Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02949 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 0.0e+00 1249.6 640 100.0
Aqoxy3G00687_Aqoxy3G00688 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 7.9e-195 684.5 810 54.0
Nn4g23115 Nelumbo nucifera HOM05D003594 ORTHO05D004268 2.5e-100 370.5 820 35.9
TAR622G0410 Trochodendron aralioides HOM05D003594 ORTHO05D004268 7.3e-100 369.0 832 34.9
Dinv11846 Davidia involucrata HOM05D003594 ORTHO05D004268 8.4e-96 355.5 804 34.3
PSO478G3548 Papaver somniferum HOM05D003594 ORTHO05D004268 6.9e-90 335.9 801 34.8
PSO017G2985 Papaver somniferum HOM05D003594 ORTHO05D004268 5.8e-89 332.8 796 34.4
CSS0019720 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 6.0e-86 322.8 794 34.3
CSS0031708 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 1.0e-85 322.0 791 34.1
CiPaw.13G039500 Carya illinoinensis HOM05D003594 ORTHO05D004268 7.4e-84 315.8 816 33.1
Lj3C928G2 Lonicera japonica HOM05D003594 ORTHO05D004268 2.4e-82 310.8 788 32.9
Cfa011279 Carpinus fangiana HOM05D003594 ORTHO05D004268 2.0e-81 307.8 807 33.3
Manes.11G108901 Manihot esculenta HOM05D003594 ORTHO05D004268 5.5e-79 299.7 796 33.7
Potri.010G238000 Populus trichocarpa HOM05D003594 ORTHO05D004268 5.1e-77 293.1 804 32.3
Sabra10G0186200 Salix brachista HOM05D003594 ORTHO05D004268 1.1e-76 292.0 798 32.3
MBI02_g14487_MAGBIO Magnolia biondii HOM05D003594 ORTHO05D004268 2.5e-76 290.8 815 33.4
GSVIVG01032568001 Vitis vinifera HOM05D003594 ORTHO05D004268 2.5e-76 290.8 795 32.7
Prupe.3G003400 Prunus persica HOM05D003594 ORTHO05D004268 2.8e-75 287.3 814 32.8
QL04p046058 Quercus lobata HOM05D003594 ORTHO05D004268 9.0e-74 282.3 842 31.6
Rhsim03G0098900 Rhododendron simsii HOM05D003594 ORTHO05D004268 2.6e-73 280.8 815 30.4
Actinidia06697 Actinidia chinensis HOM05D003594 ORTHO05D004268 1.3e-72 278.5 804 33.1
Cc02_g29780 Coffea canephora HOM05D003594 ORTHO05D004268 1.7e-72 278.1 803 30.5
MD17G1284000 Malus domestica HOM05D003594 ORTHO05D004268 1.1e-71 275.4 831 32.4
Thecc.10G111800 Theobroma cacao HOM05D003594 ORTHO05D004268 7.2e-71 272.7 804 31.2
TWI38G1480 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 2.7e-70 270.8 813 32.5
Nitab4.5_0001437g0090 Nicotiana tabacum HOM05D003594 ORTHO05D004268 1.8e-69 268.1 815 30.3
Gohir.A06G169100 Gossypium hirsutum HOM05D003594 ORTHO05D004268 3.9e-69 266.9 789 30.9
Cc02_g09740 Coffea canephora HOM05D003594 ORTHO05D004268 1.1e-68 265.4 830 28.8
Gohir.D06G176700 Gossypium hirsutum HOM05D003594 ORTHO05D004268 4.3e-68 263.5 808 30.1
Lsat_1_v5_gn_2_104580 Lactuca sativa HOM05D003594 ORTHO05D004268 4.3e-68 263.5 685 32.4
Duzib052G0830 Durio zibethinus HOM05D003594 ORTHO05D004268 9.7e-68 262.3 815 30.9
Cpa.g.sc183.16 Carica papaya HOM05D003594 ORTHO05D004268 1.3e-67 261.9 753 31.3
ATR0737G134 Amborella trichopoda HOM05D003594 ORTHO05D004268 2.2e-67 261.2 643 34.1
Gorai.010G208000 Gossypium raimondii HOM05D003594 ORTHO05D004268 2.8e-67 260.8 810 31.0
Migut.F00912 Erythranthe guttata HOM05D003594 ORTHO05D004268 1.4e-66 258.5 799 29.5
Glyma.16G027600 Glycine max HOM05D003594 ORTHO05D004268 1.8e-66 258.1 828 30.2
RcHm_v2.0_Chr7g0211051 Rosa chinensis HOM05D003594 ORTHO05D004268 1.8e-66 258.1 805 31.4
PGSC0003DMG400023977 Solanum tuberosum HOM05D003594 ORTHO05D004268 5.3e-66 256.5 791 28.7
DCAR_006339 Daucus carota HOM05D003594 ORTHO05D004268 6.9e-66 256.1 815 29.6
FAN08G1578 Fragaria x ananassa HOM05D003594 ORTHO05D004268 6.9e-66 256.1 670 31.9
VMungo0331G0994 Vigna mungo HOM05D003594 ORTHO05D004268 1.5e-65 255.0 805 30.9
Glyma.07G058700 Glycine max HOM05D003594 ORTHO05D004268 4.5e-65 253.4 816 30.1
Solyc11g007010.2 Solanum lycopersicum HOM05D003594 ORTHO05D004268 4.5e-65 253.4 790 29.0
HPP92_013069 Vanilla planifolia HOM05D003594 ORTHO05D004268 4.5e-65 253.4 807 29.5
FAN04G1757 Fragaria x ananassa HOM05D003594 ORTHO05D004268 5.9e-65 253.1 803 30.1
Eucgr.J00989 Eucalyptus grandis HOM05D003594 ORTHO05D004268 7.7e-65 252.7 807 30.1
ECA238G3867 Erigeron canadensis HOM05D003594 ORTHO05D004268 1.0e-64 252.3 806 29.4
Nitab4.5_0005622g0060 Nicotiana tabacum HOM05D003594 ORTHO05D004268 1.0e-64 252.3 834 29.1
Sopen11g002930 Solanum pennellii HOM05D003594 ORTHO05D004268 1.0e-64 252.3 792 29.3
Peaxi162Scf00173g00417 Petunia axillaris HOM05D003594 ORTHO05D004268 6.5e-64 249.6 817 28.9
Ciclev10027803m.g Citrus clementina HOM05D003594 ORTHO05D004268 1.4e-63 248.4 819 30.3
HanXRQChr11g0342181 Helianthus annuus HOM05D003594 ORTHO05D004268 7.2e-63 246.1 797 28.6
FAN18G4146 Fragaria x ananassa HOM05D003594 ORTHO05D004268 9.4e-63 245.7 803 30.5
FvH4_5g22640 Fragaria vesca HOM05D003594 ORTHO05D004268 1.6e-62 245.0 802 30.4
FAN18G3192 Fragaria x ananassa HOM05D003594 ORTHO05D004268 4.6e-62 243.4 803 30.3
Medtr3g075460 Medicago truncatula HOM05D003594 ORTHO05D004268 1.0e-61 242.3 796 28.9
Ca_23589_v3 Cicer arietinum L. HOM05D003594 ORTHO05D004268 8.8e-61 239.2 813 29.5
Medtr8g028030 Medicago truncatula HOM05D003594 ORTHO05D004268 2.5e-60 237.7 816 29.9
MD09G1289100 Malus domestica HOM05D003594 ORTHO05D004268 7.4e-60 236.1 392 41.6
Psat4g159240 Pisum sativum HOM05D003594 ORTHO05D004268 1.8e-58 231.5 808 29.3
Lalb_Chr10g0100231 Lupinus albus HOM05D003594 ORTHO05D004268 3.1e-58 230.7 812 28.8
Lj3g0004598 Lotus japonicus HOM05D003594 ORTHO05D004268 5.3e-58 229.9 818 29.6
CANSAT56G3624 Cannabis sativa HOM05D003594 ORTHO05D004268 1.5e-57 228.4 814 29.1
EL10Ac4g08659 Beta vulgaris HOM05D003594 ORTHO05D004268 3.4e-57 227.3 804 28.2
MELO3C012354.2 Cucumis melo HOM05D003594 ORTHO05D004268 2.2e-56 224.6 535 32.1
Oeu025587.1 Olea europaea HOM05D003594 ORTHO05D004268 2.2e-56 224.6 889 28.8
Dinv06533 Davidia involucrata HOM05D003594 ORTHO05D004268 8.5e-56 222.6 596 32.6
Atru.chr12.1013 Acer truncatum HOM05D003594 ORTHO05D004268 1.1e-55 222.2 575 34.8
COL.COLO4_28858 Corchorus olitorius HOM05D003594 ORTHO05D004268 1.6e-54 218.4 816 28.8
Phvul.010G110700 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 1.6e-54 218.4 824 28.9
Cc02_g29810 Coffea canephora HOM05D003594 ORTHO05D004268 2.7e-54 217.6 427 34.9
Sed0007749 Sechium edule HOM05D003594 ORTHO05D004268 2.7e-54 217.6 790 28.1
Sed0011677 Sechium edule HOM05D003594 ORTHO05D004268 3.6e-54 217.2 566 31.1
arahy.Tifrunner.gnm1.ann1.8EA83L Arachis hypogaea HOM05D003594 ORTHO05D004268 1.4e-53 215.3 838 27.3
ClCG09G007450 Citrullus lanatus HOM05D003594 ORTHO05D004268 8.8e-53 212.6 638 29.6
Nn3g17196 Nelumbo nucifera HOM05D003594 ORTHO05D004268 1.5e-52 211.8 366 41.3
Lj1g0028024 Lotus japonicus HOM05D003594 ORTHO05D004268 2.0e-52 211.5 633 31.9
SalBow6G4638 Salvia bowleyana HOM05D003594 ORTHO05D004268 2.8e-51 207.6 812 27.8
Carub.0001s2847 Capsella rubella HOM05D003594 ORTHO05D004268 6.3e-51 206.5 792 29.5
arahy.Tifrunner.gnm1.ann1.Q3AX4Y Arachis hypogaea HOM05D003594 ORTHO05D004268 8.2e-51 206.1 548 31.9
MD09G1292100 Malus domestica HOM05D003594 ORTHO05D004268 8.2e-51 206.1 523 34.4
Ah.04g162260 Amaranthus hybridus HOM05D003594 ORTHO05D004268 1.1e-50 205.7 806 27.3
CAN.G645.3 Capsicum annuum HOM05D003594 ORTHO05D004268 1.1e-50 205.7 776 27.3
Os05g0295900 Oryza sativa ssp. japonica HOM05D003594 ORTHO05D004268 2.4e-50 204.5 823 26.9
Sp1g26080 Schrenkiella parvula HOM05D003594 ORTHO05D004268 2.0e-49 201.4 620 31.5
SGA_v2.0_scaffold295G47526 Striga asiatica HOM05D003594 ORTHO05D004268 2.6e-49 201.1 528 32.2
Sc06g0002330 Simmondsia chinensis HOM05D003594 ORTHO05D004268 3.5e-49 200.7 790 27.1
Phvul.003G001400 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 7.7e-49 199.5 525 33.9
THA.LOC104820658 Tarenaya hassleriana HOM05D003594 ORTHO05D004268 2.9e-48 197.6 674 29.4
CARHR029630 Cardamine hirsuta HOM05D003594 ORTHO05D004268 1.1e-47 195.7 660 28.2
Thhalv10006813m.g Eutrema salsugineum HOM05D003594 ORTHO05D004268 7.2e-47 193.0 617 29.8
A09p36300 Brassica napus HOM05D003594 ORTHO05D004268 2.7e-46 191.0 618 28.5
BolC3t19907H Brassica oleracea HOM05D003594 ORTHO05D004268 3.6e-46 190.7 788 27.7
BraA09t39154Z Brassica rapa HOM05D003594 ORTHO05D004268 6.1e-46 189.9 618 28.8
AUR62043305 Chenopodium quinoa HOM05D003594 ORTHO05D004268 6.1e-46 189.9 302 37.4
BcaC01g00173 Brassica carinata HOM05D003594 ORTHO05D004268 2.3e-45 188.0 559 29.9
C03p76500 Brassica napus HOM05D003594 ORTHO05D004268 2.3e-45 188.0 559 29.9
BcaB03g12203 Brassica carinata HOM05D003594 ORTHO05D004268 5.2e-45 186.8 591 29.3
CDE09G0981 Ceratophyllum demersum HOM05D003594 ORTHO05D004268 8.8e-45 186.0 821 27.3
Haze_02506 Corylus avellana HOM05D003594 ORTHO05D004268 1.5e-44 185.3 357 39.5
BcaC05g27050 Brassica carinata HOM05D003594 ORTHO05D004268 5.7e-44 183.3 793 26.9
A08p24610 Brassica napus HOM05D003594 ORTHO05D004268 7.5e-44 183.0 614 28.5
C05p29080 Brassica napus HOM05D003594 ORTHO05D004268 1.3e-43 182.2 793 26.7
Hund23993 Selenicereus undatus HOM05D003594 ORTHO05D004268 2.2e-43 181.4 544 32.5
BolC5t31639H Brassica oleracea HOM05D003594 ORTHO05D004268 2.8e-43 181.0 793 26.7
CsaV3_5G035440 Cucumis sativus L. HOM05D003594 ORTHO05D004268 2.8e-43 181.0 301 38.5
CsaV3_5G035480 Cucumis sativus L. HOM05D003594 ORTHO05D004268 2.8e-43 181.0 301 38.5
Hund22286 Selenicereus undatus HOM05D003594 ORTHO05D004268 4.8e-43 180.3 541 33.1
Zm00001eb231330 Zea mays HOM05D003594 ORTHO05D004268 3.1e-42 177.6 553 31.5
AUR62042073 Chenopodium quinoa HOM05D003594 ORTHO05D004268 5.3e-42 176.8 715 26.3
ClCG05G018390 Citrullus lanatus HOM05D003594 ORTHO05D004268 5.3e-42 176.8 763 26.1
TPR.G8757 Trifolium pratense HOM05D003594 ORTHO05D004268 1.2e-41 175.6 537 30.2
AT1G30240 Arabidopsis thaliana HOM05D003594 ORTHO05D004268 3.5e-41 174.1 798 27.6
Gohir.D09G017550 Gossypium hirsutum HOM05D003594 ORTHO05D004268 2.9e-40 171.0 622 28.5
AL1G44160 Arabidopsis lyrata HOM05D003594 ORTHO05D004268 3.8e-40 170.6 793 26.5
PGR044G2128 Punica granatum HOM05D003594 ORTHO05D004268 3.8e-40 170.6 799 25.9
BcaB07g32622 Brassica carinata HOM05D003594 ORTHO05D004268 5.0e-40 170.2 679 26.7
Gorai.006G020600 Gossypium raimondii HOM05D003594 ORTHO05D004268 2.7e-38 164.5 621 27.2
Aa31sc91G80 Aethionema arabicum HOM05D003594 ORTHO05D004268 6.1e-38 163.3 628 28.7
GSVIVG01011385001 Vitis vinifera HOM05D003594 ORTHO05D004268 8.0e-38 162.9 489 29.7
MSTRG.27536 Avicennia marina HOM05D003594 ORTHO05D004268 1.5e-36 158.7 204 47.1
SMO364G0406 Selaginella moellendorffii HOM05D003594 ORTHO05D004268 2.8e-35 154.5 289 39.1
Mapoly0108s0040 Marchantia polymorpha HOM05D003594 ORTHO05D004268 1.4e-34 152.1 313 36.7
Gohir.A09G018100 Gossypium hirsutum HOM05D003594 ORTHO05D004268 2.0e-33 148.3 421 30.2
Nn3g17199 Nelumbo nucifera HOM05D003594 ORTHO05D004268 5.0e-32 143.7 375 31.2
Pp3c8_9490 Physcomitrium patens HOM05D003594 ORTHO05D004268 1.1e-31 142.5 292 35.6
BraA08t34416Z Brassica rapa HOM05D003594 ORTHO05D004268 2.1e-30 138.3 517 27.1
Cc02_g29830 Coffea canephora HOM05D003594 ORTHO05D004268 6.8e-29 133.3 168 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2673 Anthoceros agrestis HOM05D003594 ORTHO05D004268 2.6e-28 131.3 278 34.5
CsaV3_5G035460 Cucumis sativus L. HOM05D003594 ORTHO05D004268 4.4e-28 130.6 269 33.8
Hma1.2p1_0145F.1_g065330 Hydrangea macrophylla HOM05D003594 ORTHO05D004268 8.3e-27 126.3 224 37.5
Pp3c15_8100 Physcomitrium patens HOM05D003594 ORTHO05D004268 1.1e-26 125.9 568 25.7
Pp3c15_8103 Physcomitrium patens HOM05D003594 ORTHO05D004268 1.1e-26 125.9 568 25.7
SEGI_05252 Sequoiadendron giganteum HOM05D003594 ORTHO05D004268 3.1e-26 124.4 241 34.4
Cc02_g09730 Coffea canephora HOM05D003594 ORTHO05D004268 4.1e-26 124.0 360 30.0
ATR0564G271 Amborella trichopoda HOM05D003594 ORTHO05D004268 4.5e-25 120.6 307 34.5
Hund22291 Selenicereus undatus HOM05D003594 ORTHO05D004268 2.5e-23 114.8 122 53.3
CBR_g29875 Chara braunii HOM05D003594 ORTHO05D000497 5.2e-21 107.1 363 27.8
CBR_g45421 Chara braunii HOM05D003594 ORTHO05D004268 1.7e-19 102.1 365 25.8
Actinidia36695 Actinidia chinensis HOM05D003594 ORTHO05D004268 2.4e-18 98.2 295 32.5
Atru.chr12.1014 Acer truncatum HOM05D003594 ORTHO05D004268 9.2e-18 96.3 123 47.2
TPR.G23930 Trifolium pratense HOM05D003594 ORTHO05D004268 7.8e-17 93.2 264 31.1
SEGI_27789 Sequoiadendron giganteum HOM05D003594 ORTHO05D004268 1.3e-16 92.4 77 57.1
Haze_02500 Corylus avellana HOM05D003594 ORTHO05D004268 5.0e-16 90.5 73 61.6
TWI63G1716 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 1.1e-15 89.4 125 45.6
Actinidia18596 Actinidia chinensis HOM05D003594 ORTHO05D004268 1.0e-13 82.8 301 29.2
MSTRG.26055 Avicennia marina HOM05D003594 ORTHO05D004268 2.3e-13 81.6 293 29.0
Os06g0343900 Oryza sativa ssp. japonica HOM05D003594 ORTHO05D004268 1.3e-11 75.9 129 38.8
CDE02G4417 Ceratophyllum demersum HOM05D003594 ORTHO05D004268 2.4e-10 71.6 175 34.3
Prupe.6G159300 Prunus persica HOM05D003594 ORTHO05D004268 1.6e-09 68.9 187 29.4
Psat6g218640 Pisum sativum HOM05D001312 ORTHO05D001832 1.7e-08 65.5 70 50.0
Psat6g091000 Pisum sativum HOM05D003335 ORTHO05D003853 5.6e-07 60.5 61 47.5
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 7.3e-07 60.1 63 42.9
CsaV3_5G035520 Cucumis sativus L. HOM05D003594 ORTHO05D004268 6.2e-06 57.0 86 40.7


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