Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 6.1e-73 277.3 134 100.0
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.7e-51 206.1 120 77.5
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 8.0e-49 197.2 118 76.3
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 1.7e-43 179.5 120 72.5
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 1.7e-43 179.5 127 68.5
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 8.6e-43 177.2 124 70.2
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.9e-42 176.0 120 70.8
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 1.9e-42 176.0 126 67.5
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 3.3e-42 175.3 117 66.7
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 3.3e-42 175.3 117 69.2
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 3.3e-42 175.3 119 72.3
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 4.2e-42 174.9 118 69.5
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 4.2e-42 174.9 117 69.2
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 4.2e-42 174.9 127 70.1
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 7.2e-42 174.1 117 67.5
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 7.2e-42 174.1 118 68.6
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 7.2e-42 174.1 118 68.6
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 7.2e-42 174.1 118 68.6
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 7.2e-42 174.1 126 66.7
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 9.5e-42 173.7 120 72.5
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 9.5e-42 173.7 125 67.2
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 1.6e-41 172.9 130 67.7
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 2.1e-41 172.6 117 67.5
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 2.1e-41 172.6 126 67.5
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.8e-41 172.2 120 71.7
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 2.8e-41 172.2 120 68.3
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 2.8e-41 172.2 119 69.7
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 3.6e-41 171.8 120 70.8
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 4.7e-41 171.4 128 68.0
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 6.1e-41 171.0 120 70.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 6.1e-41 171.0 120 68.3
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 1.0e-40 170.2 120 68.3
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 1.4e-40 169.9 123 65.9
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.4e-40 169.9 118 65.3
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.8e-40 169.5 118 65.3
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 2.3e-40 169.1 120 70.8
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.3e-40 169.1 127 69.3
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 3.0e-40 168.7 128 66.4
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 5.2e-40 167.9 120 69.2
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 5.2e-40 167.9 120 69.2
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 6.8e-40 167.5 127 62.2
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 6.8e-40 167.5 122 66.4
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 1.2e-39 166.8 120 66.7
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 2.0e-39 166.0 119 68.1
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 2.0e-39 166.0 119 68.1
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 3.4e-39 165.2 120 68.3
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 5.7e-39 164.5 129 65.1
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 7.5e-39 164.1 120 67.5
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 7.5e-39 164.1 119 68.1
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 9.8e-39 163.7 117 63.2
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 9.8e-39 163.7 119 64.7
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.7e-38 162.9 120 69.2
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 2.2e-38 162.5 126 66.7
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 2.9e-38 162.2 118 62.7
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 2.9e-38 162.2 108 72.2
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 3.7e-38 161.8 123 65.9
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 3.7e-38 161.8 126 65.1
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 4.9e-38 161.4 119 68.1
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 8.3e-38 160.6 118 62.7
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 8.3e-38 160.6 118 65.3
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.1e-37 160.2 118 64.4
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.8e-37 159.5 125 64.8
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 2.4e-37 159.1 123 64.2
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 4.1e-37 158.3 120 65.8
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 5.4e-37 157.9 127 57.5
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 5.4e-37 157.9 120 65.0
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 2.0e-36 156.0 125 63.2
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 4.6e-36 154.8 120 65.0
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 5.9e-36 154.5 127 62.2
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 7.8e-36 154.1 127 62.2
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 2.9e-35 152.1 114 62.3
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 6.6e-35 151.0 129 57.4
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 1.9e-34 149.4 108 68.5
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 2.5e-34 149.1 108 68.5
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.6e-33 146.4 141 53.9
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 2.3e-32 142.5 101 70.3
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 3.1e-32 142.1 123 58.5
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 5.2e-32 141.4 126 58.7
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.0e-31 139.4 154 51.3
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 4.4e-31 138.3 119 59.7
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 4.4e-31 138.3 109 61.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.7e-28 129.0 126 50.0
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.9e-27 125.2 102 62.7
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 4.7e-25 118.2 115 49.6
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 4.0e-24 115.2 77 70.1
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 2.0e-23 112.8 78 70.5
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 7.5e-23 110.9 112 50.9
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.3e-22 110.2 83 66.3
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.2e-22 109.4 80 66.2
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.1e-21 107.1 111 48.6
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.9e-21 106.3 80 63.8
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 8.1e-17 90.9 62 71.0
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.7e-14 83.2 102 43.1
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.0e-11 73.9 91 44.0
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 6.2e-09 64.7 98 38.8


User provided reference genes

Program Settings