Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02831 Aquilegia oxysepala HOM05D007766 ORTHO05D009733 7.3e-125 450.7 244 100.0
Dinv33093 Davidia involucrata HOM05D007766 ORTHO05D009733 2.3e-38 163.3 250 42.8
Nitab4.5_0000116g0120 Nicotiana tabacum HOM05D007766 ORTHO05D009733 2.0e-34 150.2 222 43.7
Lj1C21T2 Lonicera japonica HOM05D007766 ORTHO05D009733 2.3e-33 146.7 240 41.2
PGSC0003DMG400031827 Solanum tuberosum HOM05D007766 ORTHO05D009733 2.9e-33 146.4 222 42.3
PSO478G3523 Papaver somniferum HOM05D007766 ORTHO05D009733 1.1e-32 144.4 224 42.4
Nn3g21607 Nelumbo nucifera HOM05D007766 ORTHO05D009733 1.9e-32 143.7 238 37.8
Sopen09g030400 Solanum pennellii HOM05D007766 ORTHO05D009733 1.9e-32 143.7 223 41.7
CANSAT25G3789 Cannabis sativa HOM05D007766 ORTHO05D009733 5.6e-32 142.1 247 38.9
Nitab4.5_0000803g0050 Nicotiana tabacum HOM05D007766 ORTHO05D009733 7.3e-32 141.7 209 43.5
Peaxi162Scf00001g00292 Petunia axillaris HOM05D007766 ORTHO05D009733 7.3e-32 141.7 212 44.3
PSO782G1382 Papaver somniferum HOM05D007766 ORTHO05D009733 1.2e-31 141.0 230 40.0
Haze_04998 Corylus avellana HOM05D007766 ORTHO05D009733 1.0e-30 137.9 244 36.9
RcHm_v2.0_Chr7g0241981 Rosa chinensis HOM05D007766 ORTHO05D009733 1.4e-30 137.5 226 42.9
Medtr7g109280 Medicago truncatula HOM05D007766 ORTHO05D009733 2.3e-30 136.7 223 40.4
ClCG09G005330 Citrullus lanatus HOM05D007766 ORTHO05D009733 5.2e-30 135.6 243 39.1
VMungo1383G0118 Vigna mungo HOM05D007766 ORTHO05D009733 6.8e-30 135.2 250 41.6
Glyma.19G214500 Glycine max HOM05D007766 ORTHO05D009733 8.9e-30 134.8 246 39.8
CiPaw.07G114200 Carya illinoinensis HOM05D007766 ORTHO05D009733 1.5e-29 134.0 244 38.9
Gohir.D12G131000 Gossypium hirsutum HOM05D007766 ORTHO05D009733 1.5e-29 134.0 202 40.6
Gorai.008G142300 Gossypium raimondii HOM05D007766 ORTHO05D009733 4.4e-29 132.5 202 40.6
Actinidia27601 Actinidia chinensis HOM05D007766 ORTHO05D009733 7.5e-29 131.7 210 39.5
Gohir.A12G127500 Gossypium hirsutum HOM05D007766 ORTHO05D009733 7.5e-29 131.7 204 42.2
TPR.G20299 Trifolium pratense HOM05D007766 ORTHO05D009733 9.8e-29 131.3 213 40.8
FAN18G0466 Fragaria x ananassa HOM05D007766 ORTHO05D009733 1.3e-28 131.0 219 44.3
FAN18G1064 Fragaria x ananassa HOM05D007766 ORTHO05D009733 1.3e-28 131.0 219 44.3
vmacro02422 Vaccinium macrocarpon HOM05D007766 ORTHO05D009733 1.3e-28 131.0 255 42.4
AL1G12070 Arabidopsis lyrata HOM05D007766 ORTHO05D009733 3.7e-28 129.4 247 36.8
PGR119G1997 Punica granatum HOM05D007766 ORTHO05D009733 6.4e-28 128.6 219 39.3
CsaV3_7G029750 Cucumis sativus L. HOM05D007766 ORTHO05D009733 1.1e-27 127.9 227 39.2
MD03G1298400 Malus domestica HOM05D007766 ORTHO05D009733 1.1e-27 127.9 240 43.3
Migut.D00109 Erythranthe guttata HOM05D007766 ORTHO05D009733 1.4e-27 127.5 240 38.3
Eucgr.H01072 Eucalyptus grandis HOM05D007766 ORTHO05D009733 1.4e-27 127.5 220 38.2
Phvul.001G211300 Phaseolus vulgaris HOM05D007766 ORTHO05D009733 1.4e-27 127.5 256 41.0
Thecc.01G308600 Theobroma cacao HOM05D007766 ORTHO05D009733 1.9e-27 127.1 208 38.0
Psat3g020680 Pisum sativum HOM05D007766 ORTHO05D009733 3.2e-27 126.3 231 38.1
Carub.0001s0178 Capsella rubella HOM05D007766 ORTHO05D009733 5.4e-27 125.6 244 43.0
AT1G02700 Arabidopsis thaliana HOM05D007766 ORTHO05D009733 7.0e-27 125.2 247 38.5
FAN08G1563 Fragaria x ananassa HOM05D007766 ORTHO05D009733 7.0e-27 125.2 216 43.1
Cc01_g21240 Coffea canephora HOM05D007766 ORTHO05D009733 1.6e-26 124.0 254 37.4
FvH4_5g39680 Fragaria vesca HOM05D007766 ORTHO05D009733 3.5e-26 122.9 215 42.8
TWI36G1235 Tripterygium wilfordii HOM05D007766 ORTHO05D009733 3.5e-26 122.9 247 37.2
COL.COLO4_23278 Corchorus olitorius HOM05D007766 ORTHO05D009733 4.6e-26 122.5 198 42.4
GSVIVG01028075001 Vitis vinifera HOM05D007766 ORTHO05D009733 7.8e-26 121.7 245 37.6
Prupe.8G268800 Prunus persica HOM05D007766 ORTHO05D009733 1.0e-25 121.3 234 38.9
BraA10t42417Z Brassica rapa HOM05D000768 ORTHO05D000665 1.3e-25 120.9 243 42.0
CARHR002000 Cardamine hirsuta HOM05D007766 ORTHO05D009733 1.7e-25 120.6 244 38.5
MELO3C015946.2 Cucumis melo HOM05D007766 ORTHO05D009733 1.7e-25 120.6 259 40.5
CSS0041323 Camellia sinensis var. sinensis HOM05D007766 ORTHO05D009733 2.3e-25 120.2 188 39.9
Lj1g0002879 Lotus japonicus HOM05D007766 ORTHO05D009733 3.0e-25 119.8 253 37.5
QL12p028831 Quercus lobata HOM05D007766 ORTHO05D009733 3.0e-25 119.8 179 40.8
Ca_09199_v3 Cicer arietinum L. HOM05D007766 ORTHO05D009733 5.0e-25 119.0 209 37.3
SGA_v2.0_scaffold334G49048 Striga asiatica HOM05D007766 ORTHO05D009733 1.1e-24 117.9 238 37.0
arahy.Tifrunner.gnm1.ann1.MEA9U7 Arachis hypogaea HOM05D007766 ORTHO05D009733 1.5e-24 117.5 246 37.8
Atru.chr5.1065 Acer truncatum HOM05D007766 ORTHO05D009733 1.9e-24 117.1 248 36.3
BolC5t28921H Brassica oleracea HOM05D000768 ORTHO05D000665 1.9e-24 117.1 243 41.6
Lalb_Chr15g0078421 Lupinus albus HOM05D007766 ORTHO05D009733 3.3e-24 116.3 166 42.2
MBI18_g25084_MAGBIO Magnolia biondii HOM05D007766 ORTHO05D009733 3.3e-24 116.3 199 40.7
C05p01390 Brassica napus HOM05D000768 ORTHO05D000665 4.3e-24 115.9 240 42.9
Manes.05G001200 Manihot esculenta HOM05D007766 ORTHO05D009733 4.3e-24 115.9 244 36.5
Rhsim13G0007300 Rhododendron simsii HOM05D007766 ORTHO05D009733 5.6e-24 115.5 185 40.5
arahy.Tifrunner.gnm1.ann1.28FBJ8 Arachis hypogaea HOM05D007766 ORTHO05D009733 9.5e-24 114.8 217 39.2
Cfa005851 Carpinus fangiana HOM05D007766 ORTHO05D009733 2.8e-23 113.2 247 39.3
Cpa.g.sc151.50 Carica papaya HOM05D007766 ORTHO05D009733 4.7e-23 112.5 241 37.8
Lsat_1_v5_gn_5_190141 Lactuca sativa HOM05D007766 ORTHO05D009733 4.7e-23 112.5 247 34.8
Aa31LG1G9860 Aethionema arabicum HOM05D007766 ORTHO05D009733 8.0e-23 111.7 246 35.8
Potri.014G124500 Populus trichocarpa HOM05D007766 ORTHO05D009733 8.0e-23 111.7 246 35.8
Sc17g0002970 Simmondsia chinensis HOM05D007766 ORTHO05D009733 1.1e-22 111.3 214 38.8
ECA248G3735 Erigeron canadensis HOM05D007766 ORTHO05D009733 2.3e-22 110.2 208 35.6
Duzib138G0131 Durio zibethinus HOM05D007766 ORTHO05D009733 5.2e-22 109.0 213 36.2
Sed0007654 Sechium edule HOM05D007766 ORTHO05D009733 6.8e-22 108.6 212 36.8
Ah.15g092870 Amaranthus hybridus HOM05D007766 ORTHO05D009733 7.5e-21 105.1 154 44.2
EL10Ac7g17611 Beta vulgaris HOM05D007766 ORTHO05D009733 9.8e-21 104.8 218 36.2
DCAR_002867 Daucus carota HOM05D007766 ORTHO05D009733 1.3e-20 104.4 218 40.4
Sabra14G0092600 Salix brachista HOM05D007766 ORTHO05D009733 1.3e-20 104.4 243 33.7
Thhalv10008633m.g Eutrema salsugineum HOM05D007766 ORTHO05D009733 2.2e-20 103.6 242 38.0
TAR636G1646 Trochodendron aralioides HOM05D007766 ORTHO05D009733 2.9e-20 103.2 113 50.4
HanXRQChr01g0000891 Helianthus annuus HOM05D007766 ORTHO05D009733 8.3e-20 101.7 221 33.5
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 1.4e-19 100.9 243 35.4
Ciclev10024028m.g Citrus clementina HOM05D007766 ORTHO05D009733 2.4e-19 100.1 144 45.1
A10p01420 Brassica napus HOM05D000768 ORTHO05D000665 3.5e-18 96.3 217 40.1
CDE05G0244 Ceratophyllum demersum HOM05D007766 ORTHO05D009733 9.5e-16 88.2 142 39.4
unitig_60.g25659 Utricularia gibba HOM05D001839 ORTHO05D001867 3.4e-13 79.7 135 38.5
Zm00001eb330520 Zea mays HOM05D007766 ORTHO05D009733 1.6e-10 70.9 219 28.3
Solyc09g075600.3 Solanum lycopersicum HOM05D007766 ORTHO05D009733 3.0e-09 66.6 84 46.4
ATR0693G104 Amborella trichopoda HOM05D007766 ORTHO05D009733 1.1e-06 58.2 85 40.0
AUR62008743 Chenopodium quinoa HOM05D007766 ORTHO05D009733 5.2e-06 55.8 133 33.1


User provided reference genes

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