Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.4e-74 281.6 140 100.0
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 8.1e-52 207.2 140 72.1
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 3.8e-41 171.8 140 63.6
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 1.0e-38 163.7 140 56.4
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 1.3e-38 163.3 137 58.4
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 3.9e-38 161.8 139 59.0
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.1e-37 160.2 140 55.7
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 1.1e-37 160.2 138 57.2
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.9e-37 159.5 138 58.0
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.3e-37 158.7 130 59.2
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 3.3e-37 158.7 136 58.1
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 3.3e-37 158.7 138 60.1
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 1.3e-36 156.8 138 58.7
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 1.6e-36 156.4 136 60.3
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 2.8e-36 155.6 136 57.4
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 2.8e-36 155.6 138 58.0
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 4.8e-36 154.8 134 58.2
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 4.8e-36 154.8 137 59.1
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 4.8e-36 154.8 137 56.2
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 6.2e-36 154.5 140 57.1
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 6.2e-36 154.5 140 57.1
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 8.1e-36 154.1 136 52.2
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 1.4e-35 153.3 138 55.1
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 3.1e-35 152.1 138 55.8
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 5.3e-35 151.4 140 52.1
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 5.3e-35 151.4 138 53.6
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 6.9e-35 151.0 140 57.9
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 1.2e-34 150.2 138 56.5
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 2.0e-34 149.4 138 55.8
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 2.0e-34 149.4 141 53.9
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 2.0e-34 149.4 136 55.9
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.0e-34 149.4 138 52.9
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 2.6e-34 149.1 140 57.1
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 3.4e-34 148.7 138 52.2
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.4e-34 148.7 138 52.2
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 3.4e-34 148.7 137 54.7
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 4.5e-34 148.3 138 55.8
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 5.8e-34 147.9 138 52.2
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 5.8e-34 147.9 137 52.6
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 9.9e-34 147.1 139 55.4
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 1.3e-33 146.7 138 54.3
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 1.3e-33 146.7 137 54.0
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 1.7e-33 146.4 134 54.5
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 1.7e-33 146.4 138 54.3
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 2.2e-33 146.0 138 52.9
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 2.9e-33 145.6 136 53.7
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 2.9e-33 145.6 136 53.7
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 8.4e-33 144.1 136 54.4
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 1.1e-32 143.7 138 53.6
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 1.4e-32 143.3 130 55.4
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 1.4e-32 143.3 146 52.1
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 2.4e-32 142.5 136 54.4
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 2.4e-32 142.5 136 53.7
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 3.2e-32 142.1 136 53.7
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 4.2e-32 141.7 136 53.7
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 4.2e-32 141.7 138 52.9
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 7.1e-32 141.0 138 54.3
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 7.1e-32 141.0 138 54.3
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 7.1e-32 141.0 136 53.7
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 7.1e-32 141.0 136 53.7
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 1.2e-31 140.2 140 47.9
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 1.2e-31 140.2 138 50.0
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 1.6e-31 139.8 136 47.8
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 1.6e-31 139.8 138 48.6
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 1.6e-31 139.8 138 52.2
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 2.1e-31 139.4 140 47.1
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 2.1e-31 139.4 136 50.0
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.7e-31 139.0 146 50.7
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 2.7e-31 139.0 138 48.6
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 4.6e-31 138.3 142 53.5
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 4.6e-31 138.3 138 54.3
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 6.0e-31 137.9 138 52.9
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 6.0e-31 137.9 128 51.6
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 7.9e-31 137.5 140 46.4
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 7.9e-31 137.5 138 48.6
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.0e-30 137.1 137 51.1
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 1.8e-30 136.3 136 48.5
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 2.3e-30 136.0 135 49.6
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 3.9e-30 135.2 139 52.5
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 8.7e-30 134.0 146 45.9
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 1.9e-29 132.9 137 51.1
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 7.4e-29 131.0 140 47.9
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 9.6e-29 130.6 136 46.3
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 9.6e-29 130.6 140 50.0
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 1.3e-28 130.2 134 50.7
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 1.6e-28 129.8 135 49.6
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 2.1e-28 129.4 135 48.9
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 2.8e-28 129.0 141 47.5
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 3.6e-28 128.6 140 42.9
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 4.8e-28 128.3 141 47.5
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 4.8e-28 128.3 145 47.6
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 4.8e-28 128.3 139 46.8
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 8.1e-28 127.5 140 49.3
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 1.1e-27 127.1 139 43.9
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 1.4e-27 126.7 143 53.1
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 1.4e-27 126.7 139 46.0
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 2.4e-27 125.9 139 48.2
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 2.4e-27 125.9 139 47.5
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 2.4e-27 125.9 139 48.2
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 2.4e-27 125.9 139 48.2
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 2.4e-27 125.9 139 47.5
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 4.0e-27 125.2 138 50.7
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 5.3e-27 124.8 138 50.0
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 5.3e-27 124.8 140 42.9
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 5.3e-27 124.8 140 42.9
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 1.5e-26 123.2 135 49.6
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 4.5e-26 121.7 141 46.1
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 5.8e-26 121.3 128 47.7
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 9.9e-26 120.6 128 47.7
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.3e-25 120.2 139 48.9
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.7e-25 119.8 139 47.5
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 3.8e-25 118.6 135 45.9
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 4.9e-25 118.2 103 56.3
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 4.9e-25 118.2 140 42.9
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 6.4e-25 117.9 139 46.0
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 1.1e-24 117.1 141 42.6
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 1.4e-24 116.7 146 43.8
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 1.9e-24 116.3 146 43.8
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 5.5e-24 114.8 132 46.2
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.7e-23 112.5 116 52.6
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 1.0e-22 110.5 161 42.2
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.8e-22 109.8 110 50.9
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.3e-21 105.1 110 49.1
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 1.6e-20 103.2 143 42.7
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 8.1e-20 100.9 108 45.4
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 9.0e-19 97.4 147 40.1
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 2.9e-17 92.4 107 48.6
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 3.8e-17 92.0 136 40.4
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 4.9e-17 91.7 137 40.9
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 7.1e-16 87.8 154 37.0
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 8.7e-14 80.9 112 42.9
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.9e-13 79.7 130 39.2
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 2.5e-13 79.3 170 35.3
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 1.2e-10 70.5 120 34.2
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 1.7e-09 66.6 123 34.1
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 1.7e-09 66.6 49 65.3
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 1.4e-08 63.5 133 33.8
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 3.6e-07 58.9 123 31.7
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 6.1e-07 58.2 159 29.6
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 1.3e-06 57.0 80 37.5


User provided reference genes

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