Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 3.7e-54 214.5 102 100.0
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 8.0e-17 90.5 45 77.8
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 1.0e-16 90.1 45 77.8
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.4e-16 89.7 45 75.6
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.4e-16 89.7 45 75.6
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 6.8e-16 87.4 45 75.6
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 1.2e-15 86.7 41 85.4
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.4e-15 84.7 45 73.3
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 5.8e-15 84.3 41 82.9
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 5.8e-15 84.3 45 68.9
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 1.3e-14 83.2 41 82.9
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 1.7e-14 82.8 41 78.0
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 1.7e-14 82.8 41 78.0
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 1.7e-14 82.8 41 80.5
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 2.2e-14 82.4 41 80.5
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 2.2e-14 82.4 41 80.5
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 2.2e-14 82.4 41 75.6
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 2.2e-14 82.4 41 78.0
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 2.9e-14 82.0 41 78.0
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 2.9e-14 82.0 41 78.0
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 2.9e-14 82.0 41 78.0
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 2.9e-14 82.0 41 78.0
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.9e-14 82.0 41 80.5
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.9e-14 82.0 41 80.5
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 3.7e-14 81.6 39 82.1
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 4.9e-14 81.3 45 71.1
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 6.4e-14 80.9 41 73.2
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 6.4e-14 80.9 41 78.0
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 6.4e-14 80.9 41 78.0
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 6.4e-14 80.9 41 78.0
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 6.4e-14 80.9 39 82.1
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 6.4e-14 80.9 41 78.0
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 6.4e-14 80.9 41 78.0
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 8.3e-14 80.5 41 75.6
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 8.3e-14 80.5 41 75.6
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 8.3e-14 80.5 41 75.6
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 8.3e-14 80.5 41 75.6
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 78.0
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 73.2
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 1.1e-13 80.1 39 79.5
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 75.6
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.1e-13 80.1 41 78.0
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 1.4e-13 79.7 41 75.6
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 1.4e-13 79.7 41 75.6
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 1.4e-13 79.7 41 73.2
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 1.8e-13 79.3 41 75.6
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.8e-13 79.3 41 75.6
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 1.8e-13 79.3 41 73.2
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 2.4e-13 79.0 41 75.6
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 2.4e-13 79.0 41 75.6
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 2.4e-13 79.0 41 73.2
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 2.4e-13 79.0 41 70.7
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 2.4e-13 79.0 41 73.2
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 2.4e-13 79.0 41 78.0
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 2.4e-13 79.0 41 73.2
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 3.2e-13 78.6 41 73.2
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 3.2e-13 78.6 41 73.2
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 3.2e-13 78.6 41 75.6
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 3.2e-13 78.6 41 70.7
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 3.2e-13 78.6 41 70.7
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 3.2e-13 78.6 41 73.2
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 3.2e-13 78.6 41 73.2
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 4.1e-13 78.2 41 73.2
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 4.1e-13 78.2 41 73.2
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 4.1e-13 78.2 41 73.2
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 4.1e-13 78.2 41 73.2
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 4.1e-13 78.2 41 73.2
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 5.4e-13 77.8 41 73.2
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 5.4e-13 77.8 41 70.7
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 5.4e-13 77.8 41 73.2
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 7.0e-13 77.4 41 75.6
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 7.0e-13 77.4 41 70.7
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 7.0e-13 77.4 41 70.7
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 7.0e-13 77.4 41 75.6
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 7.0e-13 77.4 41 73.2
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 7.0e-13 77.4 41 73.2
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 7.0e-13 77.4 41 68.3
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 9.2e-13 77.0 41 68.3
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 9.2e-13 77.0 41 73.2
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 1.2e-12 76.6 34 82.4
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.2e-12 76.6 41 75.6
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 1.2e-12 76.6 41 73.2
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 1.2e-12 76.6 41 73.2
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 1.6e-12 76.3 39 71.8
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 1.6e-12 76.3 41 65.9
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 1.6e-12 76.3 41 70.7
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.7e-12 75.5 77 50.6
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 2.7e-12 75.5 41 68.3
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 3.5e-12 75.1 41 68.3
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 4.6e-12 74.7 41 68.3
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 6.0e-12 74.3 39 69.2
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 6.0e-12 74.3 39 71.8
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 2.3e-11 72.4 41 63.4
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 5.0e-11 71.2 41 58.5
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 6.6e-11 70.9 41 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 8.6e-11 70.5 41 61.0
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 8.6e-11 70.5 51 56.9
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 8.6e-11 70.5 39 71.8
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 1.1e-10 70.1 41 61.0
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 1.9e-10 69.3 51 54.9
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 3.3e-10 68.6 41 56.1
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 3.3e-10 68.6 61 50.8
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 4.3e-10 68.2 51 54.9
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 4.3e-10 68.2 51 54.9
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 1.6e-09 66.2 32 75.0
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 1.4e-08 63.2 41 51.2
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 1.5e-07 59.7 51 51.0
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 1.3e-06 56.6 39 48.7
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 2.2e-06 55.8 39 53.8
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 2.9e-06 55.5 39 53.8


User provided reference genes

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