Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 1.0e-182 643.3 327 100.0
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.8e-132 475.7 349 69.9
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 4.8e-132 474.9 349 69.6
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 4.8e-132 474.9 327 71.6
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.4e-131 473.4 330 72.1
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 2.4e-131 472.6 349 69.1
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.5e-130 468.4 329 73.3
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 7.7e-130 467.6 325 71.4
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-129 465.7 329 72.9
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.2e-127 460.3 327 70.9
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-127 460.3 329 72.0
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 4.7e-127 458.4 336 67.3
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 1.4e-126 456.8 333 68.2
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 1.8e-126 456.4 331 70.7
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 2.3e-126 456.1 331 70.4
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 1.5e-125 453.4 329 70.2
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 2.0e-125 453.0 333 67.0
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 7.5e-125 451.1 331 69.8
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 1.3e-124 450.3 322 70.8
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.7e-124 449.9 329 70.8
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 3.7e-124 448.7 326 69.3
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 6.3e-124 448.0 341 66.0
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 6.3e-124 448.0 331 68.9
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.1e-123 447.2 327 69.4
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.4e-123 446.0 326 69.0
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.6e-122 443.4 329 69.3
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 2.3e-121 439.5 336 66.4
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 2.1e-119 433.0 328 67.1
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 6.1e-119 431.4 335 64.5
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 8.0e-119 431.0 337 64.1
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 8.0e-119 431.0 324 68.2
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 1.0e-118 430.6 332 66.9
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 2.3e-118 429.5 338 67.2
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 3.1e-118 429.1 333 66.1
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.0e-117 426.4 332 66.0
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 2.6e-117 426.0 328 66.5
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 4.9e-116 421.8 343 64.7
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 8.3e-116 421.0 296 72.6
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.1e-115 420.6 313 66.8
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.9e-115 419.9 327 67.0
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 1.6e-114 416.8 331 63.4
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.0e-114 416.4 328 67.1
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 2.0e-114 416.4 334 64.7
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 4.6e-114 415.2 332 63.3
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 4.6e-114 415.2 332 63.3
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 2.3e-113 412.9 310 70.0
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.1e-112 410.6 341 63.6
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.9e-112 409.8 332 63.0
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 1.6e-111 406.8 333 61.3
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 8.0e-111 404.4 331 61.0
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 6.8e-110 401.4 331 61.6
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 4.4e-109 398.7 323 62.2
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 7.5e-109 397.9 340 61.8
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 9.8e-109 397.5 327 64.2
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.2e-107 392.5 317 62.8
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 3.9e-105 385.6 303 64.7
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 6.6e-105 384.8 377 54.6
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 9.5e-104 380.9 303 64.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 9.5e-104 380.9 306 63.4
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.2e-103 380.6 299 64.5
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 1.1e-102 377.5 337 58.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.4e-102 377.1 303 63.0
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 8.9e-102 374.4 328 58.2
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 2.6e-101 372.9 329 57.8
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 7.5e-101 371.3 342 58.2
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.9e-99 366.7 365 56.2
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 2.4e-99 366.3 328 61.3
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.2e-98 364.0 333 57.7
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-98 363.2 326 61.0
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 1.7e-97 360.1 282 66.3
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 9.6e-96 354.4 332 56.6
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 3.1e-94 349.4 280 62.9
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 6.8e-94 348.2 298 60.1
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 3.8e-92 342.4 327 56.6
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 1.9e-91 340.1 283 60.1
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 2.4e-91 339.7 231 71.0
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.3e-89 334.0 342 52.6
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.3e-87 327.4 219 73.1
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.4e-86 323.2 281 63.0
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 3.1e-86 322.8 305 55.4
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 5.8e-85 318.5 218 70.2
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 6.0e-82 308.5 327 49.8
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.6e-79 300.4 335 51.6
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-78 297.0 325 52.6
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.9e-78 295.0 328 53.7
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.4e-77 292.7 329 55.9
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.9e-76 288.9 329 53.2
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.4e-76 288.5 222 67.6
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 8.4e-76 288.1 223 64.1
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 5.4e-75 285.4 328 50.9
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.0e-73 281.2 198 72.2
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 2.1e-66 256.9 281 50.9
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.9e-66 255.0 186 70.4
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.0e-65 254.6 181 69.6
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.5e-59 233.4 378 37.0
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.5e-53 214.2 181 61.9
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 8.5e-52 208.4 166 65.7
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 1.4e-49 201.1 181 54.7
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.1e-48 198.0 278 40.6
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 7.4e-48 195.3 292 38.4
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 4.8e-47 192.6 135 68.9
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 3.3e-40 169.9 298 38.3
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 4.7e-34 149.4 148 52.7
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 2.9e-28 130.2 246 35.8
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 8.0e-18 95.5 69 65.2
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 1.4e-17 94.7 101 55.4
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 5.2e-17 92.8 105 46.7
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 2.7e-13 80.5 69 59.4
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 8.6e-12 75.5 258 24.4
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 7.5e-08 62.4 41 65.9


User provided reference genes

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