Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 1.4e-72 276.2 135 100.0
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 4.9e-38 161.4 92 85.9
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 8.4e-38 160.6 92 84.8
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 8.4e-38 160.6 92 84.8
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 8.4e-38 160.6 92 84.8
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 2.4e-37 159.1 92 83.7
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 3.2e-37 158.7 92 83.7
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 9.2e-37 157.1 92 82.6
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 9.2e-37 157.1 92 82.6
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 9.2e-37 157.1 91 83.5
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 3.5e-36 155.2 92 82.6
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 3.5e-36 155.2 88 85.2
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 3.5e-36 155.2 90 82.2
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 3.5e-36 155.2 89 83.1
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 4.6e-36 154.8 88 85.2
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 6.0e-36 154.5 88 85.2
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 6.0e-36 154.5 92 80.4
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 6.0e-36 154.5 92 80.4
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 7.8e-36 154.1 92 83.7
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 7.8e-36 154.1 92 82.6
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 1.3e-35 153.3 92 82.6
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 1.3e-35 153.3 92 80.4
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.7e-35 152.9 92 81.5
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 1.7e-35 152.9 92 82.6
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 1.7e-35 152.9 92 83.7
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 1.7e-35 152.9 92 83.7
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 2.3e-35 152.5 88 84.1
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 2.3e-35 152.5 92 79.3
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.3e-35 152.5 92 82.6
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.3e-35 152.5 92 82.6
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 3.0e-35 152.1 88 84.1
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 5.1e-35 151.4 92 81.5
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 5.1e-35 151.4 88 83.0
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 6.6e-35 151.0 88 80.7
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 8.6e-35 150.6 92 79.3
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 1.1e-34 150.2 88 80.7
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 1.5e-34 149.8 92 81.5
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 1.5e-34 149.8 92 79.3
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 1.5e-34 149.8 92 81.5
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 1.5e-34 149.8 92 77.2
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 2.5e-34 149.1 92 79.3
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 2.5e-34 149.1 88 83.0
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 2.5e-34 149.1 92 78.3
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 2.5e-34 149.1 88 81.8
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 2.5e-34 149.1 94 75.5
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 2.5e-34 149.1 94 75.5
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 2.5e-34 149.1 92 78.3
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 3.3e-34 148.7 88 80.7
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 3.3e-34 148.7 88 80.7
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 3.3e-34 148.7 88 80.7
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 4.3e-34 148.3 88 81.8
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 5.6e-34 147.9 92 80.4
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 7.3e-34 147.5 89 77.5
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 9.6e-34 147.1 88 81.8
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.2e-33 146.7 113 66.4
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.6e-33 146.4 92 78.3
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 1.6e-33 146.4 92 77.2
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 2.1e-33 146.0 92 77.2
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 2.8e-33 145.6 93 75.3
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 2.8e-33 145.6 91 75.8
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 2.8e-33 145.6 92 77.2
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.6e-33 145.2 91 76.9
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.6e-33 145.2 91 76.9
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 4.7e-33 144.8 92 77.2
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 6.2e-33 144.4 87 78.2
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 8.1e-33 144.1 88 80.7
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.1e-32 143.7 92 76.1
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 1.8e-32 142.9 87 79.3
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 1.8e-32 142.9 89 76.4
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 3.1e-32 142.1 92 76.1
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 3.1e-32 142.1 92 76.1
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 3.1e-32 142.1 92 76.1
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 3.1e-32 142.1 92 73.9
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 3.1e-32 142.1 92 73.9
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 3.1e-32 142.1 92 77.2
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 6.9e-32 141.0 92 75.0
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 6.9e-32 141.0 92 75.0
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 6.9e-32 141.0 92 75.0
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 6.9e-32 141.0 92 75.0
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 8.9e-32 140.6 86 77.9
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 1.2e-31 140.2 88 73.9
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 1.2e-31 140.2 88 76.1
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 1.5e-31 139.8 92 73.9
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 1.5e-31 139.8 95 71.6
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 2.6e-31 139.0 92 73.9
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 2.6e-31 139.0 92 73.9
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 2.6e-31 139.0 92 73.9
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 2.6e-31 139.0 92 73.9
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 2.6e-31 139.0 92 72.8
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 3.4e-31 138.7 92 73.9
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 3.4e-31 138.7 92 73.9
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 3.4e-31 138.7 92 73.9
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 5.8e-31 137.9 90 73.3
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.3e-30 136.7 84 78.6
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.8e-30 135.2 84 77.4
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 1.1e-29 133.7 92 71.7
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 1.1e-29 133.7 92 71.7
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.1e-29 133.7 89 75.3
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.2e-28 130.2 135 54.1
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 3.0e-27 125.6 80 76.2
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 8.7e-27 124.0 92 70.7
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 7.3e-26 120.9 119 54.6
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 9.6e-26 120.6 144 51.4
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 8.1e-25 117.5 73 75.3
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.1e-24 117.1 120 54.2
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 1.8e-24 116.3 68 82.4
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 4.0e-24 115.2 66 83.3
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 3.4e-23 112.1 66 78.8
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 9.9e-23 110.5 66 80.3
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 1.3e-22 110.2 119 56.3
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 2.9e-22 109.0 91 60.4
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 6.4e-22 107.8 69 73.9
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 1.3e-19 100.1 95 61.1
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 7.4e-18 94.4 62 71.0
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 8.1e-17 90.9 95 50.5
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 1.1e-16 90.5 89 58.4
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 1.5e-15 86.7 56 71.4
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 2.9e-14 82.4 83 45.8
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 2.1e-12 76.3 66 63.6
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 2.7e-12 75.9 266 27.8
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 4.6e-12 75.1 72 56.9
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 4.6e-12 75.1 69 52.2
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 2.3e-11 72.8 83 41.0
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 6.7e-11 71.2 72 54.2
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 2.5e-10 69.3 56 62.5
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 1.3e-06 57.0 63 44.4
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 8.4e-06 54.3 49 51.0


User provided reference genes

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