Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 2.8e-95 352.1 193 100.0
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 4.5e-37 158.7 194 56.2
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.2e-34 150.6 199 54.8
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 2.0e-32 143.3 217 52.1
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 8.3e-31 137.9 193 52.8
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 7.0e-30 134.8 200 47.0
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 1.2e-29 134.0 192 50.0
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.2e-29 134.0 206 50.0
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.0e-28 131.0 203 48.8
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 1.0e-28 131.0 212 49.1
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 5.0e-28 128.6 206 48.5
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 5.0e-28 128.6 214 46.7
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 3.3e-27 125.9 211 48.3
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 1.6e-26 123.6 214 46.7
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.8e-26 122.9 214 45.3
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 3.6e-26 122.5 193 45.1
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.4e-25 120.6 195 50.3
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.8e-25 120.2 195 46.2
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 4.0e-25 119.0 214 48.6
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 1.5e-24 117.1 213 43.7
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.5e-24 117.1 201 48.3
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 5.8e-24 115.2 162 47.5
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 5.8e-24 115.2 190 47.9
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.3e-23 114.0 180 48.9
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.2e-23 113.2 165 53.9
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.1e-22 110.9 195 48.7
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.9e-22 110.2 187 48.1
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 1.9e-22 110.2 180 47.2
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.4e-22 109.8 202 45.0
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 4.1e-22 109.0 208 43.3
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 7.0e-22 108.2 207 41.1
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 2.0e-21 106.7 191 47.6
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 2.7e-21 106.3 196 45.4
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 3.5e-21 105.9 199 42.2
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 3.5e-21 105.9 184 45.1
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 7.8e-21 104.8 212 38.2
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 1.0e-20 104.4 160 45.6
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 1.7e-20 103.6 161 44.1
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 3.9e-20 102.4 207 42.0
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 1.1e-19 100.9 209 45.9
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 1.1e-19 100.9 208 40.4
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 7.3e-19 98.2 206 43.2
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 7.3e-19 98.2 206 43.2
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 9.5e-19 97.8 143 53.1
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.6e-18 97.1 206 42.7
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.6e-18 97.1 201 43.8
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 1.6e-18 97.1 192 43.8
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 2.1e-18 96.7 169 46.7
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 3.6e-18 95.9 201 38.8
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 4.7e-18 95.5 206 36.9
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 6.2e-18 95.1 188 45.7
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 8.1e-18 94.7 209 41.6
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.1e-17 94.4 208 38.0
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.4e-17 94.0 201 42.3
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.4e-17 94.0 187 40.6
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 1.8e-17 93.6 194 40.7
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 2.3e-17 93.2 207 44.9
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 4.0e-17 92.4 175 46.3
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 6.8e-17 91.7 192 40.1
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 6.8e-17 91.7 149 49.7
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 9.8e-16 87.8 152 52.0
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 9.8e-16 87.8 202 39.1
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.7e-15 87.0 186 43.0
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 1.7e-15 87.0 209 40.2
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 2.2e-15 86.7 179 44.7
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 6.4e-15 85.1 210 41.4
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 6.4e-15 85.1 161 42.9
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 8.3e-15 84.7 204 40.7
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.4e-14 83.2 202 40.6
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 7.1e-14 81.6 152 46.7
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 2.7e-13 79.7 208 43.8
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 2.7e-13 79.7 174 43.1
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 1.3e-12 77.4 207 43.5
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.3e-12 77.4 197 43.1
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 2.3e-12 76.6 212 40.6
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 2.3e-12 76.6 212 40.6
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 2.3e-12 76.6 196 39.3
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 3.9e-12 75.9 197 41.6
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 1.1e-11 74.3 102 43.1
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 3.3e-11 72.8 76 50.0
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 4.3e-11 72.4 191 40.3
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 5.6e-11 72.0 195 38.5
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 1.2e-10 70.9 201 38.3
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.2e-10 70.9 199 40.7
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.6e-10 70.5 160 40.6
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 2.8e-10 69.7 207 39.1
CDE09G0901 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 3.6e-10 69.3 107 51.4
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 3.6e-10 69.3 181 36.5
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 8.1e-10 68.2 198 34.8
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 3.1e-09 66.2 120 50.0
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 4.0e-09 65.9 73 46.6
PSO170G2244 Papaver somniferum HOM05D007152 ORTHO05D008912 4.0e-09 65.9 158 44.3
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 6.8e-09 65.1 212 40.1
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 6.8e-09 65.1 191 38.7
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 8.9e-09 64.7 118 47.5
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 1.5e-08 63.9 62 53.2
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 2.0e-08 63.5 208 39.4
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 2.6e-08 63.2 153 41.8
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 2.6e-08 63.2 177 35.6
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 3.4e-08 62.8 208 41.3
ATR0693G346 Amborella trichopoda HOM05D007152 ORTHO05D008912 5.8e-08 62.0 152 41.4
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 5.8e-08 62.0 122 48.4
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 1.3e-07 60.8 195 34.9
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 2.2e-07 60.1 49 55.1
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 2.9e-07 59.7 178 34.8
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 3.2e-06 56.2 82 42.7


User provided reference genes

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