Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02507 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 8.5e-56 219.9 99 100.0
CSS0000269 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 4.3e-15 84.7 85 44.7
CSS0014844 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 4.3e-15 84.7 85 44.7
CSS0046368 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 4.3e-15 84.7 85 44.7
CSS0048223 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 4.3e-15 84.7 85 44.7
EL10Ac4g08094 Beta vulgaris HOM05D002739 ORTHO05D002877 1.2e-14 83.2 85 45.9
Manes.11G031500 Manihot esculenta HOM05D002739 ORTHO05D002877 1.6e-14 82.8 85 45.9
Cc02_g29460 Coffea canephora HOM05D002739 ORTHO05D002877 2.1e-14 82.4 85 42.4
Potri.001G023200 Populus trichocarpa HOM05D002739 ORTHO05D002877 2.1e-14 82.4 96 41.7
TAR623G0756 Trochodendron aralioides HOM05D002739 ORTHO05D002877 3.6e-14 81.6 99 39.4
Manes.04G135500 Manihot esculenta HOM05D002739 ORTHO05D002877 1.1e-13 80.1 85 43.5
Nn2g15045 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.3e-13 79.0 98 41.8
SGA_v2.0_scaffold24G10703 Striga asiatica HOM05D002739 ORTHO05D002877 3.1e-13 78.6 88 39.8
PSO339G3199 Papaver somniferum HOM05D002739 ORTHO05D002877 4.0e-13 78.2 85 38.8
PGR031G3191 Punica granatum HOM05D002739 ORTHO05D002877 4.0e-13 78.2 99 36.4
AL8G32240 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 5.2e-13 77.8 87 42.5
Dinv36202 Davidia involucrata HOM05D002739 ORTHO05D002877 5.2e-13 77.8 96 38.5
THA.LOC104826487 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 5.2e-13 77.8 94 40.4
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 6.8e-13 77.4 85 42.4
QL04p013222 Quercus lobata HOM05D002739 ORTHO05D002877 6.8e-13 77.4 85 41.2
PSO339G1495 Papaver somniferum HOM05D002739 ORTHO05D002877 8.9e-13 77.0 85 41.2
Sabra01G0017600 Salix brachista HOM05D002739 ORTHO05D002877 8.9e-13 77.0 97 34.0
Actinidia19441 Actinidia chinensis HOM05D002739 ORTHO05D002877 1.2e-12 76.6 85 42.4
PSO384G3480 Papaver somniferum HOM05D002739 ORTHO05D002877 1.2e-12 76.6 85 38.8
Rhsim07G0062000 Rhododendron simsii HOM05D002739 ORTHO05D002877 1.5e-12 76.3 85 41.2
Haze_23193 Corylus avellana HOM05D002739 ORTHO05D002877 2.0e-12 75.9 87 39.1
Sc10g0004220 Simmondsia chinensis HOM05D002739 ORTHO05D002877 2.0e-12 75.9 96 36.5
AT4G30880 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 2.6e-12 75.5 85 41.2
PSO384G0435 Papaver somniferum HOM05D002739 ORTHO05D002877 2.6e-12 75.5 99 39.4
Hund15707 Selenicereus undatus HOM05D002739 ORTHO05D002877 2.6e-12 75.5 99 36.4
Manes.14G006000 Manihot esculenta HOM05D002739 ORTHO05D002877 3.4e-12 75.1 85 38.8
PSO384G1774 Papaver somniferum HOM05D002739 ORTHO05D002877 3.4e-12 75.1 96 41.7
PSO384G3657 Papaver somniferum HOM05D002739 ORTHO05D002877 3.4e-12 75.1 96 41.7
Oeu027475.1 Olea europaea HOM05D002739 ORTHO05D002877 4.4e-12 74.7 86 37.2
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 4.4e-12 74.7 99 40.4
Potri.001G023300 Populus trichocarpa HOM05D002739 ORTHO05D002877 4.4e-12 74.7 87 35.6
Nn7g36463 Nelumbo nucifera HOM05D002739 ORTHO05D002877 5.8e-12 74.3 100 38.0
Carub.0007s0967 Capsella rubella HOM05D002739 ORTHO05D002877 7.5e-12 73.9 85 42.4
CiPaw.13G010100 Carya illinoinensis HOM05D002739 ORTHO05D002877 7.5e-12 73.9 85 41.2
HanXRQChr14g0441021 Helianthus annuus HOM05D002739 ORTHO05D002877 7.5e-12 73.9 84 44.0
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 9.9e-12 73.6 99 37.4
Ah.12g065190 Amaranthus hybridus HOM05D002739 ORTHO05D002877 1.3e-11 73.2 81 42.0
Thhalv10026851m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 1.3e-11 73.2 85 42.4
QL04p013260 Quercus lobata HOM05D002739 ORTHO05D002877 1.3e-11 73.2 85 40.0
Aqoxy2G00284 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 1.7e-11 72.8 97 36.1
MSTRG.21276 Avicennia marina HOM05D002739 ORTHO05D002877 1.7e-11 72.8 85 41.2
PSO384G3631 Papaver somniferum HOM05D002739 ORTHO05D002877 1.7e-11 72.8 85 42.4
DCAR_022358 Daucus carota HOM05D002739 ORTHO05D002877 2.9e-11 72.0 81 40.7
Actinidia16366 Actinidia chinensis HOM05D002739 ORTHO05D002877 3.7e-11 71.6 98 35.7
AT5G56480 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 3.7e-11 71.6 87 37.9
Sp7g28750 Schrenkiella parvula HOM05D002739 ORTHO05D002877 3.7e-11 71.6 85 40.0
AL7G21220 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 4.9e-11 71.2 85 40.0
BcaB03g12664 Brassica carinata HOM05D002739 ORTHO05D002877 4.9e-11 71.2 92 38.0
BcaC09g51875 Brassica carinata HOM05D002739 ORTHO05D002877 4.9e-11 71.2 85 40.0
QL04p013297 Quercus lobata HOM05D002739 ORTHO05D002877 6.4e-11 70.9 85 38.8
Sabra01G0017500 Salix brachista HOM05D002739 ORTHO05D002877 6.4e-11 70.9 93 38.7
THA.LOC104826714 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 6.4e-11 70.9 97 39.2
AL1G46440 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 8.3e-11 70.5 100 36.0
AT1G32280 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 8.3e-11 70.5 100 37.0
ECA238G2259 Erigeron canadensis HOM05D002739 ORTHO05D002877 8.3e-11 70.5 84 39.3
CARHR238780 Cardamine hirsuta HOM05D002739 ORTHO05D002877 1.1e-10 70.1 85 41.2
FvH4_7g02210 Fragaria vesca HOM05D002739 ORTHO05D002877 1.1e-10 70.1 85 40.0
HanXRQChr01g0020811 Helianthus annuus HOM05D002739 ORTHO05D002877 1.1e-10 70.1 84 41.7
Hma1.2p1_0817F.1_g223085 Hydrangea macrophylla HOM05D002739 ORTHO05D002877 1.1e-10 70.1 94 38.3
Hma1.2p1_2313F.1_g319610 Hydrangea macrophylla HOM05D002739 ORTHO05D002877 1.1e-10 70.1 94 38.3
PSO384G1869 Papaver somniferum HOM05D002739 ORTHO05D002877 1.1e-10 70.1 85 40.0
THA.LOC104819118 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 1.1e-10 70.1 92 41.3
TAR623G1716 Trochodendron aralioides HOM05D002739 ORTHO05D002877 1.1e-10 70.1 95 35.8
Prupe.2G028300 Prunus persica HOM05D002739 ORTHO05D002877 1.4e-10 69.7 85 37.6
TWI38G1066 Tripterygium wilfordii HOM05D002739 ORTHO05D002877 1.4e-10 69.7 87 35.6
FAN10G1712 Fragaria x ananassa HOM05D002739 ORTHO05D002877 1.9e-10 69.3 85 40.0
Manes.14G006100 Manihot esculenta HOM05D002739 ORTHO05D002877 1.9e-10 69.3 85 35.3
Prupe.2G028100 Prunus persica HOM05D002739 ORTHO05D002877 1.9e-10 69.3 90 32.2
PGR031G2149 Punica granatum HOM05D002739 ORTHO05D002877 1.9e-10 69.3 85 38.8
QL04p013280 Quercus lobata HOM05D002739 ORTHO05D002877 1.9e-10 69.3 85 40.0
Aqoxy2G00281 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 3.2e-10 68.6 87 33.3
AT4G33550 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 3.2e-10 68.6 99 37.4
BcaC01g00985 Brassica carinata HOM05D002739 ORTHO05D002877 4.1e-10 68.2 99 34.3
Nn7g36442 Nelumbo nucifera HOM05D002739 ORTHO05D002877 4.1e-10 68.2 87 35.6
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 4.1e-10 68.2 87 35.6
Nn7g38448 Nelumbo nucifera HOM05D002739 ORTHO05D002877 4.1e-10 68.2 87 35.6
Sp7g31290 Schrenkiella parvula HOM05D002739 ORTHO05D002877 5.4e-10 67.8 99 35.4
Thhalv10026604m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 7.1e-10 67.4 94 36.2
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 7.1e-10 67.4 99 33.3
BcaNung03432 Brassica carinata HOM05D002739 ORTHO05D002877 9.2e-10 67.0 84 39.3
A01p07300 Brassica napus HOM05D002739 ORTHO05D002877 9.2e-10 67.0 84 38.1
BraA01t00679Z Brassica rapa HOM05D002739 ORTHO05D002877 9.2e-10 67.0 84 38.1
CARHR241650 Cardamine hirsuta HOM05D002739 ORTHO05D002877 9.2e-10 67.0 94 35.1
Eucgr.G03260 Eucalyptus grandis HOM05D002739 ORTHO05D002877 9.2e-10 67.0 85 36.5
BcaB03g12794 Brassica carinata HOM05D002739 ORTHO05D002877 1.2e-09 66.6 99 36.4
QL04p013227 Quercus lobata HOM05D002739 ORTHO05D002877 1.2e-09 66.6 77 39.0
AL7G17970 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 1.6e-09 66.2 99 34.3
BcaB03g12793 Brassica carinata HOM05D002739 ORTHO05D002877 1.6e-09 66.2 99 34.3
BcaC01g01134 Brassica carinata HOM05D002739 ORTHO05D002877 2.1e-09 65.9 84 38.1
BolC3t21155H Brassica oleracea HOM05D002739 ORTHO05D002877 2.1e-09 65.9 84 38.1
Zm00001eb369440 Zea mays HOM05D002739 ORTHO05D002877 2.1e-09 65.9 85 37.6
Aqoxy2G00287 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 2.7e-09 65.5 88 34.1
C01p08060 Brassica napus HOM05D002739 ORTHO05D002877 2.7e-09 65.5 84 36.9
Ciclev10017446m.g Citrus clementina HOM05D002739 ORTHO05D002877 2.7e-09 65.5 76 38.2
Thecc.09G243000 Theobroma cacao HOM05D002739 ORTHO05D002877 2.7e-09 65.5 99 33.3
AUR62037242 Chenopodium quinoa HOM05D000453 ORTHO05D000387 3.5e-09 65.1 85 35.3
ECA236G2864 Erigeron canadensis HOM05D002739 ORTHO05D002877 3.5e-09 65.1 76 40.8
PSO339G0568 Papaver somniferum HOM05D002739 ORTHO05D002877 3.5e-09 65.1 85 34.1
Ciclev10017233m.g Citrus clementina HOM05D002739 ORTHO05D002877 4.6e-09 64.7 85 35.3
MD02G1296400 Malus domestica HOM05D002739 ORTHO05D002877 4.6e-09 64.7 81 38.3
vmacro13721 Vaccinium macrocarpon HOM05D002739 ORTHO05D002877 6.0e-09 64.3 81 38.3
BolC1t00795H Brassica oleracea HOM05D002739 ORTHO05D002877 7.8e-09 63.9 81 38.3
Duzib168G0958 Durio zibethinus HOM05D002739 ORTHO05D002877 7.8e-09 63.9 74 37.8
MBI13_g04764_MAGBIO Magnolia biondii HOM05D002739 ORTHO05D002877 7.8e-09 63.9 86 36.0
QL04p013244 Quercus lobata HOM05D002739 ORTHO05D002877 7.8e-09 63.9 85 34.1
Aa31LG2G19500 Aethionema arabicum HOM05D002739 ORTHO05D002877 1.0e-08 63.5 81 40.7
A10p13840 Brassica napus HOM05D002739 ORTHO05D002877 1.0e-08 63.5 85 34.1
BraA10t43477Z Brassica rapa HOM05D002739 ORTHO05D002877 1.0e-08 63.5 85 34.1
CARHR270120 Cardamine hirsuta HOM05D002739 ORTHO05D002877 1.3e-08 63.2 87 35.6
Migut.D00796 Erythranthe guttata HOM05D002739 ORTHO05D002877 1.3e-08 63.2 81 40.7
arahy.Tifrunner.gnm1.ann1.7A4EFU Arachis hypogaea HOM05D018715 ORTHO05D002877 1.7e-08 62.8 93 33.3
arahy.Tifrunner.gnm1.ann1.K6R24J Arachis hypogaea HOM05D018715 ORTHO05D002877 1.7e-08 62.8 93 33.3
Carub.0001s3061 Capsella rubella HOM05D002739 ORTHO05D002877 1.7e-08 62.8 85 38.8
PSO384G1879 Papaver somniferum HOM05D002739 ORTHO05D002877 1.7e-08 62.8 85 34.1
Ciclev10017226m.g Citrus clementina HOM05D002739 ORTHO05D002877 2.3e-08 62.4 93 33.3
BolC9t57655H Brassica oleracea HOM05D002739 ORTHO05D002877 3.0e-08 62.0 85 34.1
Ciclev10017249m.g Citrus clementina HOM05D002739 ORTHO05D002877 3.0e-08 62.0 73 38.4
Nn7g36467 Nelumbo nucifera HOM05D002739 ORTHO05D002877 3.0e-08 62.0 93 34.4
Zm00001eb419150 Zea mays HOM05D042461 ORTHO05D002877 3.0e-08 62.0 97 33.0
C03p88470 Brassica napus HOM05D002739 ORTHO05D002877 3.9e-08 61.6 84 36.9
Zm00001eb138660 Zea mays HOM05D002739 ORTHO05D002877 3.9e-08 61.6 65 47.7
Atru.chr6.1312 Acer truncatum HOM05D002739 ORTHO05D002877 5.1e-08 61.2 99 34.3
BcaB05g22276 Brassica carinata HOM05D002739 ORTHO05D002877 5.1e-08 61.2 87 34.5
Aa31sc407G10 Aethionema arabicum HOM05D002739 ORTHO05D002877 6.6e-08 60.8 85 35.3
Aqoxy2G00278 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 8.6e-08 60.5 82 36.6
Ciclev10018012m.g Citrus clementina HOM05D002739 ORTHO05D002877 8.6e-08 60.5 72 37.5
Migut.D00661 Erythranthe guttata HOM05D002739 ORTHO05D002877 8.6e-08 60.5 85 35.3
AUR62037241 Chenopodium quinoa HOM05D002739 ORTHO05D002877 1.1e-07 60.1 100 34.0
Lj1g0028228 Lotus japonicus HOM05D002739 ORTHO05D002877 1.5e-07 59.7 88 37.5
EL10Ac2g02872 Beta vulgaris HOM05D002739 ORTHO05D002877 2.5e-07 58.9 81 35.8
Os03g0369100 Oryza sativa ssp. japonica HOM05D002739 ORTHO05D002877 2.5e-07 58.9 86 38.4
TWI74G0698 Tripterygium wilfordii HOM05D002739 ORTHO05D002877 2.5e-07 58.9 87 41.4
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 3.3e-07 58.5 85 32.9
AUR62026812 Chenopodium quinoa HOM05D002739 ORTHO05D002877 4.3e-07 58.2 74 39.2
Lj3g0013733 Lotus japonicus HOM05D018715 ORTHO05D025661 5.6e-07 57.8 94 35.1
QL01p026933 Quercus lobata HOM05D002739 ORTHO05D002877 5.6e-07 57.8 94 34.0
Os01g0800600 Oryza sativa ssp. japonica HOM05D002739 ORTHO05D002877 7.3e-07 57.4 87 33.3
COL.COLO4_04118 Corchorus olitorius HOM05D002739 ORTHO05D002877 9.5e-07 57.0 57 40.4
Ca_11246_v3 Cicer arietinum L. HOM05D002739 ORTHO05D002877 1.2e-06 56.6 94 33.0
GSVIVG01000856001 Vitis vinifera HOM05D002739 ORTHO05D002877 1.2e-06 56.6 71 36.6
GSVIVG01000855001 Vitis vinifera HOM05D002739 ORTHO05D002877 2.1e-06 55.8 71 38.0
Ciclev10017652m.g Citrus clementina HOM05D002739 ORTHO05D002877 3.6e-06 55.1 70 37.1
Aqoxy1G01092 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 4.7e-06 54.7 93 32.3
C09p48080 Brassica napus HOM05D002739 ORTHO05D002877 6.2e-06 54.3 81 32.1


User provided reference genes

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