Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02711 Aquilegia oxysepala HOM05D003558 ORTHO05D004392 4.3e-59 231.1 116 100.0
Aqoxy2G02732 Aquilegia oxysepala HOM05D003558 ORTHO05D004392 2.2e-55 218.8 116 94.8
Nn2g12717 Nelumbo nucifera HOM05D003558 ORTHO05D004392 7.4e-51 203.8 116 86.2
TAR375G0349 Trochodendron aralioides HOM05D003558 ORTHO05D004392 1.3e-50 203.0 116 85.3
PSO170G3792 Papaver somniferum HOM05D003558 ORTHO05D004392 2.8e-50 201.8 116 83.6
PSO017G6909 Papaver somniferum HOM05D003558 ORTHO05D004392 8.2e-50 200.3 116 82.8
Psat6g019440 Pisum sativum HOM05D003558 ORTHO05D004392 8.2e-50 200.3 116 84.5
TAR425G0004 Trochodendron aralioides HOM05D003558 ORTHO05D004392 1.1e-49 199.9 116 83.6
TAR374G0657 Trochodendron aralioides HOM05D003558 ORTHO05D004392 1.4e-49 199.5 116 83.6
Psat0s889g0080 Pisum sativum HOM05D003558 ORTHO05D004392 2.4e-49 198.7 116 83.6
Psat7g261400 Pisum sativum HOM05D003558 ORTHO05D004392 2.4e-49 198.7 116 83.6
Glyma.05G127300 Glycine max HOM05D003558 ORTHO05D004392 3.1e-49 198.4 116 84.5
arahy.Tifrunner.gnm1.ann1.HE7D3F Arachis hypogaea HOM05D003558 ORTHO05D004392 6.9e-49 197.2 116 82.8
arahy.Tifrunner.gnm1.ann1.R1RJVJ Arachis hypogaea HOM05D003558 ORTHO05D004392 6.9e-49 197.2 116 82.8
MELO3C016262.2 Cucumis melo HOM05D003558 ORTHO05D004392 6.9e-49 197.2 116 82.8
TPR.G13178 Trifolium pratense HOM05D003558 ORTHO05D004392 6.9e-49 197.2 116 82.8
GSVIVG01019594001 Vitis vinifera HOM05D003558 ORTHO05D004392 6.9e-49 197.2 116 83.6
Medtr1g016750 Medicago truncatula HOM05D003558 ORTHO05D004392 1.2e-48 196.4 116 81.9
Gohir.1Z049372 Gossypium hirsutum HOM05D003558 ORTHO05D004392 1.5e-48 196.1 116 81.9
Gohir.A08G223500 Gossypium hirsutum HOM05D003558 ORTHO05D004392 1.5e-48 196.1 116 81.9
Gorai.004G260100 Gossypium raimondii HOM05D003558 ORTHO05D004392 1.5e-48 196.1 116 81.9
Phvul.002G197600 Phaseolus vulgaris HOM05D003558 ORTHO05D004392 1.5e-48 196.1 116 83.6
Duzib177G1044 Durio zibethinus HOM05D003558 ORTHO05D004392 2.0e-48 195.7 116 82.8
Glyma.08G082000 Glycine max HOM05D003558 ORTHO05D004392 2.0e-48 195.7 116 83.6
ATR0602G090 Amborella trichopoda HOM05D003558 ORTHO05D004392 2.6e-48 195.3 116 81.9
Lj4g0003124 Lotus japonicus HOM05D003558 ORTHO05D004392 2.6e-48 195.3 116 82.8
VMungo0251G1601 Vigna mungo HOM05D003558 ORTHO05D004392 3.4e-48 194.9 116 82.8
Dinv37501 Davidia involucrata HOM05D003558 ORTHO05D004392 4.5e-48 194.5 116 81.9
Duzib106G0520 Durio zibethinus HOM05D003558 ORTHO05D004392 4.5e-48 194.5 116 81.9
MSTRG.1797 Avicennia marina HOM05D003558 ORTHO05D004392 5.9e-48 194.1 116 81.9
Dinv38812 Davidia involucrata HOM05D003558 ORTHO05D004392 5.9e-48 194.1 116 81.9
Lj8A204G66 Lonicera japonica HOM05D003558 ORTHO05D004392 5.9e-48 194.1 116 82.8
ClCG07G011380 Citrullus lanatus HOM05D003558 ORTHO05D004392 7.7e-48 193.7 116 81.0
Duzib128G1157 Durio zibethinus HOM05D003558 ORTHO05D004392 1.0e-47 193.4 116 81.9
Lalb_Chr07g0188951 Lupinus albus HOM05D003558 ORTHO05D004392 1.3e-47 193.0 116 81.9
Thecc.05G207600 Theobroma cacao HOM05D003558 ORTHO05D004392 1.3e-47 193.0 116 81.0
Eucgr.E00889 Eucalyptus grandis HOM05D003558 ORTHO05D004392 1.7e-47 192.6 116 81.9
Nn1g00283 Nelumbo nucifera HOM05D003558 ORTHO05D004392 2.2e-47 192.2 116 81.0
HPP92_006339 Vanilla planifolia HOM05D003558 ORTHO05D004392 2.2e-47 192.2 116 81.0
Zm00001eb121180 Zea mays HOM05D003558 ORTHO05D004392 2.2e-47 192.2 116 81.0
CsaV3_4G006830 Cucumis sativus L. HOM05D003558 ORTHO05D004392 2.9e-47 191.8 116 81.0
CSS0024989 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.8e-47 191.4 116 81.0
CiPaw.11G117400 Carya illinoinensis HOM05D003558 ORTHO05D004392 3.8e-47 191.4 116 80.2
CANSAT21G2039 Cannabis sativa HOM05D003558 ORTHO05D004392 5.0e-47 191.0 116 81.0
Cc08_g16370 Coffea canephora HOM05D003558 ORTHO05D004392 5.0e-47 191.0 116 80.2
CSS0022214 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 6.5e-47 190.7 116 80.2
ECA246G0145 Erigeron canadensis HOM05D003558 ORTHO05D004392 6.5e-47 190.7 116 79.3
HPP92_027865 Vanilla planifolia HOM05D003558 ORTHO05D004392 6.5e-47 190.7 116 80.2
CSS0001609 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 8.5e-47 190.3 116 79.3
Sed0010282 Sechium edule HOM05D003558 ORTHO05D004392 8.5e-47 190.3 116 78.4
Atru.chr9.1940 Acer truncatum HOM05D003558 ORTHO05D004392 1.1e-46 189.9 116 79.3
HanXRQChr15g0472881 Helianthus annuus HOM05D003558 ORTHO05D004392 1.1e-46 189.9 116 78.4
Lsat_1_v5_gn_3_12881 Lactuca sativa HOM05D003558 ORTHO05D004392 1.1e-46 189.9 116 79.3
SalBow8G5190 Salvia bowleyana HOM05D003558 ORTHO05D004392 1.1e-46 189.9 116 79.3
SEGI_23551 Sequoiadendron giganteum HOM05D003558 ORTHO05D004392 1.1e-46 189.9 116 79.3
TWI60G0493 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 1.1e-46 189.9 116 80.2
vmacro21480 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 1.1e-46 189.9 116 80.2
Lalb_Chr12g0208821 Lupinus albus HOM05D003558 ORTHO05D004392 1.4e-46 189.5 116 81.0
Sc01g0010420 Simmondsia chinensis HOM05D003558 ORTHO05D004392 1.4e-46 189.5 116 80.2
Manes.01G045195 Manihot esculenta HOM05D003558 ORTHO05D004392 2.5e-46 188.7 116 80.2
Zm00001eb413880 Zea mays HOM05D003558 ORTHO05D004392 2.5e-46 188.7 116 80.2
CSS0031875 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.2e-46 188.3 116 79.3
CiPaw.12G080800 Carya illinoinensis HOM05D003558 ORTHO05D004392 4.2e-46 188.0 120 79.2
Oeu055020.1 Olea europaea HOM05D003558 ORTHO05D004392 4.2e-46 188.0 116 79.3
Ciclev10021697m.g Citrus clementina HOM05D003558 ORTHO05D004392 5.5e-46 187.6 116 77.6
SGA_v2.0_scaffold111G31394 Striga asiatica HOM05D003558 ORTHO05D004392 5.5e-46 187.6 116 78.4
TWI81G0268 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 5.5e-46 187.6 116 77.6
MD14G1132800 Malus domestica HOM05D003558 ORTHO05D004392 7.2e-46 187.2 116 76.7
Manes.02G006900 Manihot esculenta HOM05D003558 ORTHO05D004392 7.2e-46 187.2 116 79.3
PGR042G0055 Punica granatum HOM05D003558 ORTHO05D004392 7.2e-46 187.2 116 79.3
AUR62019874 Chenopodium quinoa HOM05D003558 ORTHO05D004392 1.2e-45 186.4 116 78.4
Prupe.5G124300 Prunus persica HOM05D003558 ORTHO05D004392 1.2e-45 186.4 116 76.7
Actinidia22742 Actinidia chinensis HOM05D003558 ORTHO05D004392 1.6e-45 186.0 114 78.9
MD06G1111600 Malus domestica HOM05D003558 ORTHO05D004392 1.6e-45 186.0 116 77.6
CSS0014298 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.1e-45 185.7 116 78.4
Carub.0002s0023 Capsella rubella HOM05D003558 ORTHO05D004392 2.1e-45 185.7 116 76.7
Cpa.g.sc79.5 Carica papaya HOM05D003558 ORTHO05D004392 2.1e-45 185.7 116 76.7
AUR62007010 Chenopodium quinoa HOM05D003558 ORTHO05D004392 2.7e-45 185.3 116 77.6
Thhalv10023640m.g Eutrema salsugineum HOM05D003558 ORTHO05D004392 2.7e-45 185.3 116 76.7
Os07g0435100 Oryza sativa ssp. japonica HOM05D003558 ORTHO05D004392 2.7e-45 185.3 116 75.9
QL05p030756 Quercus lobata HOM05D003558 ORTHO05D004392 2.7e-45 185.3 115 77.4
Sed0022053 Sechium edule HOM05D003558 ORTHO05D004392 2.7e-45 185.3 116 77.6
THA.LOC104817564 Tarenaya hassleriana HOM05D003558 ORTHO05D004392 2.7e-45 185.3 116 76.7
AL2G10280 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 4.6e-45 184.5 116 76.7
COL.COLO4_23475 Corchorus olitorius HOM05D003558 ORTHO05D004392 4.6e-45 184.5 132 71.2
RcHm_v2.0_Chr7g0186141 Rosa chinensis HOM05D003558 ORTHO05D004392 4.6e-45 184.5 116 76.7
AT1G64520 Arabidopsis thaliana HOM05D003558 ORTHO05D004392 6.1e-45 184.1 116 75.9
MSTRG.13893 Avicennia marina HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 79.3
BcaB07g31471 Brassica carinata HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
BcaB07g31496 Brassica carinata HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
BcaC04g22576 Brassica carinata HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
BcaC04g22613 Brassica carinata HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
A09p14400 Brassica napus HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
A09p14640 Brassica napus HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
C09p17320 Brassica napus HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
C09p17720 Brassica napus HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
BolC9t54634H Brassica oleracea HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
BolC9t54666H Brassica oleracea HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
BraA09t37087Z Brassica rapa HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
BraA09t37110Z Brassica rapa HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 75.9
Oeu041397.1 Olea europaea HOM05D003558 ORTHO05D004392 7.9e-45 183.7 116 77.6
QL02p029625 Quercus lobata HOM05D003558 ORTHO05D004392 7.9e-45 183.7 115 76.5
Potri.003G142700 Populus trichocarpa HOM05D003558 ORTHO05D004392 1.4e-44 183.0 116 77.6
AL7G47120 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 1.8e-44 182.6 116 75.0
Sp2g00230 Schrenkiella parvula HOM05D003558 ORTHO05D004392 1.8e-44 182.6 116 75.0
COL.COLO4_08911 Corchorus olitorius HOM05D003558 ORTHO05D004392 2.3e-44 182.2 138 68.1
FAN04G1402 Fragaria x ananassa HOM05D003558 ORTHO05D004392 2.3e-44 182.2 116 74.1
Oeu009980.1 Olea europaea HOM05D003558 ORTHO05D004392 2.3e-44 182.2 116 75.9
CARHR046430 Cardamine hirsuta HOM05D003558 ORTHO05D004392 3.0e-44 181.8 116 75.0
Aa31LG2G1510 Aethionema arabicum HOM05D003558 ORTHO05D004392 3.9e-44 181.4 116 75.0
THA.LOC104809321 Tarenaya hassleriana HOM05D003558 ORTHO05D004392 3.9e-44 181.4 116 75.9
FAN08G1805 Fragaria x ananassa HOM05D003558 ORTHO05D004392 5.1e-44 181.0 116 73.3
FvH4_5g11650 Fragaria vesca HOM05D003558 ORTHO05D004392 6.7e-44 180.6 116 73.3
FAN13G2808 Fragaria x ananassa HOM05D003558 ORTHO05D004392 6.7e-44 180.6 116 73.3
FAN18G4304 Fragaria x ananassa HOM05D003558 ORTHO05D004392 6.7e-44 180.6 116 73.3
Sp7g00080 Schrenkiella parvula HOM05D003558 ORTHO05D004392 1.1e-43 179.9 116 72.4
Nitab4.5_0002793g0010 Nicotiana tabacum HOM05D003558 ORTHO05D004392 2.0e-43 179.1 116 75.9
FAN18G4084 Fragaria x ananassa HOM05D003558 ORTHO05D004392 2.5e-43 178.7 114 72.8
Glyma.03G059800 Glycine max HOM05D000140 ORTHO05D004392 2.5e-43 178.7 108 79.6
Mapoly0071s0017 Marchantia polymorpha HOM05D003558 ORTHO05D004392 2.5e-43 178.7 116 73.3
EL10Ac5g12950 Beta vulgaris HOM05D003558 ORTHO05D004392 3.3e-43 178.3 116 75.9
Lj3g0002122 Lotus japonicus HOM05D003558 ORTHO05D004392 3.3e-43 178.3 116 77.6
Nitab4.5_0000357g0410 Nicotiana tabacum HOM05D003558 ORTHO05D004392 3.3e-43 178.3 116 75.9
Hund11374 Selenicereus undatus HOM05D003558 ORTHO05D004392 3.3e-43 178.3 116 75.0
AT5G42040 Arabidopsis thaliana HOM05D003558 ORTHO05D004392 7.4e-43 177.2 116 72.4
Nitab4.5_0002367g0050 Nicotiana tabacum HOM05D003558 ORTHO05D004392 7.4e-43 177.2 116 75.0
HanXRQChr14g0460421 Helianthus annuus HOM05D003558 ORTHO05D004392 1.7e-42 176.0 117 74.4
Solyc08g082700.3 Solanum lycopersicum HOM05D003558 ORTHO05D004392 2.2e-42 175.6 116 73.3
Sopen08g030930 Solanum pennellii HOM05D003558 ORTHO05D004392 2.2e-42 175.6 116 73.3
Migut.A00609 Erythranthe guttata HOM05D003558 ORTHO05D004392 2.8e-42 175.3 116 74.1
Potri.001G088200 Populus trichocarpa HOM05D003558 ORTHO05D004392 4.8e-42 174.5 116 75.0
Pp3c14_17630 Physcomitrium patens HOM05D003558 ORTHO05D004392 6.3e-42 174.1 116 72.4
Sabra03G0103300 Salix brachista HOM05D003558 ORTHO05D004392 6.3e-42 174.1 116 74.1
PGSC0003DMG400012259 Solanum tuberosum HOM05D003558 ORTHO05D004392 6.3e-42 174.1 116 73.3
Ah.12g052830 Amaranthus hybridus HOM05D003558 ORTHO05D004392 1.1e-41 173.3 116 72.4
Pp3c17_21360 Physcomitrium patens HOM05D003558 ORTHO05D004392 1.1e-41 173.3 116 72.4
CAN.G567.30 Capsicum annuum HOM05D003558 ORTHO05D004392 2.4e-41 172.2 116 72.4
AagrBONN_evm.TU.Sc2ySwM_228.783 Anthoceros agrestis HOM05D003558 ORTHO05D004392 1.5e-40 169.5 116 69.8
Hma1.2p1_0440F.1_g153570 Hydrangea macrophylla HOM05D003558 ORTHO05D004392 3.4e-40 168.3 164 56.7
DCAR_026273 Daucus carota HOM05D003558 ORTHO05D004392 4.5e-40 167.9 166 57.8
Sabra01G0064500 Salix brachista HOM05D003558 ORTHO05D004392 3.8e-39 164.9 126 68.3
CSS0017714 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.4e-38 162.9 105 75.2
CSS0013121 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.2e-37 159.8 107 72.0
Eucgr.E00914 Eucalyptus grandis HOM05D003558 ORTHO05D004392 3.0e-36 155.2 110 70.9
SMO196G0279 Selaginella moellendorffii HOM05D003558 ORTHO05D004392 6.7e-36 154.1 116 64.7
COL.COLO4_35445 Corchorus olitorius HOM05D003558 ORTHO05D004392 3.7e-34 148.3 116 66.4
Eucgr.E00934 Eucalyptus grandis HOM05D003558 ORTHO05D004392 1.2e-32 143.3 102 69.6
Peaxi162Scf00117g00921 Petunia axillaris HOM05D003558 ORTHO05D004392 1.2e-32 143.3 115 67.0
CBR_g36847 Chara braunii HOM05D003558 ORTHO05D004392 1.9e-30 136.0 116 54.3
Peaxi162Scf00074g00546 Petunia axillaris HOM05D003558 ORTHO05D004392 7.7e-24 114.0 116 55.2
Eucgr.E00681 Eucalyptus grandis HOM05D003558 ORTHO05D004392 3.8e-23 111.7 108 59.3
Eucgr.E00943 Eucalyptus grandis HOM05D003558 ORTHO05D004392 3.8e-23 111.7 116 54.3
Nitab4.5_0003266g0030 Nicotiana tabacum HOM05D003558 ORTHO05D004392 3.8e-23 111.7 114 54.4
vmacro13883 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 8.5e-23 110.5 73 74.0
Actinidia22185 Actinidia chinensis HOM05D003558 ORTHO05D005715 3.2e-22 108.6 73 71.2
Eucgr.E00961 Eucalyptus grandis HOM05D003558 ORTHO05D004392 1.0e-20 103.6 66 77.3
Aa31LG9G160 Aethionema arabicum HOM05D003558 ORTHO05D004392 3.4e-19 98.6 90 56.7
PRCOL_00000075 Prasinoderma coloniale HOM05D003558 ORTHO05D004392 6.3e-18 94.4 116 44.8
CSS0011636 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.0e-15 87.0 48 83.3
CSS0044790 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.0e-15 87.0 48 83.3
CSS0010814 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.9e-15 85.5 63 69.8
Cre17.g708300 Chlamydomonas reinhardtii HOM05D003558 ORTHO05D004392 6.5e-15 84.3 118 39.8
CSS0039205 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.9e-14 82.8 48 81.2
MCO10G293 Micromonas commoda HOM05D003558 ORTHO05D004392 3.2e-14 82.0 116 39.7
CSS0013431 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.7e-13 79.0 48 83.3
Nitab4.5_0007285g0050 Nicotiana tabacum HOM05D003558 ORTHO05D004392 4.0e-12 75.1 99 44.4
CSS0022413 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.0e-11 72.8 38 84.2
Eucgr.E00976 Eucalyptus grandis HOM05D003558 ORTHO05D045319 4.4e-11 71.6 48 70.8
Eucgr.E00716 Eucalyptus grandis HOM05D003558 ORTHO05D045319 2.2e-10 69.3 47 68.1
RcHm_v2.0_Chr2g0138681 Rosa chinensis HOM05D003558 ORTHO05D004392 2.2e-10 69.3 115 39.1
Eucgr.E00909 Eucalyptus grandis HOM05D003558 ORTHO05D191499 3.7e-10 68.6 52 61.5
FvH4_6g31620 Fragaria vesca HOM05D003558 ORTHO05D004392 6.3e-10 67.8 117 41.0
Ca_18846_v3 Cicer arietinum L. HOM05D003558 ORTHO05D004392 1.2e-08 63.5 37 75.7
Ca_13177_v3 Cicer arietinum L. HOM05D003558 ORTHO05D004392 2.0e-08 62.8 32 84.4
DCAR_006513 Daucus carota HOM05D003558 ORTHO05D004392 1.0e-07 60.5 31 87.1
Cfa011973 Carpinus fangiana HOM05D003558 ORTHO05D004392 1.7e-07 59.7 32 84.4
Haze_09103 Corylus avellana HOM05D003558 ORTHO05D004392 3.8e-07 58.5 31 87.1
CSS0000450 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 8.6e-07 57.4 31 87.1
FAN09G0436 Fragaria x ananassa HOM05D003558 ORTHO05D004392 5.5e-06 54.7 117 36.8


User provided reference genes

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