Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 3.7e-70 268.1 135 100.0
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 2.7e-28 129.0 125 49.6
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 3.9e-27 125.2 119 51.3
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 3.9e-27 125.2 119 47.1
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 3.3e-26 122.1 120 48.3
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 2.1e-25 119.4 124 46.8
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 2.1e-25 119.4 119 46.2
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 6.2e-25 117.9 115 50.4
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 6.2e-25 117.9 118 48.3
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 1.1e-24 117.1 126 45.2
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 1.8e-24 116.3 124 46.8
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 4.0e-24 115.2 121 46.3
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 4.0e-24 115.2 120 45.8
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 5.3e-24 114.8 121 45.5
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 5.3e-24 114.8 118 44.9
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 6.9e-24 114.4 120 46.7
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 9.0e-24 114.0 122 46.7
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 1.2e-23 113.6 120 48.3
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 1.5e-23 113.2 120 45.0
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 2.0e-23 112.8 118 46.6
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 2.0e-23 112.8 85 58.8
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 2.6e-23 112.5 96 51.0
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 3.4e-23 112.1 121 44.6
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 3.4e-23 112.1 120 43.3
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 3.4e-23 112.1 118 44.1
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 5.8e-23 111.3 120 46.7
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 5.8e-23 111.3 95 48.4
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 9.9e-23 110.5 118 44.9
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.3e-22 110.2 118 44.9
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 1.3e-22 110.2 119 44.5
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 1.3e-22 110.2 129 44.2
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 1.7e-22 109.8 119 44.5
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 2.2e-22 109.4 118 41.5
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 2.9e-22 109.0 79 60.8
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 3.8e-22 108.6 118 40.7
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 4.9e-22 108.2 95 48.4
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 8.4e-22 107.5 118 43.2
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 2.4e-21 105.9 95 47.4
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 2.4e-21 105.9 124 37.9
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 2.4e-21 105.9 118 44.9
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 5.4e-21 104.8 95 47.4
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 5.4e-21 104.8 122 45.9
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 7.1e-21 104.4 125 44.0
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 7.1e-21 104.4 118 42.4
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 7.1e-21 104.4 120 45.8
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 1.2e-20 103.6 118 44.1
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 1.6e-20 103.2 118 41.5
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 1.6e-20 103.2 95 45.3
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 2.1e-20 102.8 117 41.0
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 2.1e-20 102.8 127 40.2
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 3.5e-20 102.1 124 39.5
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 3.5e-20 102.1 124 39.5
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 3.5e-20 102.1 120 44.2
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 4.6e-20 101.7 120 43.3
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 4.6e-20 101.7 95 45.3
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 4.6e-20 101.7 117 41.0
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 7.9e-20 100.9 120 38.3
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 1.0e-19 100.5 117 40.2
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.3e-19 100.1 120 41.7
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 1.8e-19 99.8 117 40.2
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 3.9e-19 98.6 93 45.2
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 3.9e-19 98.6 121 39.7
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 6.7e-19 97.8 118 40.7
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 8.7e-19 97.4 120 41.7
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 1.1e-18 97.1 123 35.0
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 1.9e-18 96.3 122 41.0
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 1.9e-18 96.3 81 48.1
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 5.6e-18 94.7 118 40.7
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 9.6e-18 94.0 81 50.6
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 3.6e-17 92.0 117 40.2
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 8.1e-17 90.9 98 44.9
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 1.8e-16 89.7 95 43.2
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 5.3e-16 88.2 78 43.6
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 6.9e-16 87.8 93 43.0
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 2.0e-15 86.3 82 46.3
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 7.6e-15 84.3 68 51.5
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 1.7e-14 83.2 117 39.3
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 2.2e-14 82.8 98 40.8
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 1.1e-13 80.5 114 31.6
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 4.2e-13 78.6 79 43.0
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 1.2e-12 77.0 91 44.0
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 2.1e-12 76.3 119 34.5
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 1.1e-10 70.5 57 52.6
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 5.6e-10 68.2 125 34.4
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 9.6e-10 67.4 61 45.9
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 1.6e-09 66.6 143 30.1
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 4.8e-09 65.1 55 50.9
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 3.4e-07 58.9 73 39.7
AagrBONN_evm.TU.Sc2ySwM_362.1645 Anthoceros agrestis HOM05D002174 ORTHO05D005941 4.5e-07 58.5 68 42.6
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 4.5e-07 58.5 73 42.5
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 2.2e-06 56.2 118 33.1
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 6.5e-06 54.7 56 42.9


User provided reference genes

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