Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 1.1e-89 333.2 164 100.0
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 1.0e-45 187.2 135 71.9
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 3.8e-45 185.3 135 69.6
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 5.6e-44 181.4 135 67.4
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 7.3e-44 181.0 134 68.7
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 1.2e-43 180.3 136 66.9
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 1.6e-43 179.9 134 69.4
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 2.1e-43 179.5 134 66.4
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 2.8e-43 179.1 135 66.7
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 2.8e-43 179.1 135 66.7
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 3.6e-43 178.7 135 66.7
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 3.0e-42 175.6 135 68.1
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 5.2e-42 174.9 135 67.4
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 5.2e-42 174.9 135 67.4
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 6.8e-42 174.5 134 67.2
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.2e-41 173.7 135 64.4
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 1.2e-41 173.7 135 66.7
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 3.4e-41 172.2 135 65.9
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 3.4e-41 172.2 135 65.9
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 4.4e-41 171.8 135 65.9
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 4.4e-41 171.8 135 66.7
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 5.8e-41 171.4 135 65.9
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 5.8e-41 171.4 134 65.7
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 9.8e-41 170.6 135 67.4
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 2.2e-40 169.5 135 66.7
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 6.4e-40 167.9 145 62.8
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 9.2e-39 164.1 135 63.7
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 6.0e-38 161.4 140 62.1
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 3.0e-37 159.1 140 61.4
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 5.0e-37 158.3 130 62.3
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 8.6e-37 157.5 140 60.7
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 1.1e-36 157.1 140 60.0
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 1.9e-36 156.4 134 59.7
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 5.6e-36 154.8 140 60.0
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 9.5e-36 154.1 140 60.0
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 2.1e-35 152.9 139 57.6
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 2.1e-35 152.9 135 59.3
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 4.0e-34 148.7 134 56.7
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 6.8e-34 147.9 140 57.1
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 8.9e-34 147.5 134 57.5
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 2.9e-32 142.5 133 58.6
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 4.9e-32 141.7 133 57.9
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 1.9e-31 139.8 125 63.2
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 2.4e-31 139.4 133 57.9
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.2e-31 139.0 136 57.4
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 4.1e-31 138.7 153 49.0
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 9.2e-31 137.5 117 65.0
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 3.5e-30 135.6 134 54.5
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 1.0e-29 134.0 113 62.8
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.9e-29 132.1 115 60.9
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 2.8e-27 125.9 113 59.3
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 1.4e-26 123.6 187 41.7
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.5e-25 120.2 181 43.1
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 2.6e-25 119.4 145 47.6
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 9.9e-25 117.5 133 48.1
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 8.3e-24 114.4 125 50.4
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 2.4e-23 112.8 111 52.3
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 4.6e-22 108.6 140 47.9
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 4.3e-20 102.1 144 47.9
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 2.1e-19 99.8 66 74.2
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 2.1e-19 99.8 167 38.3
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 2.8e-19 99.4 68 69.1
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 3.6e-19 99.0 73 71.2
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 3.6e-19 99.0 64 75.0
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 3.6e-19 99.0 76 65.8
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.8e-18 96.7 89 59.6
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 3.1e-18 95.9 64 75.0
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 8.9e-18 94.4 64 67.2
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 5.8e-17 91.7 137 40.1
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 5.8e-17 91.7 64 71.9
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 1.3e-16 90.5 59 72.9
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 2.9e-16 89.4 65 66.2
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 3.8e-16 89.0 66 68.2
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 4.9e-16 88.6 64 67.2
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 4.2e-15 85.5 74 56.8
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 4.2e-15 85.5 60 70.0
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 5.4e-15 85.1 71 64.8
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 9.2e-15 84.3 61 60.7
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 2.7e-14 82.8 65 61.5
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 1.0e-13 80.9 56 71.4
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 2.3e-13 79.7 54 72.2
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 2.3e-13 79.7 59 66.1
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 8.7e-13 77.8 53 71.7
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 1.1e-12 77.4 62 61.3
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 1.1e-12 77.4 72 52.8
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 1.5e-12 77.0 47 72.3
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 1.5e-12 77.0 47 72.3
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 3.3e-12 75.9 167 32.9
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 9.6e-12 74.3 57 59.6
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 8.1e-11 71.2 60 56.7
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 2.4e-10 69.7 69 55.1
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 9.0e-10 67.8 54 59.3
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 5.8e-09 65.1 139 36.0
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 7.6e-09 64.7 57 64.9
TAR365G0305 Trochodendron aralioides HOM05D007572 ORTHO05D009535 2.2e-08 63.2 56 60.7
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 6.4e-08 61.6 55 60.0
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 4.2e-07 58.9 54 51.9
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.7e-06 56.2 96 40.6


User provided reference genes

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