Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02518 Aquilegia oxysepala HOM05D007830 ORTHO05D009947 1.6e-184 650.2 623 100.0
Hma1.2p1_0052F.1_g030410 Hydrangea macrophylla HOM05D007830 ORTHO05D009947 4.7e-59 233.4 623 37.1
Potri.005G003200 Populus trichocarpa HOM05D007830 ORTHO05D009947 7.7e-54 216.1 624 60.4
Manes.09G180800 Manihot esculenta HOM05D007830 ORTHO05D009947 5.0e-53 213.4 621 62.3
MSTRG.16426 Avicennia marina HOM05D007830 ORTHO05D009947 2.8e-51 207.6 621 59.4
TWI56G0273 Tripterygium wilfordii HOM05D007830 ORTHO05D009947 1.4e-50 205.3 618 55.7
Duzib128G1385 Durio zibethinus HOM05D007830 ORTHO05D009947 1.8e-50 204.9 589 52.3
Sabra05G0014700 Salix brachista HOM05D007830 ORTHO05D009947 6.8e-50 203.0 622 56.9
Sabra05G0000600 Salix brachista HOM05D007830 ORTHO05D009947 2.0e-49 201.4 622 57.6
Phvul.007G204600 Phaseolus vulgaris HOM05D007830 ORTHO05D009947 2.4e-47 194.5 626 53.0
Lj5g0007590 Lotus japonicus HOM05D007830 ORTHO05D009947 5.4e-47 193.4 622 57.6
Potri.013G002800 Populus trichocarpa HOM05D007830 ORTHO05D009947 7.0e-47 193.0 623 62.4
DCAR_029288 Daucus carota HOM05D007830 ORTHO05D009947 4.5e-46 190.3 618 51.3
Peaxi162Scf00357g00014 Petunia axillaris HOM05D007830 ORTHO05D009947 4.5e-46 190.3 618 46.1
SGA_v2.0_scaffold117G32413 Striga asiatica HOM05D007830 ORTHO05D009947 1.0e-45 189.1 623 60.8
Migut.B00878 Erythranthe guttata HOM05D007830 ORTHO05D009947 3.3e-44 184.1 623 60.2
Dinv24509 Davidia involucrata HOM05D007830 ORTHO05D009947 4.3e-44 183.7 622 56.9
Glyma.20G092100 Glycine max HOM05D007830 ORTHO05D009947 7.3e-44 183.0 624 49.7
Actinidia11685 Actinidia chinensis HOM05D007830 ORTHO05D009947 7.5e-41 172.9 620 45.8
Ca_10196_v3 Cicer arietinum L. HOM05D007830 ORTHO05D009947 7.5e-41 172.9 619 53.8
Gorai.007G309100 Gossypium raimondii HOM05D007830 ORTHO05D009947 1.7e-40 171.8 353 55.5
Gohir.D11G285900 Gossypium hirsutum HOM05D007830 ORTHO05D009947 2.9e-40 171.0 353 55.5
Psat6g155440 Pisum sativum HOM05D007830 ORTHO05D009947 1.4e-39 168.7 624 53.7
PGR031G1570 Punica granatum HOM05D007830 ORTHO05D009947 1.4e-39 168.7 619 53.8
Lalb_Chr18g0046201 Lupinus albus HOM05D007830 ORTHO05D009947 7.0e-39 166.4 199 45.7
TPR.G2587 Trifolium pratense HOM05D007830 ORTHO05D009947 1.6e-38 165.2 625 45.4
Cc02_g35800 Coffea canephora HOM05D007830 ORTHO05D009947 1.0e-37 162.5 623 51.0
Sed0014604 Sechium edule HOM05D007830 ORTHO05D009947 1.3e-37 162.2 616 57.8
VMungo0720G1493 Vigna mungo HOM05D007830 ORTHO05D009947 6.6e-37 159.8 626 56.5
Medtr1g484840 Medicago truncatula HOM05D007830 ORTHO05D009947 4.7e-35 153.7 620 45.0
PSO761G0258 Papaver somniferum HOM05D007830 ORTHO05D009947 4.7e-35 153.7 623 59.1
QL03p010498 Quercus lobata HOM05D007830 ORTHO05D009947 1.4e-34 152.1 622 57.1
Zm00001eb060630 Zea mays HOM05D007830 ORTHO05D009947 1.4e-34 152.1 619 45.4
Cfa006760 Carpinus fangiana HOM05D007830 ORTHO05D009947 3.1e-34 151.0 623 56.5
QL03p010264 Quercus lobata HOM05D007830 ORTHO05D009947 4.0e-34 150.6 622 55.3
MD04G1187000 Malus domestica HOM05D007830 ORTHO05D009947 9.8e-33 146.0 621 55.4
PSO210G0421 Papaver somniferum HOM05D007830 ORTHO05D009947 1.7e-32 145.2 623 55.4
CiPaw.07G037200 Carya illinoinensis HOM05D007830 ORTHO05D009947 2.2e-32 144.8 618 39.6
Nitab4.5_0005904g0050 Nicotiana tabacum HOM05D007830 ORTHO05D009947 3.2e-31 141.0 620 36.0
unitig_578.g15943 Utricularia gibba HOM05D007830 ORTHO05D009947 3.2e-31 141.0 623 54.4
Thecc.05G329100 Theobroma cacao HOM05D007830 ORTHO05D009947 7.0e-31 139.8 618 41.4
Lj5P319T39 Lonicera japonica HOM05D007830 ORTHO05D009947 9.2e-31 139.4 609 60.1
MBI06_g27503_MAGBIO Magnolia biondii HOM05D007830 ORTHO05D009947 1.2e-30 139.0 621 52.8
AUR62000469 Chenopodium quinoa HOM05D007830 ORTHO05D009947 2.0e-30 138.3 634 36.4
Rhsim11G0102200 Rhododendron simsii HOM05D007830 ORTHO05D009947 2.7e-30 137.9 623 46.7
AUR62006810 Chenopodium quinoa HOM05D007830 ORTHO05D009947 4.6e-30 137.1 624 44.2
Nn3g21915 Nelumbo nucifera HOM05D007830 ORTHO05D009947 1.7e-29 135.2 331 68.0
Haze_03995 Corylus avellana HOM05D007830 ORTHO05D009947 2.3e-29 134.8 613 55.5
ClCG10G018110 Citrullus lanatus HOM05D007830 ORTHO05D009947 8.6e-29 132.9 352 47.7
Oeu029182.1 Olea europaea HOM05D007830 ORTHO05D009947 5.6e-28 130.2 621 55.2
COL.COLO4_05513 Corchorus olitorius HOM05D007830 ORTHO05D009947 2.1e-27 128.3 616 40.7
Lsat_1_v5_gn_7_63920 Lactuca sativa HOM05D007830 ORTHO05D009947 1.5e-25 122.1 623 37.6
Prupe.6G305500 Prunus persica HOM05D007830 ORTHO05D009947 1.3e-24 119.0 623 58.7
FAN02G3946 Fragaria x ananassa HOM05D007830 ORTHO05D009947 3.7e-24 117.5 623 57.9
Ah.10g026910 Amaranthus hybridus HOM05D007830 ORTHO05D009947 8.3e-24 116.3 623 57.8
CAN.G1248.21 Capsicum annuum HOM05D007830 ORTHO05D009947 8.3e-24 116.3 619 35.9
FAN05G5807 Fragaria x ananassa HOM05D007830 ORTHO05D009947 1.4e-23 115.5 623 58.1
Atru.chr12.1550 Acer truncatum HOM05D007830 ORTHO05D009947 9.2e-23 112.8 111 45.9
CANSAT54G0214 Cannabis sativa HOM05D007830 ORTHO05D009947 1.6e-22 112.1 620 49.0
FAN09G0226 Fragaria x ananassa HOM05D007830 ORTHO05D009947 2.7e-22 111.3 623 57.9
RcHm_v2.0_Chr3g0458391 Rosa chinensis HOM05D007830 ORTHO05D009947 4.6e-22 110.5 623 57.3
GSVIVG01031321001 Vitis vinifera HOM05D007830 ORTHO05D009947 6.0e-22 110.2 107 56.1
MELO3C009562.2 Cucumis melo HOM05D007830 ORTHO05D009947 1.0e-21 109.4 118 48.3
Sopen01g044630 Solanum pennellii HOM05D007830 ORTHO05D009947 1.0e-21 109.4 105 50.5
FAN14G2917 Fragaria x ananassa HOM05D007830 ORTHO05D009947 3.0e-21 107.8 110 48.2
HanXRQChr03g0088351 Helianthus annuus HOM05D007830 ORTHO05D009947 5.1e-21 107.1 627 37.2
FvH4_6g08430 Fragaria vesca HOM05D007830 ORTHO05D009947 6.6e-21 106.7 110 47.3
Hund21836 Selenicereus undatus HOM05D007830 ORTHO05D009947 6.6e-21 106.7 113 48.7
Ciclev10011168m.g Citrus clementina HOM05D007830 ORTHO05D009947 8.6e-21 106.3 111 46.8
CsaV3_3G038190 Cucumis sativus L. HOM05D007830 ORTHO05D009947 1.5e-20 105.5 117 47.0
PGSC0003DMG400018287 Solanum tuberosum HOM05D007830 ORTHO05D009947 2.5e-20 104.8 110 46.4
Eucgr.H01319 Eucalyptus grandis HOM05D007830 ORTHO05D009947 7.3e-20 103.2 114 46.5
Nitab4.5_0002485g0040 Nicotiana tabacum HOM05D007830 ORTHO05D009947 7.3e-20 103.2 105 48.6
arahy.Tifrunner.gnm1.ann1.B5RE77 Arachis hypogaea HOM05D007830 ORTHO05D009947 1.2e-19 102.4 112 46.4
Actinidia09334 Actinidia chinensis HOM05D007830 ORTHO05D009947 3.6e-19 100.9 94 50.0
Glyma.20G092800 Glycine max HOM05D007830 ORTHO05D009947 8.9e-18 96.3 106 47.2
Gohir.A11G275500 Gossypium hirsutum HOM05D007830 ORTHO05D009947 9.9e-17 92.8 125 40.8
CDE05G0555 Ceratophyllum demersum HOM05D007830 ORTHO05D009947 2.9e-16 91.3 362 40.6
Os03g0795400 Oryza sativa ssp. japonica HOM05D007830 ORTHO05D009947 1.4e-15 89.0 110 39.1
MD12G1200400 Malus domestica HOM05D007830 ORTHO05D009947 5.1e-13 80.5 89 44.9
ATR0796G327 Amborella trichopoda HOM05D007830 ORTHO05D009947 4.3e-12 77.4 89 44.9
Solyc01g101150.3 Solanum lycopersicum HOM05D007830 ORTHO05D009947 1.6e-11 75.5 70 52.9
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 2.4e-07 61.6 165 25.5
Nitab4.5_0003027g0060 Nicotiana tabacum HOM05D006218 ORTHO05D007338 2.4e-07 61.6 152 24.3
Ca_01065_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 7.1e-07 60.1 170 25.3
SEGI_21341 Sequoiadendron giganteum HOM05D000891 ORTHO05D002107 9.3e-07 59.7 88 37.5
SGA_v2.0_scaffold8G04573 Striga asiatica HOM05D000424 ORTHO05D002854 4.6e-06 57.4 146 23.3


User provided reference genes

Program Settings