136 488.4 337 69.7
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 4.9e-135 485.3 455 58.9
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 1.4e-134 483.8 460 57.6
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 3.2e-134 482.6 455 58.7
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 7.0e-134 481.5 369 68.0
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 9.2e-134 481.1 357 68.9
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 4.6e-133 478.8 330 71.8
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 4.6e-133 478.8 465 55.3
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 7.8e-125 451.4 473 51.4
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 9.5e-123 444.5 298 72.1
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 1.7e-119 433.7 256 80.5
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 3.2e-118 429.5 338 63.6
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 4.1e-118 429.1 455 53.0
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 6.2e-114 415.2 392 57.1
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 1.8e-113 413.7 378 56.1
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 2.9e-111 406.4 370 59.2
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 2.4e-110 403.3 358 60.1
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.0e-108 397.9 256 72.7
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.0e-108 397.9 254 74.4
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 5.3e-105 385.6 514 45.3
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.5e-101 372.9 257 68.9
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 7.8e-101 371.7 348 60.3
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 6.6e-100 368.6 401 50.1
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.5e-99 367.5 290 65.9
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 4.5e-96 355.9 371 49.3
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 6.4e-95 352.1 364 49.2
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 4.8e-90 335.9 244 66.0
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 6.2e-90 335.5 296 58.8
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 1.4e-86 324.3 334 53.6
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 2.7e-85 320.1 475 41.7
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.9e-77 292.0 448 43.3
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.8e-68 264.2 390 42.6
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 3.2e-54 216.9 164 66.5
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 4.2e-54 216.5 258 46.9
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 5.5e-54 216.1 236 53.4
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 2.5e-46 190.7 189 56.1
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.4e-41 174.9 330 37.3
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 4.4e-35 153.3 122 63.1
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 5.7e-35 152.9 93 71.0
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 2.7e-32 144.1 134 61.2
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 1.9e-30 137.9 393 30.8
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 1.3e-26 125.2 137 53.3
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 2.2e-26 124.4 193 45.6
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-24 118.2 126 50.0
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.0e-23 115.5 60 83.3
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 1.7e-23 114.8 191 35.6
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 6.0e-16 89.7 74 62.2
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.3e-12 77.8 216 33.3
PGSC0003DMG401006600 Solanum tuberosum HOM05D032728 ORTHO05D007283 3.9e-07 60.5 87 39.1
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 1.9e-06 58.2 103 42.7


User provided reference genes

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