Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02610 Aquilegia oxysepala HOM05D003741 ORTHO05D004247 5.2e-53 210.7 99 100.0
Aqoxy2G02612 Aquilegia oxysepala HOM05D003741 ORTHO05D004247 3.4e-44 181.4 113 81.4
Atru.chr5.822 Acer truncatum HOM05D003741 ORTHO05D004247 1.0e-37 159.8 106 72.6
Duzib138G0796 Durio zibethinus HOM05D003741 ORTHO05D004247 5.2e-37 157.5 93 78.5
Nn4g25264 Nelumbo nucifera HOM05D003741 ORTHO05D004247 5.2e-37 157.5 111 73.0
ATR0796G236 Amborella trichopoda HOM05D003741 ORTHO05D004247 1.5e-36 156.0 109 68.8
Gohir.D11G107766 Gossypium hirsutum HOM05D003741 ORTHO05D004247 1.5e-36 156.0 105 72.4
Gorai.007G115600 Gossypium raimondii HOM05D003741 ORTHO05D004247 1.5e-36 156.0 105 72.4
MBI18_g38881_MAGBIO Magnolia biondii HOM05D003741 ORTHO05D004247 2.0e-36 155.6 105 75.2
Thecc.01G328700 Theobroma cacao HOM05D003741 ORTHO05D004247 2.6e-36 155.2 106 71.7
ClCG10G013270 Citrullus lanatus HOM05D003741 ORTHO05D004247 3.4e-36 154.8 88 83.0
Dinv03516 Davidia involucrata HOM05D003741 ORTHO05D004247 4.4e-36 154.5 113 68.1
Gohir.A11G103300 Gossypium hirsutum HOM05D003741 ORTHO05D004247 5.7e-36 154.1 105 71.4
Lju2566A1T38 Lonicera japonica HOM05D003741 ORTHO05D004247 7.5e-36 153.7 113 69.0
Glyma.19G223300 Glycine max HOM05D003741 ORTHO05D004247 9.8e-36 153.3 111 68.5
Ciclev10020859m.g Citrus clementina HOM05D003741 ORTHO05D004247 1.3e-35 152.9 113 67.3
QL01p026787 Quercus lobata HOM05D003741 ORTHO05D004247 1.3e-35 152.9 111 68.5
CiPaw.07G128200 Carya illinoinensis HOM05D003741 ORTHO05D004247 1.7e-35 152.5 113 69.0
Duzib133G0965 Durio zibethinus HOM05D003741 ORTHO05D004247 1.7e-35 152.5 106 70.8
THA.LOC104815908 Tarenaya hassleriana HOM05D003741 ORTHO05D004247 1.7e-35 152.5 113 68.1
Atru.chr5.823 Acer truncatum HOM05D003741 ORTHO05D004247 2.2e-35 152.1 106 67.9
Glyma.03G226300 Glycine max HOM05D003741 ORTHO05D004247 2.2e-35 152.1 111 68.5
Potri.002G184300 Populus trichocarpa HOM05D003741 ORTHO05D004247 2.2e-35 152.1 113 68.1
CsaV3_3G043370 Cucumis sativus L. HOM05D003741 ORTHO05D004247 2.8e-35 151.8 100 76.0
Eucgr.A00982 Eucalyptus grandis HOM05D003741 ORTHO05D004247 2.8e-35 151.8 111 67.6
PGR042G0131 Punica granatum HOM05D003741 ORTHO05D004247 2.8e-35 151.8 103 71.8
VMungo1383G0455 Vigna mungo HOM05D003741 ORTHO05D004247 2.8e-35 151.8 111 67.6
Potri.002G184201 Populus trichocarpa HOM05D003741 ORTHO05D004247 3.7e-35 151.4 113 69.0
Actinidia06418 Actinidia chinensis HOM05D003741 ORTHO05D004247 4.9e-35 151.0 113 65.5
PSO210G2167 Papaver somniferum HOM05D003741 ORTHO05D004247 4.9e-35 151.0 103 73.8
TAR636G2991 Trochodendron aralioides HOM05D003741 ORTHO05D004247 4.9e-35 151.0 113 68.1
CSS0030537 Camellia sinensis var. sinensis HOM05D003741 ORTHO05D004247 6.3e-35 150.6 113 65.5
Medtr7g111060 Medicago truncatula HOM05D003741 ORTHO05D004247 6.3e-35 150.6 111 66.7
Sabra02G0131500 Salix brachista HOM05D003741 ORTHO05D004247 6.3e-35 150.6 113 67.3
TPR.G8367 Trifolium pratense HOM05D003741 ORTHO05D004247 6.3e-35 150.6 111 67.6
Hma1.2p1_0098F.1_g048300 Hydrangea macrophylla HOM05D003741 ORTHO05D004247 1.1e-34 149.8 113 68.1
Phvul.001G220100 Phaseolus vulgaris HOM05D003741 ORTHO05D004247 1.1e-34 149.8 111 65.8
Haze_05172 Corylus avellana HOM05D003741 ORTHO05D004247 1.4e-34 149.4 113 67.3
Ca_09258_v3 Cicer arietinum L. HOM05D003741 ORTHO05D004247 2.4e-34 148.7 111 66.7
Lalb_Chr04g0260241 Lupinus albus HOM05D003741 ORTHO05D004247 2.4e-34 148.7 111 65.8
PSO210G0649 Papaver somniferum HOM05D003741 ORTHO05D004247 2.4e-34 148.7 111 68.5
vmacro02353 Vaccinium macrocarpon HOM05D003741 ORTHO05D004247 2.4e-34 148.7 112 65.2
Cfa004932 Carpinus fangiana HOM05D003741 ORTHO05D004247 3.1e-34 148.3 113 67.3
MELO3C026898.2 Cucumis melo HOM05D003741 ORTHO05D004247 3.1e-34 148.3 100 74.0
Gohir.A11G047400 Gossypium hirsutum HOM05D003741 ORTHO05D004247 3.1e-34 148.3 112 67.0
Gohir.D11G051000 Gossypium hirsutum HOM05D003741 ORTHO05D004247 3.1e-34 148.3 112 67.0
Gorai.007G055400 Gossypium raimondii HOM05D003741 ORTHO05D004247 3.1e-34 148.3 112 67.0
DCAR_030726 Daucus carota HOM05D003741 ORTHO05D004247 4.1e-34 147.9 113 65.5
PSO761G0307 Papaver somniferum HOM05D003741 ORTHO05D004247 4.1e-34 147.9 103 71.8
MD17G1285700 Malus domestica HOM05D003741 ORTHO05D004247 5.4e-34 147.5 108 67.6
Lj1g0024084 Lotus japonicus HOM05D003741 ORTHO05D004247 7.0e-34 147.1 111 68.5
Medtr7g111050 Medicago truncatula HOM05D003741 ORTHO05D004247 7.0e-34 147.1 111 65.8
Aa31LG5G1330 Aethionema arabicum HOM05D003741 ORTHO05D004247 9.2e-34 146.7 113 66.4
Sabra02G0131600 Salix brachista HOM05D003741 ORTHO05D004247 9.2e-34 146.7 112 66.1
THA.LOC104825920 Tarenaya hassleriana HOM05D003741 ORTHO05D004247 9.2e-34 146.7 113 63.7
TWI23G0544 Tripterygium wilfordii HOM05D003741 ORTHO05D004247 9.2e-34 146.7 112 65.2
Ah.08g218400 Amaranthus hybridus HOM05D003741 ORTHO05D004247 1.2e-33 146.4 87 75.9
Lalb_Chr18g0046281 Lupinus albus HOM05D003741 ORTHO05D004247 1.2e-33 146.4 111 64.9
EL10Ac7g18033 Beta vulgaris HOM05D003741 ORTHO05D004247 1.6e-33 146.0 99 67.7
Oeu060888.1 Olea europaea HOM05D003741 ORTHO05D004247 1.6e-33 146.0 98 73.5
Oeu060889.1 Olea europaea HOM05D003741 ORTHO05D004247 1.6e-33 146.0 98 73.5
Hund18513 Selenicereus undatus HOM05D003741 ORTHO05D004247 4.5e-33 144.4 113 63.7
arahy.Tifrunner.gnm1.ann1.8L6AK6 Arachis hypogaea HOM05D003741 ORTHO05D004247 1.0e-32 143.3 112 64.3
CARHR250060 Cardamine hirsuta HOM05D003741 ORTHO05D004247 1.0e-32 143.3 113 64.6
Manes.05G006300 Manihot esculenta HOM05D003741 ORTHO05D004247 1.0e-32 143.3 115 62.6
arahy.Tifrunner.gnm1.ann1.00ZDTM Arachis hypogaea HOM05D003741 ORTHO05D004247 1.3e-32 142.9 112 64.3
Potri.014G109801 Populus trichocarpa HOM05D003741 ORTHO05D004247 1.3e-32 142.9 105 67.6
TAR636G3591 Trochodendron aralioides HOM05D003741 ORTHO05D004247 1.7e-32 142.5 99 71.7
Ah.15g095460 Amaranthus hybridus HOM05D003741 ORTHO05D004247 2.3e-32 142.1 99 64.6
AT4G01610 Arabidopsis thaliana HOM05D003741 ORTHO05D004247 2.3e-32 142.1 113 63.7
A09p01170 Brassica napus HOM05D003741 ORTHO05D004247 2.3e-32 142.1 113 61.9
BraA09t35787Z Brassica rapa HOM05D003741 ORTHO05D004247 2.3e-32 142.1 113 61.9
CAN.G1222.16 Capsicum annuum HOM05D003741 ORTHO05D004247 2.3e-32 142.1 97 71.1
CDE05G0438 Ceratophyllum demersum HOM05D003741 ORTHO05D004247 2.3e-32 142.1 100 69.0
COL.COLO4_23087 Corchorus olitorius HOM05D003741 ORTHO05D004247 2.3e-32 142.1 98 72.4
Gohir.D11G050925 Gossypium hirsutum HOM05D003741 ORTHO05D004247 2.3e-32 142.1 100 70.0
Migut.D00004 Erythranthe guttata HOM05D003741 ORTHO05D004247 2.9e-32 141.7 98 71.4
Aa31LG1G10210 Aethionema arabicum HOM05D003741 ORTHO05D004247 3.8e-32 141.4 111 64.9
AT1G02305 Arabidopsis thaliana HOM05D003741 ORTHO05D004247 3.8e-32 141.4 111 64.9
BcaB01g02127 Brassica carinata HOM05D003741 ORTHO05D004247 3.8e-32 141.4 113 61.9
BcaC02g12465 Brassica carinata HOM05D003741 ORTHO05D004247 3.8e-32 141.4 107 68.2
BcaC06g35601 Brassica carinata HOM05D003741 ORTHO05D004247 3.8e-32 141.4 107 68.2
A08p37710 Brassica napus HOM05D003741 ORTHO05D004247 3.8e-32 141.4 107 68.2
C04p03330 Brassica napus HOM05D003741 ORTHO05D004247 3.8e-32 141.4 107 68.2
C07p13080 Brassica napus HOM05D003741 ORTHO05D004247 3.8e-32 141.4 107 68.2
BolC7t41802H Brassica oleracea HOM05D003741 ORTHO05D004247 3.8e-32 141.4 107 68.2
BraA08t35667Z Brassica rapa HOM05D003741 ORTHO05D004247 3.8e-32 141.4 107 68.2
Thhalv10028753m.g Eutrema salsugineum HOM05D003741 ORTHO05D004247 3.8e-32 141.4 113 61.9
Solyc02g069100.4 Solanum lycopersicum HOM05D003741 ORTHO05D004247 3.8e-32 141.4 97 72.2
Sopen02g018230 Solanum pennellii HOM05D003741 ORTHO05D004247 3.8e-32 141.4 97 72.2
AT1G02300 Arabidopsis thaliana HOM05D003741 ORTHO05D004247 5.0e-32 141.0 107 69.2
BcaC04g24082 Brassica carinata HOM05D003741 ORTHO05D004247 5.0e-32 141.0 113 61.9
C09p01250 Brassica napus HOM05D003741 ORTHO05D004247 5.0e-32 141.0 113 61.9
BolC9t53059H Brassica oleracea HOM05D003741 ORTHO05D004247 5.0e-32 141.0 113 61.9
Carub.0001s0134 Capsella rubella HOM05D003741 ORTHO05D004247 5.0e-32 141.0 111 64.9
CARHR001610 Cardamine hirsuta HOM05D003741 ORTHO05D004247 5.0e-32 141.0 107 69.2
CARHR001830 Cardamine hirsuta HOM05D003741 ORTHO05D004247 5.0e-32 141.0 107 69.2
Prupe.3G000200 Prunus persica HOM05D003741 ORTHO05D004247 5.0e-32 141.0 105 67.6
Solyc02g069090.3 Solanum lycopersicum HOM05D003741 ORTHO05D004247 5.0e-32 141.0 97 72.2
AL1G11630 Arabidopsis lyrata HOM05D003741 ORTHO05D004247 6.6e-32 140.6 111 64.9
AL1G11640 Arabidopsis lyrata HOM05D003741 ORTHO05D004247 6.6e-32 140.6 107 69.2
BcaB03g13517 Brassica carinata HOM05D003741 ORTHO05D004247 6.6e-32 140.6 107 68.2
Manes.01G236900 Manihot esculenta HOM05D003741 ORTHO05D004247 6.6e-32 140.6 107 65.4
Sed0003001 Sechium edule HOM05D003741 ORTHO05D004247 6.6e-32 140.6 97 71.1
BolC4t21970H Brassica oleracea HOM05D003741 ORTHO05D004247 8.6e-32 140.2 106 67.9
FAN23G1381 Fragaria x ananassa HOM05D003741 ORTHO05D004247 8.6e-32 140.2 102 68.6
FAN28G0860 Fragaria x ananassa HOM05D003741 ORTHO05D004247 8.6e-32 140.2 102 68.6
Nitab4.5_0002056g0060 Nicotiana tabacum HOM05D003741 ORTHO05D004247 8.6e-32 140.2 97 70.1
Sp1g01380 Schrenkiella parvula HOM05D003741 ORTHO05D004247 8.6e-32 140.2 107 68.2
MSTRG.21732 Avicennia marina HOM05D003741 ORTHO05D004247 1.1e-31 139.8 107 64.5
Ca_09259_v3 Cicer arietinum L. HOM05D003741 ORTHO05D004247 1.1e-31 139.8 98 71.4
Thhalv10008009m.g Eutrema salsugineum HOM05D003741 ORTHO05D004247 1.1e-31 139.8 107 68.2
RcHm_v2.0_Chr3g0485051 Rosa chinensis HOM05D003741 ORTHO05D004247 1.5e-31 139.4 105 66.7
Sopen02g018190 Solanum pennellii HOM05D003741 ORTHO05D004247 1.5e-31 139.4 97 71.1
Carub.0006s3558 Capsella rubella HOM05D003741 ORTHO05D004247 1.9e-31 139.0 113 61.9
FvH4_1g25910 Fragaria vesca HOM05D003741 ORTHO05D004247 1.9e-31 139.0 102 67.6
GSVIVG01028272001 Vitis vinifera HOM05D003741 ORTHO05D004247 1.9e-31 139.0 112 66.1
AL6G51730 Arabidopsis lyrata HOM05D003741 ORTHO05D004247 2.5e-31 138.7 113 61.9
CANSAT11G2508 Cannabis sativa HOM05D003741 ORTHO05D004247 2.5e-31 138.7 105 65.7
Cc02_g27670 Coffea canephora HOM05D003741 ORTHO05D004247 2.5e-31 138.7 97 71.1
Sed0014336 Sechium edule HOM05D003741 ORTHO05D004247 2.5e-31 138.7 97 71.1
Hund05614 Selenicereus undatus HOM05D003741 ORTHO05D004247 2.5e-31 138.7 115 60.9
CAN.G1222.10 Capsicum annuum HOM05D003741 ORTHO05D004247 3.3e-31 138.3 97 70.1
Nitab4.5_0002463g0040 Nicotiana tabacum HOM05D003741 ORTHO05D004247 3.3e-31 138.3 97 70.1
Sc05g0003530 Simmondsia chinensis HOM05D003741 ORTHO05D004247 3.3e-31 138.3 98 69.4
AUR62001249 Chenopodium quinoa HOM05D003741 ORTHO05D004247 4.3e-31 137.9 99 67.7
AUR62022081 Chenopodium quinoa HOM05D003741 ORTHO05D004247 4.3e-31 137.9 99 67.7
Peaxi162Scf00149g00919 Petunia axillaris HOM05D003741 ORTHO05D004247 5.6e-31 137.5 97 69.1
BcaB01g06137 Brassica carinata HOM05D003741 ORTHO05D004247 1.2e-30 136.3 107 66.4
BolC3t12579H Brassica oleracea HOM05D003741 ORTHO05D004247 1.2e-30 136.3 107 66.4
FAN26G2502 Fragaria x ananassa HOM05D002459 ORTHO05D003006 1.2e-30 136.3 102 67.6
Peaxi162Scf00149g01016 Petunia axillaris HOM05D003741 ORTHO05D004247 1.2e-30 136.3 97 68.0
Psat3g015720 Pisum sativum HOM05D003741 ORTHO05D004247 2.8e-30 135.2 111 60.4
Sp6g01520 Schrenkiella parvula HOM05D003741 ORTHO05D004247 2.8e-30 135.2 113 61.1
Nitab4.5_0003773g0090 Nicotiana tabacum HOM05D001270 ORTHO05D001099 4.7e-30 134.4 97 69.1
CAN.G1222.7 Capsicum annuum HOM05D003741 ORTHO05D004247 1.8e-29 132.5 111 59.5
PGSC0003DMG400010362 Solanum tuberosum HOM05D003741 ORTHO05D004247 1.8e-29 132.5 97 67.0
SGA_v2.0_scaffold80G25671 Striga asiatica HOM05D003741 ORTHO05D004247 2.3e-29 132.1 150 48.7
Solyc02g069110.4 Solanum lycopersicum HOM05D003741 ORTHO05D004247 8.9e-29 130.2 97 66.0
Sopen02g018240 Solanum pennellii HOM05D003741 ORTHO05D004247 8.9e-29 130.2 97 66.0
CAN.G1222.9 Capsicum annuum HOM05D003741 ORTHO05D004247 1.2e-28 129.8 97 66.0
Cc02_g27650 Coffea canephora HOM05D003741 ORTHO05D004247 1.2e-28 129.8 97 63.9
unitig_85.g27192 Utricularia gibba HOM05D000218 ORTHO05D004247 1.8e-26 122.5 96 61.5
CAN.G1222.12 Capsicum annuum HOM05D003741 ORTHO05D004247 5.4e-26 120.9 97 59.8
CAN.G1222.11 Capsicum annuum HOM05D003741 ORTHO05D004247 1.2e-25 119.8 97 58.8
AagrBONN_evm.TU.Sc2ySwM_117.76 Anthoceros agrestis HOM05D003741 ORTHO05D004247 4.6e-25 117.9 98 58.2
C03p00130 Brassica napus HOM05D003741 ORTHO05D004247 7.8e-25 117.1 90 65.6
SMO351G0395 Selaginella moellendorffii HOM05D003741 ORTHO05D004247 7.8e-25 117.1 94 59.6
Pp3c2_6240 Physcomitrium patens HOM05D003741 ORTHO05D004247 1.0e-24 116.7 97 59.8
CBR_g2790 Chara braunii HOM05D003741 ORTHO05D004247 6.6e-24 114.0 93 64.5
Pp3c10_7510 Physcomitrium patens HOM05D003741 ORTHO05D004247 4.3e-23 111.3 97 54.6
Pp3c14_8830 Physcomitrium patens HOM05D003741 ORTHO05D004247 1.4e-21 106.3 97 54.6
unitig_578.g16650 Utricularia gibba HOM05D003741 ORTHO05D004247 5.8e-20 100.9 95 56.8
Mapoly0032s0066 Marchantia polymorpha HOM05D003741 ORTHO05D004247 3.7e-19 98.2 90 54.4
HPP92_017316 Vanilla planifolia HOM05D003741 ORTHO05D004247 8.3e-19 97.1 101 55.4
Psat3g015680 Pisum sativum HOM05D003741 ORTHO05D004247 7.0e-18 94.0 55 78.2
DCAR_002344 Daucus carota HOM05D003741 ORTHO05D004247 1.6e-17 92.8 55 78.2
Cpa.g.sc57.55 Carica papaya HOM05D003741 ORTHO05D004247 3.5e-17 91.7 55 76.4
CAN.G1222.15 Capsicum annuum HOM05D003741 ORTHO05D004247 3.1e-13 78.6 55 63.6
QL01p026795 Quercus lobata HOM05D003741 ORTHO05D004247 7.8e-09 63.9 43 65.1


User provided reference genes

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