Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 9.7e-92 340.1 170 100.0
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.2e-54 216.9 167 64.1
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 6.4e-51 204.5 168 61.3
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 1.1e-50 203.8 169 60.4
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 1.1e-50 203.8 170 60.0
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 2.0e-49 199.5 169 59.8
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 1.0e-48 197.2 168 58.9
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 2.1e-46 189.5 166 56.0
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 6.8e-45 184.5 163 57.7
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.2e-44 183.7 156 57.7
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 2.2e-43 179.5 165 59.4
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 6.4e-43 177.9 164 56.7
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 4.1e-42 175.3 165 53.9
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 2.0e-41 172.9 150 60.7
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 2.0e-41 172.9 162 54.9
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.0e-40 170.6 156 53.8
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 1.3e-40 170.2 154 55.2
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.3e-40 170.2 167 52.7
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 6.6e-40 167.9 163 54.0
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.1e-39 167.2 162 53.1
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.9e-39 166.4 164 51.8
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.9e-39 166.4 147 60.5
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 2.5e-39 166.0 159 54.1
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 2.5e-39 166.0 186 48.4
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 3.3e-39 165.6 164 51.8
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 3.3e-39 165.6 166 53.0
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 5.6e-39 164.9 167 50.9
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 5.6e-39 164.9 172 51.7
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 9.5e-39 164.1 157 54.1
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 9.5e-39 164.1 159 54.7
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 1.6e-38 163.3 164 50.6
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 2.1e-38 162.9 154 56.5
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 4.7e-38 161.8 153 51.0
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 6.2e-38 161.4 164 50.6
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 6.2e-38 161.4 166 52.4
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 8.1e-38 161.0 151 55.0
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 8.1e-38 161.0 168 51.2
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 8.1e-38 161.0 147 59.2
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 1.1e-37 160.6 161 49.7
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 1.1e-37 160.6 166 53.0
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 1.4e-37 160.2 162 54.9
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 3.1e-37 159.1 163 51.5
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 3.1e-37 159.1 150 54.0
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 4.0e-37 158.7 151 51.0
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 4.0e-37 158.7 160 54.4
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 6.8e-37 157.9 160 52.5
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.2e-36 157.1 187 47.1
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 1.5e-36 156.8 115 66.1
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 2.0e-36 156.4 151 53.6
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 2.0e-36 156.4 151 53.6
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 3.4e-36 155.6 151 53.6
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 5.8e-36 154.8 166 52.4
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 7.5e-36 154.5 162 49.4
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.3e-35 153.7 180 50.0
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.7e-35 153.3 166 51.2
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 4.9e-35 151.8 164 50.0
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 8.3e-35 151.0 164 50.0
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 1.1e-34 150.6 159 47.8
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 1.1e-34 150.6 159 47.8
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.4e-34 149.4 175 49.1
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 4.1e-34 148.7 121 61.2
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 7.1e-34 147.9 115 67.0
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 9.2e-34 147.5 156 51.3
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 3.5e-33 145.6 117 65.0
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 3.0e-32 142.5 132 56.1
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.0e-32 142.5 123 59.3
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 7.3e-31 137.9 135 51.1
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 2.1e-30 136.3 152 46.7
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.1e-29 134.0 159 45.3
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 4.0e-29 132.1 94 70.2
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 3.4e-28 129.0 164 42.1
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 7.6e-28 127.9 148 45.3
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 4.9e-27 125.2 155 46.5
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 2.4e-26 122.9 151 50.3
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.3e-24 117.1 162 37.0
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.3e-24 117.1 162 37.7
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.3e-24 116.3 165 41.2
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.5e-23 112.8 162 35.8
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 4.3e-23 112.1 121 50.4
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 8.1e-22 107.8 126 46.8
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 1.8e-21 106.7 96 47.9
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.7e-16 90.1 99 50.5
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 1.1e-15 87.4 62 64.5
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 4.2e-10 68.9 155 31.6
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.1e-06 56.6 87 37.9


User provided reference genes

Program Settings